RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 FXYD7P58549 80 aa6.97□□□□□ -1.29
VPS41-201ENST00000265745 POLR2GP62487 172 aaKnown RBP eCLIP6.97□□□□□ -1.29
VPS41-201ENST00000265745 PSG9Q00887 426 aa6.97□□□□□ -1.29
VPS41-201ENST00000265745 FAM78BQ5VT40 261 aa6.97□□□□□ -1.29
VPS41-201ENST00000265745 ZNF767PQ75MW2 155 aa6.97□□□□□ -1.29
VPS41-201ENST00000265745 TMEM144Q7Z5S9 345 aa6.97□□□□□ -1.29
VPS41-201ENST00000265745 OR4B1Q8NGF8 309 aa6.97□□□□□ -1.29
VPS41-201ENST00000265745 OR4D5Q8NGN0 318 aa6.97□□□□□ -1.29
VPS41-201ENST00000265745 RSG1Q9BU20 258 aa6.97□□□□□ -1.29
VPS41-201ENST00000265745 SLC25A32Q9H2D1 315 aa6.97□□□□□ -1.29
VPS41-201ENST00000265745 FLVCR2Q9UPI3 526 aa6.97□□□□□ -1.29
VPS41-201ENST00000265745 VPS13DQ5THJ4 4388 aa6.97□□□□□ -1.29
VPS41-201ENST00000265745 A0A0J9YX75 114 aa6.96□□□□□ -1.3
VPS41-201ENST00000265745 TMEM189A5PLL7 270 aa6.96□□□□□ -1.3
VPS41-201ENST00000265745 PMS2P5A8MQ11 134 aa6.96□□□□□ -1.3
VPS41-201ENST00000265745 H3BP45 60 aa6.96□□□□□ -1.3
VPS41-201ENST00000265745 OR4E1P0C645 316 aa6.96□□□□□ -1.3
VPS41-201ENST00000265745 SPART-AS1P0CW21 52 aa6.96□□□□□ -1.3
VPS41-201ENST00000265745 GALR1P47211 349 aa6.96□□□□□ -1.3
VPS41-201ENST00000265745 MEOX2P50222 304 aa6.96□□□□□ -1.3
VPS41-201ENST00000265745 EBLN2Q6P2I7 272 aa6.96□□□□□ -1.3
VPS41-201ENST00000265745 ACOT7LQ6ZUV0 252 aa6.96□□□□□ -1.3
VPS41-201ENST00000265745 BPIFCQ8NFQ6 507 aa6.96□□□□□ -1.3
VPS41-201ENST00000265745 C20orf173Q96LM9 149 aa6.96□□□□□ -1.3
VPS41-201ENST00000265745 SDHCQ99643 169 aaPredicted RBP6.96□□□□□ -1.3
VPS41-201ENST00000265745 C1orf43Q9BWL3 253 aa6.96□□□□□ -1.3
VPS41-201ENST00000265745 SCRT1Q9BWW7 348 aa6.96□□□□□ -1.3
VPS41-201ENST00000265745 SLC35B3Q9H1N7 401 aa6.96□□□□□ -1.3
VPS41-201ENST00000265745 SLC25A22Q9H936 323 aa6.96□□□□□ -1.3
VPS41-201ENST00000265745 IGHV3OR16-12A0A075B7B8 117 aa6.95□□□□□ -1.3
VPS41-201ENST00000265745 LINC00854A0A1B0GVQ3 168 aa6.95□□□□□ -1.3
VPS41-201ENST00000265745 IFNA21P01568 189 aa6.95□□□□□ -1.3
VPS41-201ENST00000265745 AMBPP02760 352 aa6.95□□□□□ -1.3
VPS41-201ENST00000265745 BTCP35070 178 aa6.95□□□□□ -1.3
VPS41-201ENST00000265745 INPP1P49441 399 aa6.95□□□□□ -1.3
VPS41-201ENST00000265745 EMP1P54849 157 aa6.95□□□□□ -1.3
VPS41-201ENST00000265745 AKR1C1Q04828 323 aa6.95□□□□□ -1.3
VPS41-201ENST00000265745 TRIQKQ629K1 86 aa6.95□□□□□ -1.3
VPS41-201ENST00000265745 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.95□□□□□ -1.3
VPS41-201ENST00000265745 C1orf158Q8N1D5 194 aa6.95□□□□□ -1.3
VPS41-201ENST00000265745 OR1B1Q8NGR6 318 aa6.95□□□□□ -1.3
VPS41-201ENST00000265745 SMIM8Q96KF7 97 aa6.95□□□□□ -1.3
VPS41-201ENST00000265745 GPR82Q96P67 336 aa6.95□□□□□ -1.3
VPS41-201ENST00000265745 TMEM147Q9BVK8 224 aa6.95□□□□□ -1.3
VPS41-201ENST00000265745 RPRMQ9NS64 109 aa6.95□□□□□ -1.3
VPS41-201ENST00000265745 PSENENQ9NZ42 101 aa6.95□□□□□ -1.3
VPS41-201ENST00000265745 DOK5Q9P104 306 aa6.95□□□□□ -1.3
VPS41-201ENST00000265745 RFNGQ9Y644 331 aa6.95□□□□□ -1.3
VPS41-201ENST00000265745 FRAS1Q86XX4 4008 aa6.95□□□□□ -1.3
VPS41-201ENST00000265745 DNAH10Q8IVF4 4471 aa6.95□□□□□ -1.3
VPS41-201ENST00000265745 TRAV8-2A0A0B4J237 113 aa6.94□□□□□ -1.3
VPS41-201ENST00000265745 A8MTW9 85 aa6.94□□□□□ -1.3
VPS41-201ENST00000265745 IL5P05113 134 aa6.94□□□□□ -1.3
VPS41-201ENST00000265745 ANXA7P20073 488 aaKnown RBP6.94□□□□□ -1.3
VPS41-201ENST00000265745 S100A7P31151 101 aa6.94□□□□□ -1.3
VPS41-201ENST00000265745 PLP1P60201 277 aa6.94□□□□□ -1.3
VPS41-201ENST00000265745 AMTNQ6UX39 209 aa6.94□□□□□ -1.3
VPS41-201ENST00000265745 CYP2G1PQ6ZSU1 146 aa6.94□□□□□ -1.3
VPS41-201ENST00000265745 NUDT10Q8NFP7 164 aa6.94□□□□□ -1.3
VPS41-201ENST00000265745 NUDT11Q96G61 164 aa6.94□□□□□ -1.3
VPS41-201ENST00000265745 SHANK2-AS3Q9BTD1 123 aa6.94□□□□□ -1.3
VPS41-201ENST00000265745 NDUFAF3Q9BU61 184 aa6.94□□□□□ -1.3
VPS41-201ENST00000265745 SLC25A39Q9BZJ4 359 aaPredicted RBP6.94□□□□□ -1.3
VPS41-201ENST00000265745 DKK2Q9UBU2 259 aa6.94□□□□□ -1.3
VPS41-201ENST00000265745 GOLT1BQ9Y3E0 138 aa6.94□□□□□ -1.3
VPS41-201ENST00000265745 SMCO3A2RU48 225 aa6.93□□□□□ -1.3
VPS41-201ENST00000265745 CENPXA8MT69 81 aa6.93□□□□□ -1.3
VPS41-201ENST00000265745 FNDC10F2Z333 226 aa6.93□□□□□ -1.3
VPS41-201ENST00000265745 H3BRN7 92 aa6.93□□□□□ -1.3
VPS41-201ENST00000265745 SSSCA1O60232 199 aa6.93□□□□□ -1.3
VPS41-201ENST00000265745 HYPMO75409 117 aa6.93□□□□□ -1.3
VPS41-201ENST00000265745 CCNKO75909 580 aa6.93□□□□□ -1.3
VPS41-201ENST00000265745 GYPEP15421 78 aa6.93□□□□□ -1.3
VPS41-201ENST00000265745 SELENOTP62341 195 aa6.93□□□□□ -1.3
VPS41-201ENST00000265745 DLK1P80370 383 aa6.93□□□□□ -1.3
VPS41-201ENST00000265745 FAM222AQ5U5X8 452 aa6.93□□□□□ -1.3
VPS41-201ENST00000265745 IGFL4Q6B9Z1 124 aa6.93□□□□□ -1.3
VPS41-201ENST00000265745 TMEM14EPQ6UXP3 125 aa6.93□□□□□ -1.3
VPS41-201ENST00000265745 POM121L12Q8N7R1 296 aa6.93□□□□□ -1.3
VPS41-201ENST00000265745 MITD1Q8WV92 249 aa6.93□□□□□ -1.3
VPS41-201ENST00000265745 C7orf50Q9BRJ6 194 aaKnown RBP6.93□□□□□ -1.3
VPS41-201ENST00000265745 HIGD1AQ9Y241 93 aa6.93□□□□□ -1.3
VPS41-201ENST00000265745 TEX48A0A1B0GUV7 120 aa6.92□□□□□ -1.3
VPS41-201ENST00000265745 K7EPK0 472 aa6.92□□□□□ -1.3
VPS41-201ENST00000265745 PLA2G10O15496 165 aa6.92□□□□□ -1.3
VPS41-201ENST00000265745 HBE1P02100 147 aa6.92□□□□□ -1.3
VPS41-201ENST00000265745 METTL15P1P0C7V9 234 aa6.92□□□□□ -1.3
VPS41-201ENST00000265745 LINC00869P0C866 280 aa6.92□□□□□ -1.3
VPS41-201ENST00000265745 P0DMU3 169 aa6.92□□□□□ -1.3
VPS41-201ENST00000265745 FAM231AP0DMU4 169 aa6.92□□□□□ -1.3
VPS41-201ENST00000265745 FAM231CP0DMU5 169 aa6.92□□□□□ -1.3
VPS41-201ENST00000265745 IL7P13232 177 aa6.92□□□□□ -1.3
VPS41-201ENST00000265745 RPL7P18124 248 aaKnown RBP6.92□□□□□ -1.3
VPS41-201ENST00000265745 CNN1P51911 297 aaKnown RBP6.92□□□□□ -1.3
VPS41-201ENST00000265745 TAS2R30P59541 319 aa6.92□□□□□ -1.3
VPS41-201ENST00000265745 RAP2BP61225 183 aa6.92□□□□□ -1.3
VPS41-201ENST00000265745 RRAS2P62070 204 aaPredicted RBP6.92□□□□□ -1.3
VPS41-201ENST00000265745 OXA1LQ15070 435 aa6.92□□□□□ -1.3
VPS41-201ENST00000265745 RRN3P1Q2M238 152 aa6.92□□□□□ -1.3
VPS41-201ENST00000265745 IAH1Q2TAA2 248 aaPredicted RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms