RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 TYMSP04818 313 aa10.98□□□□□ -0.65
HPS3-201ENST00000296051 WNT2P09544 360 aa10.98□□□□□ -0.65
HPS3-201ENST00000296051 YPEL2Q96QA6 119 aa10.98□□□□□ -0.65
HPS3-201ENST00000296051 SETD2Q9BYW2 2564 aaPredicted RBP10.97□□□□□ -0.65
HPS3-201ENST00000296051 WT1P19544 449 aaPredicted RBP10.97□□□□□ -0.65
HPS3-201ENST00000296051 DLX6P56179 175 aa10.97□□□□□ -0.65
HPS3-201ENST00000296051 UBE2V1Q13404 147 aa10.97□□□□□ -0.65
HPS3-201ENST00000296051 SRSF7Q16629 238 aaKnown RBP eCLIP10.97□□□□□ -0.65
HPS3-201ENST00000296051 CD177Q8N6Q3 437 aa10.97□□□□□ -0.65
HPS3-201ENST00000296051 NUP35Q8NFH5 326 aa10.97□□□□□ -0.65
HPS3-201ENST00000296051 C20orf144Q9BQM9 153 aa10.97□□□□□ -0.65
HPS3-201ENST00000296051 C9JCJ5 164 aa10.97□□□□□ -0.65
HPS3-201ENST00000296051 ADIPOQQ15848 244 aa10.97□□□□□ -0.65
HPS3-201ENST00000296051 FOXL2NBQ6ZUU3 175 aa10.97□□□□□ -0.65
HPS3-201ENST00000296051 Q96MF0 132 aa10.97□□□□□ -0.65
HPS3-201ENST00000296051 PPIFP30405 207 aaKnown RBP10.97□□□□□ -0.65
HPS3-201ENST00000296051 DLX1P56177 255 aa10.97□□□□□ -0.65
HPS3-201ENST00000296051 CACNG7P62955 275 aa10.97□□□□□ -0.65
HPS3-201ENST00000296051 PHLDA3Q9Y5J5 127 aa10.97□□□□□ -0.65
HPS3-201ENST00000296051 DNAH14Q0VDD8 3507 aa10.97□□□□□ -0.65
HPS3-201ENST00000296051 E7EQL1 145 aa10.97□□□□□ -0.65
HPS3-201ENST00000296051 Q6ZS49 121 aa10.97□□□□□ -0.65
HPS3-201ENST00000296051 SRRM5B3KS81 715 aa10.96□□□□□ -0.65
HPS3-201ENST00000296051 TMEM178BH3BS89 294 aa10.96□□□□□ -0.65
HPS3-201ENST00000296051 TPTE2P1Q5T6R2 138 aa10.96□□□□□ -0.65
HPS3-201ENST00000296051 CIARTQ8N365 385 aaPredicted RBP10.96□□□□□ -0.65
HPS3-201ENST00000296051 PROK2Q9HC23 129 aa10.96□□□□□ -0.65
HPS3-201ENST00000296051 AREGP15514 252 aa10.96□□□□□ -0.66
HPS3-201ENST00000296051 C3orf36Q3SXR2 165 aa10.96□□□□□ -0.66
HPS3-201ENST00000296051 ZNF329Q86UD4 541 aa10.96□□□□□ -0.66
HPS3-201ENST00000296051 RCHY1Q96PM5 261 aa10.96□□□□□ -0.66
HPS3-201ENST00000296051 MAP1LC3AQ9H492 121 aa10.96□□□□□ -0.66
HPS3-201ENST00000296051 K7EM74 188 aa10.96□□□□□ -0.66
HPS3-201ENST00000296051 MLNRO43193 412 aa10.96□□□□□ -0.66
HPS3-201ENST00000296051 IGFL3Q6UXB1 125 aa10.96□□□□□ -0.66
HPS3-201ENST00000296051 EXOC3-AS1Q8N2X6 119 aa10.96□□□□□ -0.66
HPS3-201ENST00000296051 IGLC2P0DOY2 106 aa10.95□□□□□ -0.66
HPS3-201ENST00000296051 IGLC3P0DOY3 106 aa10.95□□□□□ -0.66
HPS3-201ENST00000296051 SLC25A16P16260 332 aa10.95□□□□□ -0.66
HPS3-201ENST00000296051 C2CD3Q4AC94 2353 aa10.95□□□□□ -0.66
HPS3-201ENST00000296051 IGKV1-16P04430 117 aa10.95□□□□□ -0.66
HPS3-201ENST00000296051 RAB9AP51151 201 aa10.95□□□□□ -0.66
HPS3-201ENST00000296051 SMIM12Q96EX1 92 aa10.95□□□□□ -0.66
HPS3-201ENST00000296051 M0R3E3 92 aa10.95□□□□□ -0.66
HPS3-201ENST00000296051 RHOGP84095 191 aa10.95□□□□□ -0.66
HPS3-201ENST00000296051 NHP2Q9NX24 153 aaKnown RBP10.95□□□□□ -0.66
HPS3-201ENST00000296051 TRBV20OR9-2A0A075B6H5 130 aa10.94□□□□□ -0.66
HPS3-201ENST00000296051 IGLV3-1P01715 115 aa10.94□□□□□ -0.66
HPS3-201ENST00000296051 SMIM13P0DJ93 91 aa10.94□□□□□ -0.66
HPS3-201ENST00000296051 PRCDQ00LT1 54 aa10.94□□□□□ -0.66
HPS3-201ENST00000296051 PET117Q6UWS5 81 aa10.94□□□□□ -0.66
HPS3-201ENST00000296051 VMO1Q7Z5L0 202 aa10.94□□□□□ -0.66
HPS3-201ENST00000296051 FAM159AQ6UWV7 190 aa10.94□□□□□ -0.66
HPS3-201ENST00000296051 PRUNE2Q8WUY3 3088 aa10.94□□□□□ -0.66
HPS3-201ENST00000296051 CACNG8Q8WXS5 425 aa10.94□□□□□ -0.66
HPS3-201ENST00000296051 PEMTQ9UBM1 199 aa10.94□□□□□ -0.66
HPS3-201ENST00000296051 RPUSD1Q9UJJ7 312 aaKnown RBP10.94□□□□□ -0.66
HPS3-201ENST00000296051 ETV2O00321 342 aaPredicted RBP10.94□□□□□ -0.66
HPS3-201ENST00000296051 SCRT1Q9BWW7 348 aa10.94□□□□□ -0.66
HPS3-201ENST00000296051 ANKRD11Q6UB99 2663 aaPredicted RBP10.94□□□□□ -0.66
HPS3-201ENST00000296051 BPTFQ12830 3046 aa10.94□□□□□ -0.66
HPS3-201ENST00000296051 TRBV6-6A0A0A6YYG2 114 aa10.94□□□□□ -0.66
HPS3-201ENST00000296051 SLAQ13239 276 aa10.94□□□□□ -0.66
HPS3-201ENST00000296051 SPEGQ15772 3267 aa10.93□□□□□ -0.66
HPS3-201ENST00000296051 OR2K2Q8NGT1 345 aa10.93□□□□□ -0.66
HPS3-201ENST00000296051 C18orf32Q8TCD1 76 aa10.93□□□□□ -0.66
HPS3-201ENST00000296051 FOXC2Q99958 501 aa10.93□□□□□ -0.66
HPS3-201ENST00000296051 FRMD6-AS1P0C7T7 363 aa10.93□□□□□ -0.66
HPS3-201ENST00000296051 WDR86Q86TI4 376 aa10.93□□□□□ -0.66
HPS3-201ENST00000296051 SYT8Q8NBV8 401 aa10.93□□□□□ -0.66
HPS3-201ENST00000296051 OR1N2Q8NGR9 330 aa10.93□□□□□ -0.66
HPS3-201ENST00000296051 HERVK_113P61574 105 aa10.93□□□□□ -0.66
HPS3-201ENST00000296051 TEX45Q8NA69 505 aa10.93□□□□□ -0.66
HPS3-201ENST00000296051 COX11Q9Y6N1 276 aa10.93□□□□□ -0.66
HPS3-201ENST00000296051 MED12LQ86YW9 2145 aa10.93□□□□□ -0.66
HPS3-201ENST00000296051 SMAGPQ0VAQ4 97 aa10.93□□□□□ -0.66
HPS3-201ENST00000296051 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.93□□□□□ -0.66
HPS3-201ENST00000296051 MBNL3Q9NUK0 354 aaKnown RBP10.93□□□□□ -0.66
HPS3-201ENST00000296051 FRMPD3Q5JV73 1810 aa10.93□□□□□ -0.66
HPS3-201ENST00000296051 SAP30O75446 220 aa10.92□□□□□ -0.66
HPS3-201ENST00000296051 NCR2O95944 276 aa10.92□□□□□ -0.66
HPS3-201ENST00000296051 LINC01356Q8N9X3 169 aa10.92□□□□□ -0.66
HPS3-201ENST00000296051 FGF23Q9GZV9 251 aaPredicted RBP10.92□□□□□ -0.66
HPS3-201ENST00000296051 PSMB11A5LHX3 300 aa10.92□□□□□ -0.66
HPS3-201ENST00000296051 TMEM262E9PQX1 116 aa10.92□□□□□ -0.66
HPS3-201ENST00000296051 IGLL1P15814 213 aa10.92□□□□□ -0.66
HPS3-201ENST00000296051 UBE2L6O14933 153 aa10.92□□□□□ -0.66
HPS3-201ENST00000296051 DEFB104AQ8WTQ1 72 aa10.92□□□□□ -0.66
HPS3-201ENST00000296051 TMEM200BQ69YZ2 307 aa10.91□□□□□ -0.66
HPS3-201ENST00000296051 BEX4Q9NWD9 120 aaPredicted RBP10.91□□□□□ -0.66
HPS3-201ENST00000296051 IGHV2-26A0A0B4J1V2 119 aa10.91□□□□□ -0.66
HPS3-201ENST00000296051 A0A1B0GWB2 263 aa10.91□□□□□ -0.66
HPS3-201ENST00000296051 GAGE12BA1L429 117 aa10.91□□□□□ -0.66
HPS3-201ENST00000296051 NPIPB6E9PJ23 425 aa10.91□□□□□ -0.66
HPS3-201ENST00000296051 SYS1-DBNDD2H3BUS1 97 aa10.91□□□□□ -0.66
HPS3-201ENST00000296051 CEACAM4O75871 244 aa10.91□□□□□ -0.66
HPS3-201ENST00000296051 EVI2AP22794 236 aa10.91□□□□□ -0.66
HPS3-201ENST00000296051 YPEL3P61236 119 aaPredicted RBP10.91□□□□□ -0.66
HPS3-201ENST00000296051 Q0VG73 95 aa10.91□□□□□ -0.66
HPS3-201ENST00000296051 GUSBP1Q15486 140 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 654.8 ms