RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 DUSP15Q9H1R2 295 aaPredicted RBP9.76□□□□□ -0.85
SHROOM3-201ENST00000296043 F2Z2F3 143 aa9.75□□□□□ -0.85
SHROOM3-201ENST00000296043 ACP7Q6ZNF0 438 aa9.75□□□□□ -0.85
SHROOM3-201ENST00000296043 C18orf32Q8TCD1 76 aa9.75□□□□□ -0.85
SHROOM3-201ENST00000296043 Q0VG73 95 aa9.75□□□□□ -0.85
SHROOM3-201ENST00000296043 PCNX3Q9H6A9 2034 aa9.75□□□□□ -0.85
SHROOM3-201ENST00000296043 C4orf51C9J302 202 aa9.75□□□□□ -0.85
SHROOM3-201ENST00000296043 UTF1Q5T230 341 aa9.75□□□□□ -0.85
SHROOM3-201ENST00000296043 VDAC2P45880 294 aaPredicted RBP9.75□□□□□ -0.85
SHROOM3-201ENST00000296043 AHDC1Q5TGY3 1603 aaPredicted RBP9.75□□□□□ -0.85
SHROOM3-201ENST00000296043 IGHV3OR16-10A0A075B7F0 116 aa9.75□□□□□ -0.85
SHROOM3-201ENST00000296043 IGHV2OR16-5A0A0B4J2B6 119 aa9.75□□□□□ -0.85
SHROOM3-201ENST00000296043 TCRBV4S1A1TA0A5B7 111 aa9.75□□□□□ -0.85
SHROOM3-201ENST00000296043 DNAJC30Q96LL9 226 aa9.75□□□□□ -0.85
SHROOM3-201ENST00000296043 FGF6P10767 208 aa9.75□□□□□ -0.85
SHROOM3-201ENST00000296043 RHOGP84095 191 aa9.75□□□□□ -0.85
SHROOM3-201ENST00000296043 ITLN2Q8WWU7 325 aaPredicted RBP9.75□□□□□ -0.85
SHROOM3-201ENST00000296043 SAA2-SAA4A0A096LPE2 208 aa9.75□□□□□ -0.85
SHROOM3-201ENST00000296043 SAA2P0DJI9 122 aaPredicted RBP9.75□□□□□ -0.85
SHROOM3-201ENST00000296043 SHISA5Q8N114 240 aa9.74□□□□□ -0.85
SHROOM3-201ENST00000296043 HTN3P15516 51 aa9.74□□□□□ -0.85
SHROOM3-201ENST00000296043 SUPT4H1P63272 117 aaKnown RBP9.74□□□□□ -0.85
SHROOM3-201ENST00000296043 FDCSPQ8NFU4 85 aa9.74□□□□□ -0.85
SHROOM3-201ENST00000296043 MYMXA0A1B0GTQ4 84 aa9.74□□□□□ -0.85
SHROOM3-201ENST00000296043 CFHR2P36980 270 aa9.74□□□□□ -0.85
SHROOM3-201ENST00000296043 LTBP3Q9NS15 1303 aa9.74□□□□□ -0.85
SHROOM3-201ENST00000296043 TINCRA0A1B0GVN0 87 aa9.74□□□□□ -0.85
SHROOM3-201ENST00000296043 Q8TAT8 98 aa9.74□□□□□ -0.85
SHROOM3-201ENST00000296043 IMMP1LQ96LU5 166 aa9.74□□□□□ -0.85
SHROOM3-201ENST00000296043 REPIN1Q9BWE0 567 aaKnown RBP9.74□□□□□ -0.85
SHROOM3-201ENST00000296043 LDLRAD1Q5T700 205 aa9.74□□□□□ -0.85
SHROOM3-201ENST00000296043 Q6ZS52 159 aa9.74□□□□□ -0.85
SHROOM3-201ENST00000296043 RPP25LQ8N5L8 163 aaKnown RBP9.74□□□□□ -0.85
SHROOM3-201ENST00000296043 KLF14Q8TD94 323 aaPredicted RBP9.74□□□□□ -0.85
SHROOM3-201ENST00000296043 SH2D1AO60880 128 aa9.74□□□□□ -0.85
SHROOM3-201ENST00000296043 SLC25A16P16260 332 aa9.74□□□□□ -0.85
SHROOM3-201ENST00000296043 HAMPP81172 84 aa9.74□□□□□ -0.85
SHROOM3-201ENST00000296043 TMEM171Q8WVE6 324 aa9.73□□□□□ -0.85
SHROOM3-201ENST00000296043 SLC25A39Q9BZJ4 359 aaPredicted RBP9.73□□□□□ -0.85
SHROOM3-201ENST00000296043 IQCF6A8MYZ5 107 aa9.73□□□□□ -0.85
SHROOM3-201ENST00000296043 RNF125Q96EQ8 232 aa9.73□□□□□ -0.85
SHROOM3-201ENST00000296043 C15orf61A6NNL5 157 aa9.73□□□□□ -0.85
SHROOM3-201ENST00000296043 ZC2HC1AQ96GY0 325 aa9.73□□□□□ -0.85
SHROOM3-201ENST00000296043 CXorf51AA0A1B0GTR3 108 aa9.73□□□□□ -0.85
SHROOM3-201ENST00000296043 CLEC19AQ6UXS0 136 aa9.73□□□□□ -0.85
SHROOM3-201ENST00000296043 OR11H6Q8NGC7 330 aa9.73□□□□□ -0.85
SHROOM3-201ENST00000296043 FAM236AA0A1B0GUQ0 79 aa9.72□□□□□ -0.85
SHROOM3-201ENST00000296043 FAM236BA0A1B0GV22 79 aa9.72□□□□□ -0.85
SHROOM3-201ENST00000296043 IFNL4K9M1U5 179 aa9.72□□□□□ -0.85
SHROOM3-201ENST00000296043 SPXQ9BT56 116 aa9.72□□□□□ -0.85
SHROOM3-201ENST00000296043 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.72□□□□□ -0.85
SHROOM3-201ENST00000296043 TRBV6-7A0A0A0MS04 114 aa9.72□□□□□ -0.85
SHROOM3-201ENST00000296043 CT83Q5H943 113 aa9.72□□□□□ -0.85
SHROOM3-201ENST00000296043 U3KQE9 123 aa9.72□□□□□ -0.85
SHROOM3-201ENST00000296043 SRD5A1P18405 259 aa9.72□□□□□ -0.85
SHROOM3-201ENST00000296043 SPANXDQ9BXN6 97 aa9.72□□□□□ -0.85
SHROOM3-201ENST00000296043 WIPF3A6NGB9 483 aa9.72□□□□□ -0.85
SHROOM3-201ENST00000296043 ADARB2-AS1A8MUL3 147 aa9.72□□□□□ -0.85
SHROOM3-201ENST00000296043 SHISA9B4DS77 424 aa9.72□□□□□ -0.85
SHROOM3-201ENST00000296043 CISD3P0C7P0 127 aa9.72□□□□□ -0.85
SHROOM3-201ENST00000296043 RPL15P61313 204 aaKnown RBP9.72□□□□□ -0.85
SHROOM3-201ENST00000296043 KLK10O43240 276 aa9.72□□□□□ -0.85
SHROOM3-201ENST00000296043 ZNF71Q9NQZ8 489 aaPredicted RBP9.72□□□□□ -0.85
SHROOM3-201ENST00000296043 hADV29S1A0JD25 119 aa9.72□□□□□ -0.85
SHROOM3-201ENST00000296043 TRGV2A0A075B6R0 118 aa9.71□□□□□ -0.85
SHROOM3-201ENST00000296043 F8WEM9 126 aa9.71□□□□□ -0.85
SHROOM3-201ENST00000296043 FOXS1O43638 330 aa9.71□□□□□ -0.85
SHROOM3-201ENST00000296043 PNRC2Q9NPJ4 139 aaKnown RBP9.71□□□□□ -0.85
SHROOM3-201ENST00000296043 TREML4Q6UXN2 200 aa9.71□□□□□ -0.85
SHROOM3-201ENST00000296043 C14orf178Q8N769 122 aaPredicted RBP9.71□□□□□ -0.85
SHROOM3-201ENST00000296043 TTTY12Q9BZ98 90 aa9.71□□□□□ -0.85
SHROOM3-201ENST00000296043 ANAPC10Q9UM13 185 aa9.71□□□□□ -0.85
SHROOM3-201ENST00000296043 IGHV1-24A0A0C4DH33 117 aa9.71□□□□□ -0.85
SHROOM3-201ENST00000296043 RASL10AQ92737 203 aa9.71□□□□□ -0.85
SHROOM3-201ENST00000296043 FHL5Q5TD97 284 aa9.71□□□□□ -0.85
SHROOM3-201ENST00000296043 A0A0G2JMZ2 1700 aa9.71□□□□□ -0.86
SHROOM3-201ENST00000296043 LRRC37A2A6NM11 1700 aa9.71□□□□□ -0.86
SHROOM3-201ENST00000296043 LRRC37AA6NMS7 1700 aa9.71□□□□□ -0.86
SHROOM3-201ENST00000296043 C16orf97H3BN30 126 aa9.71□□□□□ -0.86
SHROOM3-201ENST00000296043 HOXD3P31249 432 aaPredicted RBP9.71□□□□□ -0.86
SHROOM3-201ENST00000296043 ID3Q02535 119 aa9.71□□□□□ -0.86
SHROOM3-201ENST00000296043 UBL5Q9BZL1 73 aa9.71□□□□□ -0.86
SHROOM3-201ENST00000296043 TTC28Q96AY4 2481 aa9.71□□□□□ -0.86
SHROOM3-201ENST00000296043 GPR179Q6PRD1 2367 aa9.71□□□□□ -0.86
SHROOM3-201ENST00000296043 C10orf91Q5T1B1 145 aa9.71□□□□□ -0.86
SHROOM3-201ENST00000296043 KLF2Q9Y5W3 355 aaPredicted RBP9.71□□□□□ -0.86
SHROOM3-201ENST00000296043 MMP23AO75900 390 aa9.71□□□□□ -0.86
SHROOM3-201ENST00000296043 TFF1P04155 84 aa9.7□□□□□ -0.86
SHROOM3-201ENST00000296043 PLA2G2FQ9BZM2 168 aa9.7□□□□□ -0.86
SHROOM3-201ENST00000296043 ARRDC1-AS1Q9H2J1 176 aa9.7□□□□□ -0.86
SHROOM3-201ENST00000296043 A0A1B0GX51 115 aa9.7□□□□□ -0.86
SHROOM3-201ENST00000296043 KIR2DL5BA0A0G2JN68 375 aa9.7□□□□□ -0.86
SHROOM3-201ENST00000296043 KIR2DL5BA0A0G2JPC4 375 aa9.7□□□□□ -0.86
SHROOM3-201ENST00000296043 KIR2DL5AQ8N109 375 aa9.7□□□□□ -0.86
SHROOM3-201ENST00000296043 OSR1Q8TAX0 266 aaPredicted RBP9.7□□□□□ -0.86
SHROOM3-201ENST00000296043 RNF183Q96D59 192 aa9.7□□□□□ -0.86
SHROOM3-201ENST00000296043 RPL32P62910 135 aaKnown RBP9.7□□□□□ -0.86
SHROOM3-201ENST00000296043 MRPL55Q7Z7F7 128 aaKnown RBP9.7□□□□□ -0.86
SHROOM3-201ENST00000296043 IGKV1D-33P01593 117 aa9.7□□□□□ -0.86
SHROOM3-201ENST00000296043 IGKV1-33P01594 117 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms