RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 DNAJC9-AS1A6NH13 148 aa12.61□□□□□ -0.39
TPM1-201ENST00000267996 TRBV12-3P01733 135 aa12.61□□□□□ -0.39
TPM1-201ENST00000267996 ARL3P36405 182 aa12.61□□□□□ -0.39
TPM1-201ENST00000267996 RANP62826 216 aaKnown RBP12.61□□□□□ -0.39
TPM1-201ENST00000267996 FOXE3Q13461 319 aa12.61□□□□□ -0.39
TPM1-201ENST00000267996 RNF152Q8N8N0 203 aa12.61□□□□□ -0.39
TPM1-201ENST00000267996 OR4X2Q8NGF9 303 aa12.61□□□□□ -0.39
TPM1-201ENST00000267996 MYOZ3Q8TDC0 251 aa12.61□□□□□ -0.39
TPM1-201ENST00000267996 TMEM190Q8WZ59 177 aa12.61□□□□□ -0.39
TPM1-201ENST00000267996 TUBA4BQ9H853 241 aa12.61□□□□□ -0.39
TPM1-201ENST00000267996 SERTAD4Q9NUC0 356 aa12.61□□□□□ -0.39
TPM1-201ENST00000267996 TRBV19A0A075B6N1 114 aa12.61□□□□□ -0.39
TPM1-201ENST00000267996 CLDN34H7C241 214 aa12.61□□□□□ -0.39
TPM1-201ENST00000267996 ELANEP08246 267 aa12.61□□□□□ -0.39
TPM1-201ENST00000267996 SNRPCP09234 159 aaKnown RBP12.61□□□□□ -0.39
TPM1-201ENST00000267996 SLC35B1P78383 322 aa12.61□□□□□ -0.39
TPM1-201ENST00000267996 FAM209BQ5JX69 171 aa12.61□□□□□ -0.39
TPM1-201ENST00000267996 C10orf99Q6UWK7 81 aa12.61□□□□□ -0.39
TPM1-201ENST00000267996 OR4F17Q8NGA8 305 aa12.61□□□□□ -0.39
TPM1-201ENST00000267996 U3KQE9 123 aa12.61□□□□□ -0.39
TPM1-201ENST00000267996 C9JCJ5 164 aa12.6□□□□□ -0.39
TPM1-201ENST00000267996 TSPAN4O14817 238 aa12.6□□□□□ -0.39
TPM1-201ENST00000267996 IGHV3-11P01762 117 aa12.6□□□□□ -0.39
TPM1-201ENST00000267996 RPL7P18124 248 aaKnown RBP12.6□□□□□ -0.39
TPM1-201ENST00000267996 SCGB2A2Q13296 93 aa12.6□□□□□ -0.39
TPM1-201ENST00000267996 TEX38Q6PEX7 206 aa12.6□□□□□ -0.39
TPM1-201ENST00000267996 ESM1Q9NQ30 184 aa12.6□□□□□ -0.39
TPM1-201ENST00000267996 OTORQ9NRC9 128 aa12.6□□□□□ -0.39
TPM1-201ENST00000267996 PGPA6NDG6 321 aa12.59□□□□□ -0.39
TPM1-201ENST00000267996 NDUFA4O00483 81 aa12.59□□□□□ -0.39
TPM1-201ENST00000267996 BUB3O43684 328 aa12.59□□□□□ -0.39
TPM1-201ENST00000267996 RPL35P42766 123 aaKnown RBP12.59□□□□□ -0.39
TPM1-201ENST00000267996 ADIRFQ15847 76 aa12.59□□□□□ -0.39
TPM1-201ENST00000267996 LINC01551Q86U37 167 aa12.59□□□□□ -0.39
TPM1-201ENST00000267996 HIST1H2BAQ96A08 127 aa12.59□□□□□ -0.39
TPM1-201ENST00000267996 Q9H3A6 140 aa12.59□□□□□ -0.39
TPM1-201ENST00000267996 EPDR1Q9UM22 224 aa12.59□□□□□ -0.39
TPM1-201ENST00000267996 LY96Q9Y6Y9 160 aa12.59□□□□□ -0.39
TPM1-201ENST00000267996 OTOGQ6ZRI0 2925 aa12.59□□□□□ -0.39
TPM1-201ENST00000267996 IGHV3OR16-8A0A075B7F1 116 aa12.58□□□□□ -0.4
TPM1-201ENST00000267996 HELTA6NFD8 242 aa12.58□□□□□ -0.4
TPM1-201ENST00000267996 H3BTX0 84 aa12.58□□□□□ -0.4
TPM1-201ENST00000267996 PEX7O00628 323 aa12.58□□□□□ -0.4
TPM1-201ENST00000267996 LY6G6DO95868 133 aa12.58□□□□□ -0.4
TPM1-201ENST00000267996 PDE6HQ13956 83 aa12.58□□□□□ -0.4
TPM1-201ENST00000267996 LYPD1Q8N2G4 141 aa12.58□□□□□ -0.4
TPM1-201ENST00000267996 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.58□□□□□ -0.4
TPM1-201ENST00000267996 SMR3AQ99954 134 aa12.58□□□□□ -0.4
TPM1-201ENST00000267996 TMEM242Q9NWH2 141 aa12.58□□□□□ -0.4
TPM1-201ENST00000267996 FAM181BA6NEQ2 426 aa12.57□□□□□ -0.4
TPM1-201ENST00000267996 RPL15P61313 204 aaKnown RBP12.57□□□□□ -0.4
TPM1-201ENST00000267996 C1orf194Q5T5A4 169 aa12.57□□□□□ -0.4
TPM1-201ENST00000267996 C5orf17Q8NAS9 161 aa12.57□□□□□ -0.4
TPM1-201ENST00000267996 C17orf77Q96MU5 243 aa12.57□□□□□ -0.4
TPM1-201ENST00000267996 METTL26Q96S19 204 aa12.57□□□□□ -0.4
TPM1-201ENST00000267996 PEF1Q9UBV8 284 aaKnown RBP12.57□□□□□ -0.4
TPM1-201ENST00000267996 SMAD5-AS1Q9Y6J3 95 aa12.57□□□□□ -0.4
TPM1-201ENST00000267996 GGCTO75223 188 aaKnown RBP12.57□□□□□ -0.4
TPM1-201ENST00000267996 SLC25A5P05141 298 aaKnown RBP12.57□□□□□ -0.4
TPM1-201ENST00000267996 TAS2R60P59551 318 aa12.57□□□□□ -0.4
TPM1-201ENST00000267996 SIGLEC15Q6ZMC9 328 aa12.57□□□□□ -0.4
TPM1-201ENST00000267996 OR8I2Q8N0Y5 310 aa12.57□□□□□ -0.4
TPM1-201ENST00000267996 CTDSP1Q9GZU7 261 aa12.57□□□□□ -0.4
TPM1-201ENST00000267996 PRELID1Q9Y255 219 aa12.57□□□□□ -0.4
TPM1-201ENST00000267996 MTORP42345 2549 aa12.56□□□□□ -0.4
TPM1-201ENST00000267996 RPLP1P05386 114 aaKnown RBP12.56□□□□□ -0.4
TPM1-201ENST00000267996 RNF212Q495C1 297 aa12.56□□□□□ -0.4
TPM1-201ENST00000267996 Q6ZSV7 163 aa12.56□□□□□ -0.4
TPM1-201ENST00000267996 OCC1Q8TAD7 63 aa12.56□□□□□ -0.4
TPM1-201ENST00000267996 ISOC2Q96AB3 205 aa12.56□□□□□ -0.4
TPM1-201ENST00000267996 IGF2BP2-AS1Q96M15 143 aa12.56□□□□□ -0.4
TPM1-201ENST00000267996 YPEL4Q96NS1 127 aa12.56□□□□□ -0.4
TPM1-201ENST00000267996 GPR82Q96P67 336 aa12.56□□□□□ -0.4
TPM1-201ENST00000267996 CDC42EP3Q9UKI2 254 aa12.56□□□□□ -0.4
TPM1-201ENST00000267996 KLF12Q9Y4X4 402 aa12.56□□□□□ -0.4
TPM1-201ENST00000267996 HIVEP2P31629 2446 aa12.56□□□□□ -0.4
TPM1-201ENST00000267996 A0A087X0K7 114 aa12.55□□□□□ -0.4
TPM1-201ENST00000267996 CXorf65A6NEN9 183 aa12.55□□□□□ -0.4
TPM1-201ENST00000267996 PGPEP1LA6NFU8 196 aa12.55□□□□□ -0.4
TPM1-201ENST00000267996 COLCA2A8K830 154 aa12.55□□□□□ -0.4
TPM1-201ENST00000267996 MT-ND4LP03901 98 aa12.55□□□□□ -0.4
TPM1-201ENST00000267996 RNASE1P07998 156 aaKnown RBP12.55□□□□□ -0.4
TPM1-201ENST00000267996 CENPWQ5EE01 88 aa12.55□□□□□ -0.4
TPM1-201ENST00000267996 UNQ9165/PRO28630Q6UXU0 137 aa12.55□□□□□ -0.4
TPM1-201ENST00000267996 ATG101Q9BSB4 218 aa12.55□□□□□ -0.4
TPM1-201ENST00000267996 SLC17A3O00476 420 aa12.54□□□□□ -0.4
TPM1-201ENST00000267996 ZNF253O75346 499 aa12.54□□□□□ -0.4
TPM1-201ENST00000267996 APOHP02749 345 aaPredicted RBP12.54□□□□□ -0.4
TPM1-201ENST00000267996 SRD5A1P18405 259 aa12.54□□□□□ -0.4
TPM1-201ENST00000267996 CNN1P51911 297 aaKnown RBP12.54□□□□□ -0.4
TPM1-201ENST00000267996 GNG5P63218 68 aa12.54□□□□□ -0.4
TPM1-201ENST00000267996 EXOC3-AS1Q8N2X6 119 aa12.54□□□□□ -0.4
TPM1-201ENST00000267996 C15orf54Q8N8G6 183 aa12.54□□□□□ -0.4
TPM1-201ENST00000267996 UBE2E2Q96LR5 201 aa12.54□□□□□ -0.4
TPM1-201ENST00000267996 TCRAP04437 139 aa12.54□□□□□ -0.4
TPM1-201ENST00000267996 CD99P14209 185 aa12.54□□□□□ -0.4
TPM1-201ENST00000267996 FOSL1P15407 271 aa12.54□□□□□ -0.4
TPM1-201ENST00000267996 GNG4P50150 75 aa12.54□□□□□ -0.4
TPM1-201ENST00000267996 TMEM183BQ1AE95 376 aa12.54□□□□□ -0.4
TPM1-201ENST00000267996 GPHB5Q86YW7 130 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms