RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 PATE2Q6UY27 113 aa10.34□□□□□ -0.75
HERC6-202ENST00000273960 C11orf53Q8IXP5 236 aa10.34□□□□□ -0.75
HERC6-202ENST00000273960 FAM169BQ8N8A8 192 aa10.34□□□□□ -0.75
HERC6-202ENST00000273960 ATMQ13315 3056 aa10.34□□□□□ -0.75
HERC6-202ENST00000273960 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.34□□□□□ -0.75
HERC6-202ENST00000273960 NDUFS8O00217 210 aa10.34□□□□□ -0.75
HERC6-202ENST00000273960 CYC1P08574 325 aa10.34□□□□□ -0.75
HERC6-202ENST00000273960 SPRNQ5BIV9 151 aa10.34□□□□□ -0.75
HERC6-202ENST00000273960 RBPMS2Q6ZRY4 209 aaKnown RBP10.34□□□□□ -0.75
HERC6-202ENST00000273960 STXBP6Q8NFX7 210 aa10.34□□□□□ -0.75
HERC6-202ENST00000273960 LINC01545Q5VT33 79 aa10.34□□□□□ -0.75
HERC6-202ENST00000273960 ZADH2Q8N4Q0 377 aa10.34□□□□□ -0.75
HERC6-202ENST00000273960 GPR82Q96P67 336 aa10.34□□□□□ -0.75
HERC6-202ENST00000273960 INSIG2Q9Y5U4 225 aa10.34□□□□□ -0.75
HERC6-202ENST00000273960 ADAMTS20P59510 1910 aa10.34□□□□□ -0.75
HERC6-202ENST00000273960 SMIM13P0DJ93 91 aa10.33□□□□□ -0.76
HERC6-202ENST00000273960 FAM162BQ5T6X4 162 aa10.33□□□□□ -0.76
HERC6-202ENST00000273960 OR1L4Q8NGR5 311 aa10.33□□□□□ -0.76
HERC6-202ENST00000273960 RUSC1-AS1Q66K80 236 aa10.33□□□□□ -0.76
HERC6-202ENST00000273960 CCDC144NLQ6NUI1 221 aa10.33□□□□□ -0.76
HERC6-202ENST00000273960 SMAD7O15105 426 aaKnown RBP10.32□□□□□ -0.76
HERC6-202ENST00000273960 SS18L1O75177 396 aaPredicted RBP10.32□□□□□ -0.76
HERC6-202ENST00000273960 ZNF883P0CG24 379 aa10.32□□□□□ -0.76
HERC6-202ENST00000273960 ITLN1Q8WWA0 313 aa10.32□□□□□ -0.76
HERC6-202ENST00000273960 CALYQ9NYX4 217 aa10.32□□□□□ -0.76
HERC6-202ENST00000273960 NRN1LQ496H8 165 aa10.32□□□□□ -0.76
HERC6-202ENST00000273960 WDR31Q8NA23 367 aa10.32□□□□□ -0.76
HERC6-202ENST00000273960 TMEM14BQ9NUH8 114 aa10.32□□□□□ -0.76
HERC6-202ENST00000273960 IGHV3-72A0A0B4J1Y9 119 aa10.32□□□□□ -0.76
HERC6-202ENST00000273960 D6R8Y8 96 aa10.32□□□□□ -0.76
HERC6-202ENST00000273960 SPRY3O43610 288 aa10.32□□□□□ -0.76
HERC6-202ENST00000273960 RASL11AQ6T310 242 aa10.32□□□□□ -0.76
HERC6-202ENST00000273960 SPRR3Q9UBC9 169 aa10.32□□□□□ -0.76
HERC6-202ENST00000273960 SAA1P0DJI8 122 aaPredicted RBP10.31□□□□□ -0.76
HERC6-202ENST00000273960 FXYD5Q96DB9 178 aa10.31□□□□□ -0.76
HERC6-202ENST00000273960 ZNF414Q96IQ9 312 aa10.31□□□□□ -0.76
HERC6-202ENST00000273960 TMEM213A2RRL7 107 aa10.31□□□□□ -0.76
HERC6-202ENST00000273960 SLC25A17O43808 307 aa10.31□□□□□ -0.76
HERC6-202ENST00000273960 FGF6P10767 208 aa10.31□□□□□ -0.76
HERC6-202ENST00000273960 WT1P19544 449 aaPredicted RBP10.31□□□□□ -0.76
HERC6-202ENST00000273960 CD69Q07108 199 aa10.31□□□□□ -0.76
HERC6-202ENST00000273960 MOGAT3Q86VF5 341 aa10.31□□□□□ -0.76
HERC6-202ENST00000273960 IGKV1D-17A0A075B6S4 117 aa10.31□□□□□ -0.76
HERC6-202ENST00000273960 RNASE2P10153 161 aaKnown RBP10.31□□□□□ -0.76
HERC6-202ENST00000273960 GTSCR1Q86UQ5 136 aa10.31□□□□□ -0.76
HERC6-202ENST00000273960 AMN1Q8IY45 258 aa10.31□□□□□ -0.76
HERC6-202ENST00000273960 SVIPQ8NHG7 77 aa10.31□□□□□ -0.76
HERC6-202ENST00000273960 PSMB11A5LHX3 300 aa10.3□□□□□ -0.76
HERC6-202ENST00000273960 TGFAP01135 160 aa10.3□□□□□ -0.76
HERC6-202ENST00000273960 FAM231DQ6ZW35 169 aa10.3□□□□□ -0.76
HERC6-202ENST00000273960 HARBI1Q96MB7 349 aa10.3□□□□□ -0.76
HERC6-202ENST00000273960 LINC00470Q9BZP3 86 aa10.3□□□□□ -0.76
HERC6-202ENST00000273960 TRGV8A0A0C4DH27 118 aa10.3□□□□□ -0.76
HERC6-202ENST00000273960 KBTBD11-OT1A0A1B0GTJ5 212 aa10.3□□□□□ -0.76
HERC6-202ENST00000273960 PRSS1P07477 247 aa10.3□□□□□ -0.76
HERC6-202ENST00000273960 ANXA2RQ3ZCQ2 193 aa10.3□□□□□ -0.76
HERC6-202ENST00000273960 ATP5L2Q7Z4Y8 100 aa10.3□□□□□ -0.76
HERC6-202ENST00000273960 PIP4P2Q8N4L2 257 aa10.3□□□□□ -0.76
HERC6-202ENST00000273960 Q9H3A6 140 aa10.3□□□□□ -0.76
HERC6-202ENST00000273960 IGKV2D-26A0A0A0MRZ7 120 aa10.3□□□□□ -0.76
HERC6-202ENST00000273960 LYZP61626 148 aa10.3□□□□□ -0.76
HERC6-202ENST00000273960 PLA2G2CQ5R387 149 aa10.3□□□□□ -0.76
HERC6-202ENST00000273960 OR5A1Q8NGJ0 315 aa10.3□□□□□ -0.76
HERC6-202ENST00000273960 CXXC4Q9H2H0 198 aa10.3□□□□□ -0.76
HERC6-202ENST00000273960 ZNF71Q9NQZ8 489 aaPredicted RBP10.3□□□□□ -0.76
HERC6-202ENST00000273960 FOXA2Q9Y261 457 aaPredicted RBP10.3□□□□□ -0.76
HERC6-202ENST00000273960 SSUH2Q9Y2M2 353 aa10.3□□□□□ -0.76
HERC6-202ENST00000273960 ENSAO43768 121 aaKnown RBP10.29□□□□□ -0.76
HERC6-202ENST00000273960 LOXL3P58215 753 aa10.29□□□□□ -0.76
HERC6-202ENST00000273960 ERHP84090 104 aaKnown RBP10.29□□□□□ -0.76
HERC6-202ENST00000273960 CD300EQ496F6 205 aaPredicted RBP10.29□□□□□ -0.76
HERC6-202ENST00000273960 SPAG8Q99932 426 aaPredicted RBP10.29□□□□□ -0.76
HERC6-202ENST00000273960 A0A1B0GUT8 65 aa10.29□□□□□ -0.76
HERC6-202ENST00000273960 C20orf78Q9BR46 151 aa10.29□□□□□ -0.76
HERC6-202ENST00000273960 GEMIN7Q9H840 131 aaKnown RBP10.29□□□□□ -0.76
HERC6-202ENST00000273960 PRNDQ9UKY0 176 aa10.29□□□□□ -0.76
HERC6-202ENST00000273960 S4R3C0 116 aa10.29□□□□□ -0.76
HERC6-202ENST00000273960 PTPRBP23467 1997 aa10.29□□□□□ -0.76
HERC6-202ENST00000273960 IGKV3D-15A0A087WSY6 115 aa10.28□□□□□ -0.76
HERC6-202ENST00000273960 PRCDQ00LT1 54 aa10.28□□□□□ -0.76
HERC6-202ENST00000273960 A0A1B0GWB2 263 aa10.28□□□□□ -0.76
HERC6-202ENST00000273960 GATA3P23771 443 aa10.28□□□□□ -0.76
HERC6-202ENST00000273960 SS18L2Q9UHA2 77 aa10.28□□□□□ -0.76
HERC6-202ENST00000273960 UPK2O00526 184 aa10.28□□□□□ -0.76
HERC6-202ENST00000273960 SIGLEC8Q9NYZ4 499 aa10.28□□□□□ -0.76
HERC6-202ENST00000273960 JPT1Q9UK76 154 aa10.28□□□□□ -0.76
HERC6-202ENST00000273960 AKAP13Q12802 2813 aa10.28□□□□□ -0.76
HERC6-202ENST00000273960 ZNF292O60281 2723 aa10.27□□□□□ -0.76
HERC6-202ENST00000273960 ABHD17AQ96GS6 310 aa10.27□□□□□ -0.76
HERC6-202ENST00000273960 C17orf77Q96MU5 243 aa10.27□□□□□ -0.76
HERC6-202ENST00000273960 C7orf69Q9H7B7 122 aa10.27□□□□□ -0.76
HERC6-202ENST00000273960 EVI2AP22794 236 aa10.27□□□□□ -0.77
HERC6-202ENST00000273960 DIAPH2-AS1Q14236 149 aa10.27□□□□□ -0.77
HERC6-202ENST00000273960 BOD1L2Q8IYS8 172 aa10.27□□□□□ -0.77
HERC6-202ENST00000273960 CCL13Q99616 98 aa10.27□□□□□ -0.77
HERC6-202ENST00000273960 VGLL1Q99990 258 aa10.27□□□□□ -0.77
HERC6-202ENST00000273960 TCRAP04437 139 aa10.27□□□□□ -0.77
HERC6-202ENST00000273960 IGHV1-2P23083 117 aa10.27□□□□□ -0.77
HERC6-202ENST00000273960 PRELID3AQ96N28 172 aa10.27□□□□□ -0.77
HERC6-202ENST00000273960 NDFIP1Q9BT67 221 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms