RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 SIGLEC8Q9NYZ4 499 aa16.48■□□□□ 0.23
PDLIM3-203ENST00000284771 TECRQ9NZ01 308 aaKnown RBP16.48■□□□□ 0.23
PDLIM3-203ENST00000284771 MRPS12O15235 138 aaKnown RBP16.47■□□□□ 0.23
PDLIM3-203ENST00000284771 ACTR3CQ9C0K3 210 aaPredicted RBP16.47■□□□□ 0.23
PDLIM3-203ENST00000284771 SMAD5-AS1Q9Y6J3 95 aa16.47■□□□□ 0.23
PDLIM3-203ENST00000284771 DNHD1Q96M86 4753 aa16.47■□□□□ 0.23
PDLIM3-203ENST00000284771 A0A1W2PS18 150 aa16.46■□□□□ 0.23
PDLIM3-203ENST00000284771 RAB5CP51148 216 aa16.46■□□□□ 0.23
PDLIM3-203ENST00000284771 OR8I2Q8N0Y5 310 aa16.46■□□□□ 0.23
PDLIM3-203ENST00000284771 SAP30O75446 220 aa16.46■□□□□ 0.23
PDLIM3-203ENST00000284771 SNRPCP09234 159 aaKnown RBP16.46■□□□□ 0.23
PDLIM3-203ENST00000284771 STAG3L2P0CL84 134 aa16.46■□□□□ 0.23
PDLIM3-203ENST00000284771 STAG3L3P0CL85 134 aa16.46■□□□□ 0.23
PDLIM3-203ENST00000284771 C1orf194Q5T5A4 169 aa16.46■□□□□ 0.23
PDLIM3-203ENST00000284771 FAM90A2PQ658T7 463 aa16.46■□□□□ 0.23
PDLIM3-203ENST00000284771 RNF141Q8WVD5 230 aa16.46■□□□□ 0.23
PDLIM3-203ENST00000284771 CMYA5Q8N3K9 4069 aa16.45■□□□□ 0.22
PDLIM3-203ENST00000284771 CTXND1A0A1B0GTU2 59 aa16.45■□□□□ 0.22
PDLIM3-203ENST00000284771 PYYP10082 97 aa16.45■□□□□ 0.22
PDLIM3-203ENST00000284771 CD33P20138 364 aa16.45■□□□□ 0.22
PDLIM3-203ENST00000284771 DEFB114Q30KQ6 69 aa16.45■□□□□ 0.22
PDLIM3-203ENST00000284771 DPPA3Q6W0C5 159 aa16.45■□□□□ 0.22
PDLIM3-203ENST00000284771 NARS2Q96I59 477 aaKnown RBP16.45■□□□□ 0.22
PDLIM3-203ENST00000284771 PFDN2Q9UHV9 154 aa16.45■□□□□ 0.22
PDLIM3-203ENST00000284771 IFNA7P01567 189 aa16.44■□□□□ 0.22
PDLIM3-203ENST00000284771 GP9P14770 177 aa16.44■□□□□ 0.22
PDLIM3-203ENST00000284771 LCN15Q6UWW0 184 aa16.44■□□□□ 0.22
PDLIM3-203ENST00000284771 S100A7AQ86SG5 101 aa16.44■□□□□ 0.22
PDLIM3-203ENST00000284771 PCNPQ8WW12 178 aaKnown RBP16.44■□□□□ 0.22
PDLIM3-203ENST00000284771 ZNF705EA8MWA4 302 aaPredicted RBP16.43■□□□□ 0.22
PDLIM3-203ENST00000284771 FGF8P55075 233 aaPredicted RBP16.43■□□□□ 0.22
PDLIM3-203ENST00000284771 MBD3L1Q8WWY6 194 aa16.43■□□□□ 0.22
PDLIM3-203ENST00000284771 OR10J4P0C629 311 aa16.43■□□□□ 0.22
PDLIM3-203ENST00000284771 S100A7P31151 101 aa16.43■□□□□ 0.22
PDLIM3-203ENST00000284771 CD300EQ496F6 205 aaPredicted RBP16.43■□□□□ 0.22
PDLIM3-203ENST00000284771 SIGLEC15Q6ZMC9 328 aa16.43■□□□□ 0.22
PDLIM3-203ENST00000284771 TCF24Q7RTU0 167 aa16.43■□□□□ 0.22
PDLIM3-203ENST00000284771 BPIFA4PQ86YQ2 179 aa16.43■□□□□ 0.22
PDLIM3-203ENST00000284771 GRAMD2BQ96HH9 432 aa16.43■□□□□ 0.22
PDLIM3-203ENST00000284771 SORL1Q92673 2214 aa16.42■□□□□ 0.22
PDLIM3-203ENST00000284771 IZUMO1RA6ND01 250 aa16.42■□□□□ 0.22
PDLIM3-203ENST00000284771 H3BQ15 152 aa16.42■□□□□ 0.22
PDLIM3-203ENST00000284771 IGLV1-51P01701 117 aa16.42■□□□□ 0.22
PDLIM3-203ENST00000284771 H2AFB1P0C5Y9 115 aa16.42■□□□□ 0.22
PDLIM3-203ENST00000284771 ARL14EPLP0DKL9 152 aa16.42■□□□□ 0.22
PDLIM3-203ENST00000284771 IGLL1P15814 213 aa16.42■□□□□ 0.22
PDLIM3-203ENST00000284771 RPL7P18124 248 aaKnown RBP16.42■□□□□ 0.22
PDLIM3-203ENST00000284771 SFT2D1Q8WV19 159 aa16.42■□□□□ 0.22
PDLIM3-203ENST00000284771 OR51M1Q9H341 326 aa16.42■□□□□ 0.22
PDLIM3-203ENST00000284771 TMPRSS5Q9H3S3 457 aa16.42■□□□□ 0.22
PDLIM3-203ENST00000284771 TMEM231Q9H6L2 316 aa16.42■□□□□ 0.22
PDLIM3-203ENST00000284771 TMEM14CQ9P0S9 112 aa16.42■□□□□ 0.22
PDLIM3-203ENST00000284771 UBQLN2Q9UHD9 624 aa16.42■□□□□ 0.22
PDLIM3-203ENST00000284771 IGKV3-7A0A075B6H7 116 aa16.41■□□□□ 0.22
PDLIM3-203ENST00000284771 MAP1LC3B2A6NCE7 125 aa16.41■□□□□ 0.22
PDLIM3-203ENST00000284771 OR7C2O60412 319 aa16.41■□□□□ 0.22
PDLIM3-203ENST00000284771 IGLC2P0DOY2 106 aa16.41■□□□□ 0.22
PDLIM3-203ENST00000284771 TAS2R45P59539 299 aa16.41■□□□□ 0.22
PDLIM3-203ENST00000284771 KHDC3LQ587J8 217 aa16.41■□□□□ 0.22
PDLIM3-203ENST00000284771 TMEM61Q8N0U2 210 aa16.41■□□□□ 0.22
PDLIM3-203ENST00000284771 FXYD5Q96DB9 178 aa16.41■□□□□ 0.22
PDLIM3-203ENST00000284771 MAP1LC3BQ9GZQ8 125 aa16.41■□□□□ 0.22
PDLIM3-203ENST00000284771 A0A1B0GV50 99 aa16.4■□□□□ 0.22
PDLIM3-203ENST00000284771 H3BTX0 84 aa16.4■□□□□ 0.22
PDLIM3-203ENST00000284771 PQLC2Q6ZP29 291 aa16.4■□□□□ 0.22
PDLIM3-203ENST00000284771 DYNLRB2Q8TF09 96 aa16.4■□□□□ 0.22
PDLIM3-203ENST00000284771 PAXXQ9BUH6 204 aa16.4■□□□□ 0.22
PDLIM3-203ENST00000284771 ZNF586Q9NXT0 402 aa16.4■□□□□ 0.22
PDLIM3-203ENST00000284771 BMI1P35226 326 aa16.4■□□□□ 0.22
PDLIM3-203ENST00000284771 CCL20P78556 96 aa16.4■□□□□ 0.22
PDLIM3-203ENST00000284771 GPR82Q96P67 336 aa16.4■□□□□ 0.22
PDLIM3-203ENST00000284771 HRH4Q9H3N8 390 aa16.4■□□□□ 0.22
PDLIM3-203ENST00000284771 RPL11P62913 178 aaKnown RBP16.39■□□□□ 0.21
PDLIM3-203ENST00000284771 STXBP6Q8NFX7 210 aa16.39■□□□□ 0.21
PDLIM3-203ENST00000284771 RNF24Q9Y225 148 aa16.39■□□□□ 0.21
PDLIM3-203ENST00000284771 HELTA6NFD8 242 aa16.38■□□□□ 0.21
PDLIM3-203ENST00000284771 CXorf1O96002 111 aa16.38■□□□□ 0.21
PDLIM3-203ENST00000284771 NMBP08949 121 aa16.38■□□□□ 0.21
PDLIM3-203ENST00000284771 GCHFRP30047 84 aa16.38■□□□□ 0.21
PDLIM3-203ENST00000284771 GALR1P47211 349 aa16.38■□□□□ 0.21
PDLIM3-203ENST00000284771 C9orf66Q5T8R8 295 aa16.38■□□□□ 0.21
PDLIM3-203ENST00000284771 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.38■□□□□ 0.21
PDLIM3-203ENST00000284771 GBGT1Q8N5D6 347 aa16.38■□□□□ 0.21
PDLIM3-203ENST00000284771 SAT2Q96F10 170 aaPredicted RBP16.38■□□□□ 0.21
PDLIM3-203ENST00000284771 TRAV1-1A0A0B4J248 108 aa16.37■□□□□ 0.21
PDLIM3-203ENST00000284771 HIST1H1EP10412 219 aaKnown RBP16.37■□□□□ 0.21
PDLIM3-203ENST00000284771 PRR31Q5SQ13 230 aa16.37■□□□□ 0.21
PDLIM3-203ENST00000284771 ZNF767PQ75MW2 155 aa16.37■□□□□ 0.21
PDLIM3-203ENST00000284771 LYPD6BQ8NI32 183 aa16.37■□□□□ 0.21
PDLIM3-203ENST00000284771 DCANP1Q8TF63 244 aa16.37■□□□□ 0.21
PDLIM3-203ENST00000284771 MS4A6AQ9H2W1 248 aa16.37■□□□□ 0.21
PDLIM3-203ENST00000284771 ZNF785A8K8V0 405 aa16.37■□□□□ 0.21
PDLIM3-203ENST00000284771 NBEAP1P0C6P0 100 aa16.37■□□□□ 0.21
PDLIM3-203ENST00000284771 INSL3P51460 131 aa16.37■□□□□ 0.21
PDLIM3-203ENST00000284771 OXLD1Q5BKU9 147 aa16.37■□□□□ 0.21
PDLIM3-203ENST00000284771 SUN5Q8TC36 379 aa16.37■□□□□ 0.21
PDLIM3-203ENST00000284771 MCRIP2Q9BUT9 160 aaKnown RBP16.37■□□□□ 0.21
PDLIM3-203ENST00000284771 A0A087X0K7 114 aa16.36■□□□□ 0.21
PDLIM3-203ENST00000284771 SLC17A3O00476 420 aa16.36■□□□□ 0.21
PDLIM3-203ENST00000284771 TSPAN4O14817 238 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms