RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 DEFB131AP59861 70 aa9.67□□□□□ -0.86
SHPRH-201ENST00000275233 MEGF9Q9H1U4 602 aa9.67□□□□□ -0.86
SHPRH-201ENST00000275233 KNCNA6PVL3 124 aa9.67□□□□□ -0.86
SHPRH-201ENST00000275233 CSTL1Q9H114 145 aa9.67□□□□□ -0.86
SHPRH-201ENST00000275233 INS-IGF2F8WCM5 200 aa9.67□□□□□ -0.86
SHPRH-201ENST00000275233 INSP01308 110 aa9.67□□□□□ -0.86
SHPRH-201ENST00000275233 SPSB3Q6PJ21 355 aa9.67□□□□□ -0.86
SHPRH-201ENST00000275233 GNB1LQ9BYB4 327 aa9.67□□□□□ -0.86
SHPRH-201ENST00000275233 GGTLC3B5MD39 225 aa9.67□□□□□ -0.86
SHPRH-201ENST00000275233 IGKV1-16P04430 117 aa9.67□□□□□ -0.86
SHPRH-201ENST00000275233 BMPERQ8N8U9 685 aa9.67□□□□□ -0.86
SHPRH-201ENST00000275233 FBLN5Q9UBX5 448 aa9.67□□□□□ -0.86
SHPRH-201ENST00000275233 CLDN16Q9Y5I7 305 aa9.67□□□□□ -0.86
SHPRH-201ENST00000275233 Q6ZS92 163 aa9.67□□□□□ -0.86
SHPRH-201ENST00000275233 CDK2AP2O75956 126 aa9.66□□□□□ -0.86
SHPRH-201ENST00000275233 DKK1O94907 266 aa9.66□□□□□ -0.86
SHPRH-201ENST00000275233 TRGV9Q99603 122 aa9.66□□□□□ -0.86
SHPRH-201ENST00000275233 TICRRQ7Z2Z1 1910 aa9.66□□□□□ -0.86
SHPRH-201ENST00000275233 CMC4P56277 68 aaPredicted RBP9.66□□□□□ -0.86
SHPRH-201ENST00000275233 C17orf82Q86X59 251 aaPredicted RBP9.66□□□□□ -0.86
SHPRH-201ENST00000275233 XCL2Q9UBD3 114 aa9.66□□□□□ -0.86
SHPRH-201ENST00000275233 LAMTOR2Q9Y2Q5 125 aa9.66□□□□□ -0.86
SHPRH-201ENST00000275233 KIAA2026Q5HYC2 2103 aa9.66□□□□□ -0.86
SHPRH-201ENST00000275233 AGMATQ9BSE5 352 aa9.66□□□□□ -0.86
SHPRH-201ENST00000275233 PPBPP02775 128 aa9.66□□□□□ -0.86
SHPRH-201ENST00000275233 SUPT4H1P63272 117 aaKnown RBP9.66□□□□□ -0.86
SHPRH-201ENST00000275233 MCRIP2Q9BUT9 160 aaKnown RBP9.66□□□□□ -0.86
SHPRH-201ENST00000275233 CXCL1P09341 107 aa9.66□□□□□ -0.86
SHPRH-201ENST00000275233 TEX43Q6ZNM6 134 aa9.66□□□□□ -0.86
SHPRH-201ENST00000275233 C5orf30Q96GV9 206 aa9.66□□□□□ -0.86
SHPRH-201ENST00000275233 SLC25A16P16260 332 aa9.66□□□□□ -0.86
SHPRH-201ENST00000275233 MSMBP08118 114 aa9.65□□□□□ -0.86
SHPRH-201ENST00000275233 PSG3Q16557 428 aa9.65□□□□□ -0.86
SHPRH-201ENST00000275233 GLRX5Q86SX6 157 aa9.65□□□□□ -0.86
SHPRH-201ENST00000275233 ZNF625Q96I27 306 aaPredicted RBP9.65□□□□□ -0.86
SHPRH-201ENST00000275233 TRAV8-4A0A0B4J246 113 aa9.65□□□□□ -0.86
SHPRH-201ENST00000275233 FAM223BA6NKX1 122 aa9.65□□□□□ -0.86
SHPRH-201ENST00000275233 C6orf226Q5I0X4 101 aa9.65□□□□□ -0.86
SHPRH-201ENST00000275233 FAM223AQ8IWN6 122 aa9.65□□□□□ -0.86
SHPRH-201ENST00000275233 C1orf122Q6ZSJ8 110 aa9.65□□□□□ -0.86
SHPRH-201ENST00000275233 LAMTOR3Q9UHA4 124 aa9.65□□□□□ -0.86
SHPRH-201ENST00000275233 RNF114Q9Y508 228 aa9.65□□□□□ -0.86
SHPRH-201ENST00000275233 LRRK1Q38SD2 2015 aa9.65□□□□□ -0.86
SHPRH-201ENST00000275233 MORN3Q6PF18 240 aaPredicted RBP9.65□□□□□ -0.87
SHPRH-201ENST00000275233 RNF166Q96A37 237 aaPredicted RBP9.65□□□□□ -0.87
SHPRH-201ENST00000275233 USMG5Q96IX5 58 aa9.65□□□□□ -0.87
SHPRH-201ENST00000275233 DOCK8Q8NF50 2099 aa9.65□□□□□ -0.87
SHPRH-201ENST00000275233 K7ENP7 123 aa9.65□□□□□ -0.87
SHPRH-201ENST00000275233 STAG3L3P0CL85 134 aa9.65□□□□□ -0.87
SHPRH-201ENST00000275233 HS3ST6Q96QI5 342 aa9.65□□□□□ -0.87
SHPRH-201ENST00000275233 KLK9Q9UKQ9 250 aa9.65□□□□□ -0.87
SHPRH-201ENST00000275233 CHCHD1Q96BP2 118 aaKnown RBP9.64□□□□□ -0.87
SHPRH-201ENST00000275233 TRAV9-2A0A087WT02 112 aa9.64□□□□□ -0.87
SHPRH-201ENST00000275233 ATP6V0E1O15342 81 aa9.64□□□□□ -0.87
SHPRH-201ENST00000275233 HIST1H2BKO60814 126 aa9.64□□□□□ -0.87
SHPRH-201ENST00000275233 HIST1H2BJP06899 126 aa9.64□□□□□ -0.87
SHPRH-201ENST00000275233 HIST1H2BOP23527 126 aa9.64□□□□□ -0.87
SHPRH-201ENST00000275233 HIST1H2BBP33778 126 aa9.64□□□□□ -0.87
SHPRH-201ENST00000275233 HIST1H2BDP58876 126 aa9.64□□□□□ -0.87
SHPRH-201ENST00000275233 HIST1H2BCP62807 126 aa9.64□□□□□ -0.87
SHPRH-201ENST00000275233 SSBP2P81877 361 aaPredicted RBP9.64□□□□□ -0.87
SHPRH-201ENST00000275233 HIST2H2BEQ16778 126 aa9.64□□□□□ -0.87
SHPRH-201ENST00000275233 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.64□□□□□ -0.87
SHPRH-201ENST00000275233 HIST1H2BHQ93079 126 aa9.64□□□□□ -0.87
SHPRH-201ENST00000275233 HIST1H2BNQ99877 126 aa9.64□□□□□ -0.87
SHPRH-201ENST00000275233 HIST1H2BMQ99879 126 aa9.64□□□□□ -0.87
SHPRH-201ENST00000275233 F5H768 121 aa9.64□□□□□ -0.87
SHPRH-201ENST00000275233 TOMM40O96008 361 aa9.64□□□□□ -0.87
SHPRH-201ENST00000275233 TMEM155Q4W5P6 130 aa9.64□□□□□ -0.87
SHPRH-201ENST00000275233 NUP35Q8NFH5 326 aa9.64□□□□□ -0.87
SHPRH-201ENST00000275233 hDV102S1A0JD36 115 aa9.64□□□□□ -0.87
SHPRH-201ENST00000275233 DUX4L9Q6RFH8 374 aaPredicted RBP9.64□□□□□ -0.87
SHPRH-201ENST00000275233 ERG28Q9UKR5 140 aa9.64□□□□□ -0.87
SHPRH-201ENST00000275233 C9orf139Q6ZV77 190 aa9.63□□□□□ -0.87
SHPRH-201ENST00000275233 SPINK13Q1W4C9 94 aa9.63□□□□□ -0.87
SHPRH-201ENST00000275233 DOCK7Q96N67 2140 aa9.63□□□□□ -0.87
SHPRH-201ENST00000275233 GBF1Q92538 1859 aa9.63□□□□□ -0.87
SHPRH-201ENST00000275233 PCP4P48539 62 aa9.63□□□□□ -0.87
SHPRH-201ENST00000275233 MBD3L1Q8WWY6 194 aa9.63□□□□□ -0.87
SHPRH-201ENST00000275233 SPXQ9BT56 116 aa9.63□□□□□ -0.87
SHPRH-201ENST00000275233 A0A0G2JRQ6 117 aa9.63□□□□□ -0.87
SHPRH-201ENST00000275233 A6NNC1 897 aa9.63□□□□□ -0.87
SHPRH-201ENST00000275233 G3V318 75 aa9.63□□□□□ -0.87
SHPRH-201ENST00000275233 LINC00479Q96M42 142 aa9.63□□□□□ -0.87
SHPRH-201ENST00000275233 OOSP1A8MZH6 123 aa9.63□□□□□ -0.87
SHPRH-201ENST00000275233 ORAOV1Q8WV07 137 aa9.63□□□□□ -0.87
SHPRH-201ENST00000275233 PTPRDP23468 1912 aa9.63□□□□□ -0.87
SHPRH-201ENST00000275233 CACNA1GO43497 2377 aa9.63□□□□□ -0.87
SHPRH-201ENST00000275233 C8orf49Q96NF6 230 aa9.62□□□□□ -0.87
SHPRH-201ENST00000275233 VWA8A3KMH1 1905 aa9.62□□□□□ -0.87
SHPRH-201ENST00000275233 RPP25LQ8N5L8 163 aaKnown RBP9.62□□□□□ -0.87
SHPRH-201ENST00000275233 COL6A6A6NMZ7 2263 aa9.62□□□□□ -0.87
SHPRH-201ENST00000275233 IGHG3P01860 377 aa9.62□□□□□ -0.87
SHPRH-201ENST00000275233 HIST1H4AP62805 103 aaKnown RBP9.62□□□□□ -0.87
SHPRH-201ENST00000275233 MRAPQ8TCY5 172 aa9.62□□□□□ -0.87
SHPRH-201ENST00000275233 FNDC1Q4ZHG4 1894 aaPredicted RBP9.62□□□□□ -0.87
SHPRH-201ENST00000275233 LHFPL1Q86WI0 220 aa9.62□□□□□ -0.87
SHPRH-201ENST00000275233 TMEM158Q8WZ71 300 aa9.62□□□□□ -0.87
SHPRH-201ENST00000275233 AMN1Q8IY45 258 aa9.62□□□□□ -0.87
SHPRH-201ENST00000275233 DAZ1Q9NQZ3 744 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms