RNA–Protein interactions for RNA: ENST00000294728.6

VCAM1-201, Transcript of vascular cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCAM1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-201ENST00000294728 H1FXQ92522 213 aaKnown RBP4.92□□□□□ -1.62
VCAM1-201ENST00000294728 HINT2Q9BX68 163 aa4.92□□□□□ -1.62
VCAM1-201ENST00000294728 SCRT2Q9NQ03 307 aa4.92□□□□□ -1.62
VCAM1-201ENST00000294728 PPIAL4AQ9Y536 164 aa4.92□□□□□ -1.62
VCAM1-201ENST00000294728 USP9XQ93008 2570 aaPredicted RBP4.92□□□□□ -1.62
VCAM1-201ENST00000294728 VSTM5A8MXK1 200 aa4.91□□□□□ -1.62
VCAM1-201ENST00000294728 E7EUB6 86 aa4.91□□□□□ -1.62
VCAM1-201ENST00000294728 SIVA1O15304 175 aa4.91□□□□□ -1.62
VCAM1-201ENST00000294728 NDUFB3O43676 98 aa4.91□□□□□ -1.62
VCAM1-201ENST00000294728 IGLV1-47P01700 117 aa4.91□□□□□ -1.62
VCAM1-201ENST00000294728 SLC25A5P05141 298 aaKnown RBP4.91□□□□□ -1.62
VCAM1-201ENST00000294728 MLANAQ16655 118 aa4.91□□□□□ -1.62
VCAM1-201ENST00000294728 FAM19A2Q8N3H0 131 aa4.91□□□□□ -1.62
VCAM1-201ENST00000294728 Q9H3A6 140 aa4.91□□□□□ -1.62
VCAM1-201ENST00000294728 PGPA6NDG6 321 aa4.91□□□□□ -1.62
VCAM1-201ENST00000294728 OR4C46A6NHA9 309 aa4.91□□□□□ -1.62
VCAM1-201ENST00000294728 SHISA9B4DS77 424 aa4.91□□□□□ -1.62
VCAM1-201ENST00000294728 CCL25O15444 150 aa4.91□□□□□ -1.62
VCAM1-201ENST00000294728 CD5LO43866 347 aa4.91□□□□□ -1.62
VCAM1-201ENST00000294728 FCN3O75636 299 aa4.91□□□□□ -1.62
VCAM1-201ENST00000294728 LEPROTL1O95214 131 aa4.91□□□□□ -1.62
VCAM1-201ENST00000294728 HIST1H1AQ02539 215 aaPredicted RBP4.91□□□□□ -1.62
VCAM1-201ENST00000294728 RIGQ13278 110 aa4.91□□□□□ -1.62
VCAM1-201ENST00000294728 ADIPOQQ15848 244 aa4.91□□□□□ -1.62
VCAM1-201ENST00000294728 DUX4L9Q6RFH8 374 aaPredicted RBP4.91□□□□□ -1.62
VCAM1-201ENST00000294728 PLPPR2Q96GM1 343 aa4.91□□□□□ -1.62
VCAM1-201ENST00000294728 LINC00479Q96M42 142 aa4.91□□□□□ -1.62
VCAM1-201ENST00000294728 MAP1LC3CQ9BXW4 147 aa4.91□□□□□ -1.62
VCAM1-201ENST00000294728 TMEM133Q9H2Q1 129 aa4.91□□□□□ -1.62
VCAM1-201ENST00000294728 HIGD1AQ9Y241 93 aa4.91□□□□□ -1.62
VCAM1-201ENST00000294728 CNTRLQ7Z7A1 2325 aa4.91□□□□□ -1.62
VCAM1-201ENST00000294728 LRRK2Q5S007 2527 aa4.91□□□□□ -1.62
VCAM1-201ENST00000294728 UTP20O75691 2785 aaKnown RBP4.91□□□□□ -1.62
VCAM1-201ENST00000294728 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.91□□□□□ -1.62
VCAM1-201ENST00000294728 TEX22C9J3V5 150 aa4.91□□□□□ -1.62
VCAM1-201ENST00000294728 IGLC1P0CG04 106 aa4.91□□□□□ -1.62
VCAM1-201ENST00000294728 IGHV1-8P0DP01 117 aa4.91□□□□□ -1.62
VCAM1-201ENST00000294728 LOXP28300 417 aaPredicted RBP4.91□□□□□ -1.62
VCAM1-201ENST00000294728 RPL27AP46776 148 aaKnown RBP4.91□□□□□ -1.62
VCAM1-201ENST00000294728 RBX1P62877 108 aa4.91□□□□□ -1.62
VCAM1-201ENST00000294728 SSBP2P81877 361 aaPredicted RBP4.91□□□□□ -1.62
VCAM1-201ENST00000294728 SLC25A34Q6PIV7 304 aa4.91□□□□□ -1.62
VCAM1-201ENST00000294728 SIGLEC9Q9Y336 463 aa4.91□□□□□ -1.62
VCAM1-201ENST00000294728 BOD1L1Q8NFC6 3051 aa4.9□□□□□ -1.62
VCAM1-201ENST00000294728 FBN2P35556 2912 aa4.9□□□□□ -1.62
VCAM1-201ENST00000294728 I3L2K1 104 aa4.9□□□□□ -1.62
VCAM1-201ENST00000294728 CA1P00915 261 aaPredicted RBP4.9□□□□□ -1.62
VCAM1-201ENST00000294728 NTF3P20783 257 aa4.9□□□□□ -1.62
VCAM1-201ENST00000294728 PTTG1IPP53801 180 aa4.9□□□□□ -1.62
VCAM1-201ENST00000294728 SEC11AP67812 179 aa4.9□□□□□ -1.62
VCAM1-201ENST00000294728 RNASEKQ6P5S7 137 aaKnown RBP4.9□□□□□ -1.62
VCAM1-201ENST00000294728 NEU4Q8WWR8 484 aaPredicted RBP4.9□□□□□ -1.62
VCAM1-201ENST00000294728 DAZAP1Q96EP5 407 aaKnown RBP4.9□□□□□ -1.62
VCAM1-201ENST00000294728 SHANK2-AS3Q9BTD1 123 aa4.9□□□□□ -1.62
VCAM1-201ENST00000294728 SSBP3Q9BWW4 388 aaPredicted RBP4.9□□□□□ -1.62
VCAM1-201ENST00000294728 WNT10AQ9GZT5 417 aa4.9□□□□□ -1.62
VCAM1-201ENST00000294728 A0A1B0GUT8 65 aa4.9□□□□□ -1.63
VCAM1-201ENST00000294728 HSBP1L1C9JCN9 74 aa4.9□□□□□ -1.63
VCAM1-201ENST00000294728 LY6LH3BQJ8 138 aa4.9□□□□□ -1.63
VCAM1-201ENST00000294728 H3BRN7 92 aa4.9□□□□□ -1.63
VCAM1-201ENST00000294728 K7EQM0 130 aa4.9□□□□□ -1.63
VCAM1-201ENST00000294728 MRPS12O15235 138 aaKnown RBP4.9□□□□□ -1.63
VCAM1-201ENST00000294728 CT45A10P0DMU9 189 aa4.9□□□□□ -1.63
VCAM1-201ENST00000294728 COX8AP10176 69 aa4.9□□□□□ -1.63
VCAM1-201ENST00000294728 SLC35B1P78383 322 aa4.9□□□□□ -1.63
VCAM1-201ENST00000294728 FBLN7Q53RD9 439 aa4.9□□□□□ -1.63
VCAM1-201ENST00000294728 PRR30Q53SZ7 412 aaPredicted RBP4.9□□□□□ -1.63
VCAM1-201ENST00000294728 BVES-AS1Q5T3Y7 98 aa4.9□□□□□ -1.63
VCAM1-201ENST00000294728 RAB1BQ9H0U4 201 aa4.9□□□□□ -1.63
VCAM1-201ENST00000294728 MRPL36Q9P0J6 103 aaKnown RBP4.9□□□□□ -1.63
VCAM1-201ENST00000294728 ICE1Q9Y2F5 2266 aa4.9□□□□□ -1.63
VCAM1-201ENST00000294728 TRBV19A0A075B6N1 114 aa4.89□□□□□ -1.63
VCAM1-201ENST00000294728 WI2-2373I1.2A0A1W2PRP0 233 aa4.89□□□□□ -1.63
VCAM1-201ENST00000294728 SPINK4O60575 86 aa4.89□□□□□ -1.63
VCAM1-201ENST00000294728 IGHV3-7P01780 117 aa4.89□□□□□ -1.63
VCAM1-201ENST00000294728 FCGR2BP31994 310 aaPredicted RBP4.89□□□□□ -1.63
VCAM1-201ENST00000294728 LGALS9BQ3B8N2 356 aa4.89□□□□□ -1.63
VCAM1-201ENST00000294728 FAM201AQ5SY85 155 aa4.89□□□□□ -1.63
VCAM1-201ENST00000294728 LGALS9CQ6DKI2 356 aa4.89□□□□□ -1.63
VCAM1-201ENST00000294728 LINC00322Q6ZN03 302 aaPredicted RBP4.89□□□□□ -1.63
VCAM1-201ENST00000294728 CIARTQ8N365 385 aaPredicted RBP4.89□□□□□ -1.63
VCAM1-201ENST00000294728 RPRMLQ8N4K4 120 aa4.89□□□□□ -1.63
VCAM1-201ENST00000294728 SLC25A39Q9BZJ4 359 aaPredicted RBP4.89□□□□□ -1.63
VCAM1-201ENST00000294728 LOC105371242A0A075B767 164 aa4.89□□□□□ -1.63
VCAM1-201ENST00000294728 SH2D7A6NKC9 451 aaPredicted RBP4.89□□□□□ -1.63
VCAM1-201ENST00000294728 C16orf97H3BN30 126 aa4.89□□□□□ -1.63
VCAM1-201ENST00000294728 TAX1BP3O14907 124 aa4.89□□□□□ -1.63
VCAM1-201ENST00000294728 HLA-DRB4P13762 266 aa4.89□□□□□ -1.63
VCAM1-201ENST00000294728 S100A7P31151 101 aa4.89□□□□□ -1.63
VCAM1-201ENST00000294728 CSN1S1P47710 185 aa4.89□□□□□ -1.63
VCAM1-201ENST00000294728 TFPI2P48307 235 aa4.89□□□□□ -1.63
VCAM1-201ENST00000294728 Q56UQ5 140 aa4.89□□□□□ -1.63
VCAM1-201ENST00000294728 NPBQ8NG41 125 aa4.89□□□□□ -1.63
VCAM1-201ENST00000294728 OR10AG1Q8NH19 301 aa4.89□□□□□ -1.63
VCAM1-201ENST00000294728 CNFNQ9BYD5 112 aa4.89□□□□□ -1.63
VCAM1-201ENST00000294728 HLA-DRB4X5D2U9 266 aa4.89□□□□□ -1.63
VCAM1-201ENST00000294728 TRAV34A0A0B4J273 112 aa4.88□□□□□ -1.63
VCAM1-201ENST00000294728 ZNF785A8K8V0 405 aa4.88□□□□□ -1.63
VCAM1-201ENST00000294728 CHEK1O14757 476 aa4.88□□□□□ -1.63
VCAM1-201ENST00000294728 TCF21O43680 179 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms