RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 PRR7Q8TB68 274 aa12.28□□□□□ -0.44
CASC3-201ENST00000264645 ATP6V0BQ99437 205 aa12.28□□□□□ -0.44
CASC3-201ENST00000264645 FGF23Q9GZV9 251 aaPredicted RBP12.28□□□□□ -0.44
CASC3-201ENST00000264645 TP73-AS1Q9UF72 201 aa12.28□□□□□ -0.44
CASC3-201ENST00000264645 TEX48A0A1B0GUV7 120 aa12.27□□□□□ -0.44
CASC3-201ENST00000264645 DGAT2L7PQ6IED9 249 aa12.27□□□□□ -0.44
CASC3-201ENST00000264645 AMTNQ6UX39 209 aa12.27□□□□□ -0.44
CASC3-201ENST00000264645 C16orf92Q96LL3 132 aa12.27□□□□□ -0.44
CASC3-201ENST00000264645 ZNRD1Q9P1U0 126 aa12.27□□□□□ -0.44
CASC3-201ENST00000264645 TM4SF5O14894 197 aa12.27□□□□□ -0.45
CASC3-201ENST00000264645 TOMM40O96008 361 aa12.27□□□□□ -0.45
CASC3-201ENST00000264645 KLF17Q5JT82 389 aaPredicted RBP12.27□□□□□ -0.45
CASC3-201ENST00000264645 FAM231DQ6ZW35 169 aa12.27□□□□□ -0.45
CASC3-201ENST00000264645 Q8NFD4 153 aa12.27□□□□□ -0.45
CASC3-201ENST00000264645 A8MWV9 139 aa12.27□□□□□ -0.45
CASC3-201ENST00000264645 PRTN3P24158 256 aa12.27□□□□□ -0.45
CASC3-201ENST00000264645 RPUSD1Q9UJJ7 312 aaKnown RBP12.27□□□□□ -0.45
CASC3-201ENST00000264645 ZNF815PA8K554 130 aa12.26□□□□□ -0.45
CASC3-201ENST00000264645 CD300EQ496F6 205 aaPredicted RBP12.26□□□□□ -0.45
CASC3-201ENST00000264645 FABP5P3A8MUU1 101 aa12.26□□□□□ -0.45
CASC3-201ENST00000264645 H3BMG7 143 aa12.26□□□□□ -0.45
CASC3-201ENST00000264645 K7ERJ3 54 aa12.26□□□□□ -0.45
CASC3-201ENST00000264645 PPBPP02775 128 aa12.26□□□□□ -0.45
CASC3-201ENST00000264645 LTBRP36941 435 aa12.26□□□□□ -0.45
CASC3-201ENST00000264645 GAGE2BQ13066 116 aa12.26□□□□□ -0.45
CASC3-201ENST00000264645 GAGE2EQ4V326 116 aa12.26□□□□□ -0.45
CASC3-201ENST00000264645 Q6ZPA2 131 aa12.26□□□□□ -0.45
CASC3-201ENST00000264645 GAGE2DQ9UEU5 116 aa12.26□□□□□ -0.45
CASC3-201ENST00000264645 MALRD1Q5VYJ5 2156 aa12.26□□□□□ -0.45
CASC3-201ENST00000264645 RNF125Q96EQ8 232 aa12.26□□□□□ -0.45
CASC3-201ENST00000264645 C16orf97H3BN30 126 aa12.26□□□□□ -0.45
CASC3-201ENST00000264645 NKX2-8O15522 239 aa12.26□□□□□ -0.45
CASC3-201ENST00000264645 PRR20EP86478 221 aa12.26□□□□□ -0.45
CASC3-201ENST00000264645 PRR20CP86479 221 aa12.26□□□□□ -0.45
CASC3-201ENST00000264645 PRR20DP86480 221 aa12.26□□□□□ -0.45
CASC3-201ENST00000264645 PRR20BP86481 221 aa12.26□□□□□ -0.45
CASC3-201ENST00000264645 PRR20AP86496 221 aa12.26□□□□□ -0.45
CASC3-201ENST00000264645 ZFAND6Q6FIF0 208 aa12.26□□□□□ -0.45
CASC3-201ENST00000264645 GFRALQ6UXV0 394 aa12.26□□□□□ -0.45
CASC3-201ENST00000264645 RAB1BQ9H0U4 201 aa12.26□□□□□ -0.45
CASC3-201ENST00000264645 LINC00312Q9Y6C7 94 aa12.26□□□□□ -0.45
CASC3-201ENST00000264645 TMEM213A2RRL7 107 aa12.25□□□□□ -0.45
CASC3-201ENST00000264645 FAM90A1Q86YD7 464 aa12.25□□□□□ -0.45
CASC3-201ENST00000264645 UBALD2Q8IYN6 164 aa12.25□□□□□ -0.45
CASC3-201ENST00000264645 PGPEP1Q9NXJ5 209 aa12.25□□□□□ -0.45
CASC3-201ENST00000264645 IGKV1D-17A0A075B6S4 117 aa12.25□□□□□ -0.45
CASC3-201ENST00000264645 SP9P0CG40 484 aa12.25□□□□□ -0.45
CASC3-201ENST00000264645 TMEM14BQ9NUH8 114 aa12.25□□□□□ -0.45
CASC3-201ENST00000264645 ZNF295-AS1Q8N0V1 137 aa12.25□□□□□ -0.45
CASC3-201ENST00000264645 SLC25A39Q9BZJ4 359 aaPredicted RBP12.25□□□□□ -0.45
CASC3-201ENST00000264645 PROK2Q9HC23 129 aa12.25□□□□□ -0.45
CASC3-201ENST00000264645 H0YJW9 148 aa12.24□□□□□ -0.45
CASC3-201ENST00000264645 TP53TG3Q9ULZ0 132 aa12.24□□□□□ -0.45
CASC3-201ENST00000264645 Q86TA4 180 aa12.24□□□□□ -0.45
CASC3-201ENST00000264645 C1RLQ9NZP8 487 aa12.24□□□□□ -0.45
CASC3-201ENST00000264645 IGKV2-40A0A087WW87 121 aaPredicted RBP12.24□□□□□ -0.45
CASC3-201ENST00000264645 IGKV2D-40P01614 121 aaPredicted RBP12.24□□□□□ -0.45
CASC3-201ENST00000264645 IGLC1P0CG04 106 aa12.24□□□□□ -0.45
CASC3-201ENST00000264645 FAM74A4Q5TZK3 123 aa12.24□□□□□ -0.45
CASC3-201ENST00000264645 CRIP3Q6Q6R5 217 aa12.24□□□□□ -0.45
CASC3-201ENST00000264645 TMEM158Q8WZ71 300 aa12.24□□□□□ -0.45
CASC3-201ENST00000264645 ARPC1AQ92747 370 aa12.24□□□□□ -0.45
CASC3-201ENST00000264645 AHRRA9YTQ3 701 aa12.23□□□□□ -0.45
CASC3-201ENST00000264645 FNDC10F2Z333 226 aa12.23□□□□□ -0.45
CASC3-201ENST00000264645 PPP1R27Q86WC6 154 aa12.23□□□□□ -0.45
CASC3-201ENST00000264645 Q8TAT8 98 aa12.23□□□□□ -0.45
CASC3-201ENST00000264645 SLC25A2Q9BXI2 301 aa12.23□□□□□ -0.45
CASC3-201ENST00000264645 COL6A6A6NMZ7 2263 aa12.23□□□□□ -0.45
CASC3-201ENST00000264645 THADAQ6YHU6 1953 aa12.23□□□□□ -0.45
CASC3-201ENST00000264645 TMEM262E9PQX1 116 aa12.23□□□□□ -0.45
CASC3-201ENST00000264645 VCX2Q9H322 139 aa12.23□□□□□ -0.45
CASC3-201ENST00000264645 PCP2Q8IVA1 136 aa12.23□□□□□ -0.45
CASC3-201ENST00000264645 DLX4Q92988 240 aaPredicted RBP12.23□□□□□ -0.45
CASC3-201ENST00000264645 TRAV40A0A0B4J280 105 aa12.22□□□□□ -0.45
CASC3-201ENST00000264645 RHOGP84095 191 aa12.22□□□□□ -0.45
CASC3-201ENST00000264645 Q0VFX4 171 aa12.22□□□□□ -0.45
CASC3-201ENST00000264645 ZNF747Q9BV97 191 aa12.22□□□□□ -0.45
CASC3-201ENST00000264645 ANKRD39Q53RE8 183 aa12.22□□□□□ -0.45
CASC3-201ENST00000264645 C9orf106Q8NAJ2 232 aa12.22□□□□□ -0.45
CASC3-201ENST00000264645 KIR2DL4Q99706 377 aa12.22□□□□□ -0.45
CASC3-201ENST00000264645 VGLL1Q99990 258 aa12.22□□□□□ -0.45
CASC3-201ENST00000264645 PSMB11A5LHX3 300 aa12.22□□□□□ -0.45
CASC3-201ENST00000264645 TSPAN13O95857 204 aa12.22□□□□□ -0.45
CASC3-201ENST00000264645 SMPXQ9UHP9 88 aa12.22□□□□□ -0.45
CASC3-201ENST00000264645 OBSL1O75147 1896 aa12.22□□□□□ -0.45
CASC3-201ENST00000264645 PCNX2A6NKB5 2137 aa12.22□□□□□ -0.45
CASC3-201ENST00000264645 THSD7BQ9C0I4 1608 aa12.22□□□□□ -0.45
CASC3-201ENST00000264645 ZNF134P52741 427 aa12.22□□□□□ -0.45
CASC3-201ENST00000264645 SYT8Q8NBV8 401 aa12.22□□□□□ -0.45
CASC3-201ENST00000264645 DEFB104AQ8WTQ1 72 aa12.22□□□□□ -0.45
CASC3-201ENST00000264645 GFRA4Q9GZZ7 299 aa12.22□□□□□ -0.45
CASC3-201ENST00000264645 C21orf62Q9NYP8 219 aa12.22□□□□□ -0.45
CASC3-201ENST00000264645 COL4A4P53420 1690 aaPredicted RBP12.21□□□□□ -0.45
CASC3-201ENST00000264645 SRSF1Q07955 248 aaKnown RBP eCLIP12.21□□□□□ -0.454e-6■■■■□ 20.2
CASC3-201ENST00000264645 KLF5Q13887 457 aaPredicted RBP12.21□□□□□ -0.45
CASC3-201ENST00000264645 SH2D6Q7Z4S9 175 aa12.21□□□□□ -0.45
CASC3-201ENST00000264645 C1orf210Q8IVY1 113 aa12.21□□□□□ -0.45
CASC3-201ENST00000264645 OR10J6PQ8NGY7 276 aa12.21□□□□□ -0.45
CASC3-201ENST00000264645 FAM27E3Q08E93 113 aa12.21□□□□□ -0.45
CASC3-201ENST00000264645 Q6ZSR3 168 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms