RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 OR7C2O60412 319 aa11.3□□□□□ -0.6
TRIM23-202ENST00000274327 SCGB2A1O75556 95 aa11.3□□□□□ -0.6
TRIM23-202ENST00000274327 CD99P14209 185 aa11.3□□□□□ -0.6
TRIM23-202ENST00000274327 ADMP35318 185 aa11.3□□□□□ -0.6
TRIM23-202ENST00000274327 SRP14P37108 136 aaKnown RBP11.3□□□□□ -0.6
TRIM23-202ENST00000274327 UBE2G2P60604 165 aa11.3□□□□□ -0.6
TRIM23-202ENST00000274327 CCDC140Q96MF4 163 aa11.3□□□□□ -0.6
TRIM23-202ENST00000274327 ATP6V0BQ99437 205 aa11.3□□□□□ -0.6
TRIM23-202ENST00000274327 SMIM7Q9BQ49 75 aa11.3□□□□□ -0.6
TRIM23-202ENST00000274327 GPR61Q9BZJ8 451 aa11.3□□□□□ -0.6
TRIM23-202ENST00000274327 TRBV7-1A0A0A6YYK4 115 aa11.29□□□□□ -0.6
TRIM23-202ENST00000274327 C11orf94C9JXX5 98 aa11.29□□□□□ -0.6
TRIM23-202ENST00000274327 IGLV1-40P01703 118 aa11.29□□□□□ -0.6
TRIM23-202ENST00000274327 TYMSP04818 313 aa11.29□□□□□ -0.6
TRIM23-202ENST00000274327 PFN1P07737 140 aaKnown RBP11.29□□□□□ -0.6
TRIM23-202ENST00000274327 ATP5G3P48201 142 aa11.29□□□□□ -0.6
TRIM23-202ENST00000274327 ATP5G2Q06055 141 aa11.29□□□□□ -0.6
TRIM23-202ENST00000274327 REC114Q7Z4M0 266 aa11.29□□□□□ -0.6
TRIM23-202ENST00000274327 TMEM86BQ8N661 226 aa11.29□□□□□ -0.6
TRIM23-202ENST00000274327 OR4F5Q8NH21 305 aa11.29□□□□□ -0.6
TRIM23-202ENST00000274327 RNF125Q96EQ8 232 aa11.29□□□□□ -0.6
TRIM23-202ENST00000274327 PACRGQ96M98 296 aaPredicted RBP11.29□□□□□ -0.6
TRIM23-202ENST00000274327 OR4F4Q96R69 305 aa11.29□□□□□ -0.6
TRIM23-202ENST00000274327 IMMP2LQ96T52 175 aa11.29□□□□□ -0.6
TRIM23-202ENST00000274327 CHRDL1Q9BU40 450 aa11.29□□□□□ -0.6
TRIM23-202ENST00000274327 YAE1D1Q9NRH1 226 aa11.29□□□□□ -0.6
TRIM23-202ENST00000274327 YTHDF2Q9Y5A9 579 aaKnown RBP11.29□□□□□ -0.6
TRIM23-202ENST00000274327 TRGV3P03979 118 aa11.28□□□□□ -0.6
TRIM23-202ENST00000274327 JOSD1Q15040 202 aaPredicted RBP11.28□□□□□ -0.6
TRIM23-202ENST00000274327 ZNF600Q6ZNG1 722 aa11.28□□□□□ -0.6
TRIM23-202ENST00000274327 PAXXQ9BUH6 204 aa11.28□□□□□ -0.6
TRIM23-202ENST00000274327 SLC25A39Q9BZJ4 359 aaPredicted RBP11.28□□□□□ -0.6
TRIM23-202ENST00000274327 PPP5D1E7EU14 171 aa11.28□□□□□ -0.6
TRIM23-202ENST00000274327 H7BYZ3 331 aa11.28□□□□□ -0.6
TRIM23-202ENST00000274327 GCGP01275 180 aa11.28□□□□□ -0.6
TRIM23-202ENST00000274327 IL4P05112 153 aa11.28□□□□□ -0.6
TRIM23-202ENST00000274327 GPR183P32249 361 aa11.28□□□□□ -0.6
TRIM23-202ENST00000274327 CST9LP1Q5W188 147 aa11.28□□□□□ -0.6
TRIM23-202ENST00000274327 STXBP6Q8NFX7 210 aa11.28□□□□□ -0.6
TRIM23-202ENST00000274327 FXYD5Q96DB9 178 aa11.28□□□□□ -0.6
TRIM23-202ENST00000274327 HIST1H2BLQ99880 126 aa11.28□□□□□ -0.6
TRIM23-202ENST00000274327 ZNF702PQ9H963 129 aa11.28□□□□□ -0.6
TRIM23-202ENST00000274327 H3BRN7 92 aa11.27□□□□□ -0.61
TRIM23-202ENST00000274327 CLEC3BP05452 202 aa11.27□□□□□ -0.61
TRIM23-202ENST00000274327 OR10J4P0C629 311 aa11.27□□□□□ -0.61
TRIM23-202ENST00000274327 PYYP10082 97 aa11.27□□□□□ -0.61
TRIM23-202ENST00000274327 USF2Q15853 346 aaPredicted RBP11.27□□□□□ -0.61
TRIM23-202ENST00000274327 TMEM95Q3KNT9 176 aa11.27□□□□□ -0.61
TRIM23-202ENST00000274327 USMG5Q96IX5 58 aa11.27□□□□□ -0.61
TRIM23-202ENST00000274327 PRSS22Q9GZN4 317 aa11.27□□□□□ -0.61
TRIM23-202ENST00000274327 TMEM160Q9NX00 188 aa11.27□□□□□ -0.61
TRIM23-202ENST00000274327 A0A1W2PRE2 83 aa11.26□□□□□ -0.61
TRIM23-202ENST00000274327 F6UZH7 168 aa11.26□□□□□ -0.61
TRIM23-202ENST00000274327 PDE6DO43924 150 aa11.26□□□□□ -0.61
TRIM23-202ENST00000274327 GGCTO75223 188 aaKnown RBP11.26□□□□□ -0.61
TRIM23-202ENST00000274327 NPPCP23582 126 aa11.26□□□□□ -0.61
TRIM23-202ENST00000274327 DDTP30046 118 aa11.26□□□□□ -0.61
TRIM23-202ENST00000274327 TPPP2P59282 170 aa11.26□□□□□ -0.61
TRIM23-202ENST00000274327 UBE2L3P68036 154 aaKnown RBP11.26□□□□□ -0.61
TRIM23-202ENST00000274327 KCNIP4Q6PIL6 250 aa11.26□□□□□ -0.61
TRIM23-202ENST00000274327 CLEC19AQ6UXS0 136 aa11.26□□□□□ -0.61
TRIM23-202ENST00000274327 SHANK2-AS3Q9BTD1 123 aa11.26□□□□□ -0.61
TRIM23-202ENST00000274327 NPFFR1Q9GZQ6 430 aa11.26□□□□□ -0.61
TRIM23-202ENST00000274327 GP9P14770 177 aa11.25□□□□□ -0.61
TRIM23-202ENST00000274327 FABP4P15090 132 aa11.25□□□□□ -0.61
TRIM23-202ENST00000274327 RPL23P62829 140 aaKnown RBP11.25□□□□□ -0.61
TRIM23-202ENST00000274327 TMEM14CQ9P0S9 112 aa11.25□□□□□ -0.61
TRIM23-202ENST00000274327 TMEM89A2RUT3 159 aa11.25□□□□□ -0.61
TRIM23-202ENST00000274327 IGHG4P01861 327 aa11.25□□□□□ -0.61
TRIM23-202ENST00000274327 GALR1P47211 349 aa11.25□□□□□ -0.61
TRIM23-202ENST00000274327 ADIRFQ15847 76 aa11.25□□□□□ -0.61
TRIM23-202ENST00000274327 Q8N2B8 174 aa11.25□□□□□ -0.61
TRIM23-202ENST00000274327 KLK15Q9H2R5 256 aa11.25□□□□□ -0.61
TRIM23-202ENST00000274327 ZFAND3Q9H8U3 227 aa11.25□□□□□ -0.61
TRIM23-202ENST00000274327 MXRA5Q9NR99 2828 aa11.25□□□□□ -0.61
TRIM23-202ENST00000274327 TLN2Q9Y4G6 2542 aa11.25□□□□□ -0.61
TRIM23-202ENST00000274327 PF4V1P10720 104 aa11.24□□□□□ -0.61
TRIM23-202ENST00000274327 HNF1AP20823 631 aa11.24□□□□□ -0.61
TRIM23-202ENST00000274327 RAB9AP51151 201 aa11.24□□□□□ -0.61
TRIM23-202ENST00000274327 LEMD1Q68G75 181 aa11.24□□□□□ -0.61
TRIM23-202ENST00000274327 C11orf52Q96A22 123 aa11.24□□□□□ -0.61
TRIM23-202ENST00000274327 C14orf144Q96I85 54 aa11.24□□□□□ -0.61
TRIM23-202ENST00000274327 PARLQ9H300 379 aa11.24□□□□□ -0.61
TRIM23-202ENST00000274327 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.23□□□□□ -0.61
TRIM23-202ENST00000274327 PSMB8P28062 276 aa11.23□□□□□ -0.61
TRIM23-202ENST00000274327 ACTL10Q5JWF8 245 aa11.23□□□□□ -0.61
TRIM23-202ENST00000274327 TOMM20LQ6UXN7 152 aa11.23□□□□□ -0.61
TRIM23-202ENST00000274327 S100A7AQ86SG5 101 aa11.23□□□□□ -0.61
TRIM23-202ENST00000274327 RPUSD4Q96CM3 377 aaKnown RBP11.23□□□□□ -0.61
TRIM23-202ENST00000274327 MYO9AB2RTY4 2548 aa11.23□□□□□ -0.61
TRIM23-202ENST00000274327 SCO2A0A1W2PP80 73 aa11.23□□□□□ -0.61
TRIM23-202ENST00000274327 GGTLC3B5MD39 225 aa11.23□□□□□ -0.61
TRIM23-202ENST00000274327 RAB4BP61018 213 aa11.23□□□□□ -0.61
TRIM23-202ENST00000274327 GFI1BQ5VTD9 330 aa11.23□□□□□ -0.61
TRIM23-202ENST00000274327 TMEM18Q96B42 140 aa11.23□□□□□ -0.61
TRIM23-202ENST00000274327 DUX5Q96PT3 197 aa11.23□□□□□ -0.61
TRIM23-202ENST00000274327 ACANP16112 2415 aa11.23□□□□□ -0.61
TRIM23-202ENST00000274327 TRAV9-1A0A075B6T8 112 aa11.22□□□□□ -0.61
TRIM23-202ENST00000274327 A0A0G2JLM5 398 aa11.22□□□□□ -0.61
TRIM23-202ENST00000274327 MRPS12O15235 138 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms