RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 LCNL1Q6ZST4 164 aa10.29□□□□□ -0.76
SLC6A1-201ENST00000287766 OR9G4Q8NGQ1 327 aa10.29□□□□□ -0.76
SLC6A1-201ENST00000287766 FBXL15Q9H469 300 aa10.29□□□□□ -0.76
SLC6A1-201ENST00000287766 MBNL3Q9NUK0 354 aaKnown RBP10.29□□□□□ -0.76
SLC6A1-201ENST00000287766 IGHV3-66A0A0C4DH42 116 aa10.29□□□□□ -0.76
SLC6A1-201ENST00000287766 CRIP3Q6Q6R5 217 aa10.29□□□□□ -0.76
SLC6A1-201ENST00000287766 Q6ZWC4 215 aa10.29□□□□□ -0.76
SLC6A1-201ENST00000287766 TEX45Q8NA69 505 aa10.29□□□□□ -0.76
SLC6A1-201ENST00000287766 IGKV3-20P01619 116 aa10.28□□□□□ -0.76
SLC6A1-201ENST00000287766 IGHV1-46P01743 117 aa10.28□□□□□ -0.76
SLC6A1-201ENST00000287766 ZNF56Q15929 161 aa10.28□□□□□ -0.76
SLC6A1-201ENST00000287766 CHCHD1Q96BP2 118 aaKnown RBP10.28□□□□□ -0.76
SLC6A1-201ENST00000287766 A0A1W2PS18 150 aa10.28□□□□□ -0.76
SLC6A1-201ENST00000287766 PPP1R17O96001 155 aa10.28□□□□□ -0.76
SLC6A1-201ENST00000287766 TDGF1P13385 188 aa10.28□□□□□ -0.76
SLC6A1-201ENST00000287766 PSMG4Q5JS54 123 aa10.28□□□□□ -0.76
SLC6A1-201ENST00000287766 WISP2O76076 250 aa10.28□□□□□ -0.76
SLC6A1-201ENST00000287766 SUMO2P61956 95 aaKnown RBP10.28□□□□□ -0.76
SLC6A1-201ENST00000287766 MRPL52Q86TS9 123 aaKnown RBP10.28□□□□□ -0.76
SLC6A1-201ENST00000287766 CIARTQ8N365 385 aaPredicted RBP10.28□□□□□ -0.76
SLC6A1-201ENST00000287766 ZNF815PA8K554 130 aa10.28□□□□□ -0.76
SLC6A1-201ENST00000287766 NCR2O95944 276 aa10.28□□□□□ -0.76
SLC6A1-201ENST00000287766 ERVK11-1P61568 191 aa10.28□□□□□ -0.76
SLC6A1-201ENST00000287766 Q6ZPA2 131 aa10.28□□□□□ -0.76
SLC6A1-201ENST00000287766 OTOGLQ3ZCN5 2332 aa10.28□□□□□ -0.76
SLC6A1-201ENST00000287766 IGKV1-16P04430 117 aa10.27□□□□□ -0.76
SLC6A1-201ENST00000287766 SCRT1Q9BWW7 348 aa10.27□□□□□ -0.76
SLC6A1-201ENST00000287766 TSSC4Q9Y5U2 329 aaPredicted RBP10.27□□□□□ -0.76
SLC6A1-201ENST00000287766 UPK2O00526 184 aa10.27□□□□□ -0.77
SLC6A1-201ENST00000287766 IGHV3-23P01764 117 aa10.27□□□□□ -0.77
SLC6A1-201ENST00000287766 CD300EQ496F6 205 aaPredicted RBP10.27□□□□□ -0.77
SLC6A1-201ENST00000287766 FMC1Q96HJ9 113 aa10.27□□□□□ -0.77
SLC6A1-201ENST00000287766 METTL26Q96S19 204 aa10.27□□□□□ -0.77
SLC6A1-201ENST00000287766 RAB1BQ9H0U4 201 aa10.27□□□□□ -0.77
SLC6A1-201ENST00000287766 XIRP2A4UGR9 3374 aa10.27□□□□□ -0.77
SLC6A1-201ENST00000287766 DYSFO75923 2080 aa10.27□□□□□ -0.77
SLC6A1-201ENST00000287766 GFRA3O60609 400 aa10.27□□□□□ -0.77
SLC6A1-201ENST00000287766 ATP5IP56385 69 aaPredicted RBP10.27□□□□□ -0.77
SLC6A1-201ENST00000287766 WFDC12Q8WWY7 111 aa10.27□□□□□ -0.77
SLC6A1-201ENST00000287766 FOXA2Q9Y261 457 aaPredicted RBP10.27□□□□□ -0.77
SLC6A1-201ENST00000287766 ASPHD1Q5U4P2 390 aa10.26□□□□□ -0.77
SLC6A1-201ENST00000287766 PRR7Q8TB68 274 aa10.26□□□□□ -0.77
SLC6A1-201ENST00000287766 PLSCR4Q9NRQ2 329 aa10.26□□□□□ -0.77
SLC6A1-201ENST00000287766 C17orf100A8MU93 164 aa10.26□□□□□ -0.77
SLC6A1-201ENST00000287766 IGKCP01834 107 aa10.26□□□□□ -0.77
SLC6A1-201ENST00000287766 GAGE1Q13065 139 aa10.26□□□□□ -0.77
SLC6A1-201ENST00000287766 ASCL5Q7RTU5 278 aa10.26□□□□□ -0.77
SLC6A1-201ENST00000287766 CACNG8Q8WXS5 425 aa10.26□□□□□ -0.77
SLC6A1-201ENST00000287766 SLC25A15Q9Y619 301 aa10.26□□□□□ -0.77
SLC6A1-201ENST00000287766 ANKHD1Q8IWZ3 2542 aaKnown RBP10.26□□□□□ -0.77
SLC6A1-201ENST00000287766 TRAV2A0A0B4J234 112 aa10.26□□□□□ -0.77
SLC6A1-201ENST00000287766 K7EP13 123 aa10.26□□□□□ -0.77
SLC6A1-201ENST00000287766 Q6AWC8 147 aa10.26□□□□□ -0.77
SLC6A1-201ENST00000287766 LINC00479Q96M42 142 aa10.26□□□□□ -0.77
SLC6A1-201ENST00000287766 A0A0U1RRA0 63 aa10.26□□□□□ -0.77
SLC6A1-201ENST00000287766 ZNF474Q6S9Z5 364 aaPredicted RBP10.26□□□□□ -0.77
SLC6A1-201ENST00000287766 NUP35Q8NFH5 326 aa10.26□□□□□ -0.77
SLC6A1-201ENST00000287766 DEFB104AQ8WTQ1 72 aa10.26□□□□□ -0.77
SLC6A1-201ENST00000287766 TMEM155Q4W5P6 130 aa10.25□□□□□ -0.77
SLC6A1-201ENST00000287766 OSR1Q8TAX0 266 aaPredicted RBP10.25□□□□□ -0.77
SLC6A1-201ENST00000287766 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.25□□□□□ -0.77
SLC6A1-201ENST00000287766 IGLL1P15814 213 aa10.25□□□□□ -0.77
SLC6A1-201ENST00000287766 ZC2HC1BQ5TFG8 222 aa10.25□□□□□ -0.77
SLC6A1-201ENST00000287766 LYPD6BQ8NI32 183 aa10.25□□□□□ -0.77
SLC6A1-201ENST00000287766 NPIPB5A8MRT5 1133 aa10.25□□□□□ -0.77
SLC6A1-201ENST00000287766 NPIPB11E5RHQ5 1161 aa10.25□□□□□ -0.77
SLC6A1-201ENST00000287766 RNASE8Q8TDE3 154 aaKnown RBP10.25□□□□□ -0.77
SLC6A1-201ENST00000287766 FAM208BQ5VWN6 2430 aa10.24□□□□□ -0.77
SLC6A1-201ENST00000287766 A0A1B0GW15 77 aa10.24□□□□□ -0.77
SLC6A1-201ENST00000287766 CLEC2AQ6UVW9 174 aa10.24□□□□□ -0.77
SLC6A1-201ENST00000287766 TLN1Q9Y490 2541 aaKnown RBP10.24□□□□□ -0.77
SLC6A1-201ENST00000287766 PLXNB1O43157 2135 aa10.24□□□□□ -0.77
SLC6A1-201ENST00000287766 IGHV3OR16-12A0A075B7B8 117 aa10.24□□□□□ -0.77
SLC6A1-201ENST00000287766 TRAV8-4A0A0B4J246 113 aa10.24□□□□□ -0.77
SLC6A1-201ENST00000287766 D6R8Y8 96 aa10.24□□□□□ -0.77
SLC6A1-201ENST00000287766 PF4V1P10720 104 aa10.24□□□□□ -0.77
SLC6A1-201ENST00000287766 TMEM249Q2WGJ8 235 aa10.24□□□□□ -0.77
SLC6A1-201ENST00000287766 FAM71F2Q6NXP2 309 aa10.24□□□□□ -0.77
SLC6A1-201ENST00000287766 ZNF114Q8NC26 417 aa10.24□□□□□ -0.77
SLC6A1-201ENST00000287766 CACNA1AO00555 2505 aa10.24□□□□□ -0.77
SLC6A1-201ENST00000287766 LINC00312Q9Y6C7 94 aa10.24□□□□□ -0.77
SLC6A1-201ENST00000287766 ZNF134P52741 427 aa10.23□□□□□ -0.77
SLC6A1-201ENST00000287766 PAPPA-AS1Q5QFB9 102 aa10.23□□□□□ -0.77
SLC6A1-201ENST00000287766 CCDC144NLQ6NUI1 221 aa10.23□□□□□ -0.77
SLC6A1-201ENST00000287766 SRSF8Q9BRL6 282 aaKnown RBP10.23□□□□□ -0.77
SLC6A1-201ENST00000287766 RPUSD1Q9UJJ7 312 aaKnown RBP10.23□□□□□ -0.77
SLC6A1-201ENST00000287766 PSG8Q9UQ74 426 aa10.23□□□□□ -0.77
SLC6A1-201ENST00000287766 CEP295Q9C0D2 2601 aa10.23□□□□□ -0.77
SLC6A1-201ENST00000287766 IGKV3D-20A0A0C4DH25 116 aa10.23□□□□□ -0.77
SLC6A1-201ENST00000287766 A0A1W2PNU3 283 aaPredicted RBP10.23□□□□□ -0.77
SLC6A1-201ENST00000287766 FAM159AQ6UWV7 190 aa10.23□□□□□ -0.77
SLC6A1-201ENST00000287766 IGHV3-64A0A075B6Q5 118 aa10.23□□□□□ -0.77
SLC6A1-201ENST00000287766 PRCDQ00LT1 54 aa10.23□□□□□ -0.77
SLC6A1-201ENST00000287766 CD69Q07108 199 aa10.23□□□□□ -0.77
SLC6A1-201ENST00000287766 SYT8Q8NBV8 401 aa10.23□□□□□ -0.77
SLC6A1-201ENST00000287766 FAM57AQ8TBR7 257 aa10.23□□□□□ -0.77
SLC6A1-201ENST00000287766 NCOR1P1Q9H4R4 102 aa10.23□□□□□ -0.77
SLC6A1-201ENST00000287766 MRPL27Q9P0M9 148 aaKnown RBP10.23□□□□□ -0.77
SLC6A1-201ENST00000287766 NPPCP23582 126 aa10.22□□□□□ -0.77
SLC6A1-201ENST00000287766 ID1P41134 155 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms