RNA–Protein interactions for RNA: ENST00000263956.7

GTF3C3-201, Transcript of general transcription factor IIIC subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C3, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-201ENST00000263956 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.49□□□□□ -1.37
GTF3C3-201ENST00000263956 C8orf86Q6ZUL3 223 aa6.49□□□□□ -1.37
GTF3C3-201ENST00000263956 ZNF502Q8TBZ5 544 aa6.49□□□□□ -1.37
GTF3C3-201ENST00000263956 RARRES2Q99969 163 aa6.49□□□□□ -1.37
GTF3C3-201ENST00000263956 SEC11CQ9BY50 192 aa6.49□□□□□ -1.37
GTF3C3-201ENST00000263956 AURKAIP1Q9NWT8 199 aaPredicted RBP6.49□□□□□ -1.37
GTF3C3-201ENST00000263956 JMJD1CQ15652 2540 aa6.48□□□□□ -1.37
GTF3C3-201ENST00000263956 B4DEV8 164 aa6.48□□□□□ -1.37
GTF3C3-201ENST00000263956 I3L2K1 104 aa6.48□□□□□ -1.37
GTF3C3-201ENST00000263956 IGF1P05019 195 aa6.48□□□□□ -1.37
GTF3C3-201ENST00000263956 RNASE1P07998 156 aaKnown RBP6.48□□□□□ -1.37
GTF3C3-201ENST00000263956 ZNF688P0C7X2 276 aa6.48□□□□□ -1.37
GTF3C3-201ENST00000263956 HOXD3P31249 432 aaPredicted RBP6.48□□□□□ -1.37
GTF3C3-201ENST00000263956 LCN12Q6JVE5 192 aa6.48□□□□□ -1.37
GTF3C3-201ENST00000263956 HAPLN4Q86UW8 402 aa6.48□□□□□ -1.37
GTF3C3-201ENST00000263956 ANAPC16Q96DE5 110 aa6.48□□□□□ -1.37
GTF3C3-201ENST00000263956 TCEAL7Q9BRU2 100 aa6.48□□□□□ -1.37
GTF3C3-201ENST00000263956 F5H697 171 aa6.48□□□□□ -1.37
GTF3C3-201ENST00000263956 P0C879 139 aa6.48□□□□□ -1.37
GTF3C3-201ENST00000263956 A8MWL6 223 aa6.48□□□□□ -1.37
GTF3C3-201ENST00000263956 OR11H12B2RN74 326 aa6.48□□□□□ -1.37
GTF3C3-201ENST00000263956 Q6ZSV7 163 aa6.48□□□□□ -1.37
GTF3C3-201ENST00000263956 ATP6V0BQ99437 205 aa6.48□□□□□ -1.37
GTF3C3-201ENST00000263956 KLK15Q9H2R5 256 aa6.48□□□□□ -1.37
GTF3C3-201ENST00000263956 NRN1Q9NPD7 142 aa6.48□□□□□ -1.37
GTF3C3-201ENST00000263956 EPDR1Q9UM22 224 aa6.48□□□□□ -1.37
GTF3C3-201ENST00000263956 E7EUB6 86 aa6.47□□□□□ -1.37
GTF3C3-201ENST00000263956 CRLF1O75462 422 aa6.47□□□□□ -1.37
GTF3C3-201ENST00000263956 CRYGBP07316 175 aa6.47□□□□□ -1.37
GTF3C3-201ENST00000263956 ATP5G3P48201 142 aa6.47□□□□□ -1.37
GTF3C3-201ENST00000263956 FAM159AQ6UWV7 190 aa6.47□□□□□ -1.37
GTF3C3-201ENST00000263956 Q8N6K4 173 aa6.47□□□□□ -1.37
GTF3C3-201ENST00000263956 ATG101Q9BSB4 218 aa6.47□□□□□ -1.37
GTF3C3-201ENST00000263956 TMEM160Q9NX00 188 aa6.47□□□□□ -1.37
GTF3C3-201ENST00000263956 MYO9AB2RTY4 2548 aa6.47□□□□□ -1.37
GTF3C3-201ENST00000263956 TRAV34A0A0B4J273 112 aa6.47□□□□□ -1.37
GTF3C3-201ENST00000263956 IGHG4P01861 327 aa6.47□□□□□ -1.37
GTF3C3-201ENST00000263956 RPS20P60866 119 aaKnown RBP6.47□□□□□ -1.37
GTF3C3-201ENST00000263956 IFITM2Q01629 132 aa6.47□□□□□ -1.37
GTF3C3-201ENST00000263956 RRN3P1Q2M238 152 aa6.47□□□□□ -1.37
GTF3C3-201ENST00000263956 DEFB136Q30KP8 78 aa6.47□□□□□ -1.37
GTF3C3-201ENST00000263956 DUX3Q96PT4 197 aa6.47□□□□□ -1.37
GTF3C3-201ENST00000263956 PARLQ9H300 379 aa6.47□□□□□ -1.37
GTF3C3-201ENST00000263956 LINC01548A6NM66 108 aa6.47□□□□□ -1.37
GTF3C3-201ENST00000263956 RIGQ13278 110 aa6.47□□□□□ -1.37
GTF3C3-201ENST00000263956 FMC1Q96HJ9 113 aa6.47□□□□□ -1.37
GTF3C3-201ENST00000263956 RFNGQ9Y644 331 aa6.47□□□□□ -1.37
GTF3C3-201ENST00000263956 MGAQ8IWI9 3026 aa6.47□□□□□ -1.37
GTF3C3-201ENST00000263956 TRAV1-1A0A0B4J248 108 aa6.47□□□□□ -1.37
GTF3C3-201ENST00000263956 IGHV7-4-1A0A0J9YVY3 117 aa6.47□□□□□ -1.37
GTF3C3-201ENST00000263956 MYCNOSP40205 109 aa6.47□□□□□ -1.37
GTF3C3-201ENST00000263956 LEPP41159 167 aa6.47□□□□□ -1.37
GTF3C3-201ENST00000263956 TAS2R60P59551 318 aa6.47□□□□□ -1.37
GTF3C3-201ENST00000263956 SPANXN1Q5VSR9 72 aa6.47□□□□□ -1.37
GTF3C3-201ENST00000263956 LYPD1Q8N2G4 141 aa6.47□□□□□ -1.37
GTF3C3-201ENST00000263956 RAI1Q7Z5J4 1906 aaPredicted RBP6.47□□□□□ -1.37
GTF3C3-201ENST00000263956 ANKRD17O75179 2603 aaKnown RBP6.47□□□□□ -1.37
GTF3C3-201ENST00000263956 FCN3O75636 299 aa6.46□□□□□ -1.37
GTF3C3-201ENST00000263956 TCL1AP56279 114 aa6.46□□□□□ -1.37
GTF3C3-201ENST00000263956 CENPWQ5EE01 88 aa6.46□□□□□ -1.37
GTF3C3-201ENST00000263956 ZNF491Q8N8L2 437 aa6.46□□□□□ -1.37
GTF3C3-201ENST00000263956 GLMPQ8WWB7 406 aa6.46□□□□□ -1.37
GTF3C3-201ENST00000263956 CITED2Q99967 270 aaPredicted RBP6.46□□□□□ -1.37
GTF3C3-201ENST00000263956 SCO2A0A1W2PP80 73 aa6.46□□□□□ -1.38
GTF3C3-201ENST00000263956 SPINK4O60575 86 aa6.46□□□□□ -1.38
GTF3C3-201ENST00000263956 CDX1P47902 265 aaPredicted RBP6.46□□□□□ -1.38
GTF3C3-201ENST00000263956 FABP9Q0Z7S8 132 aa6.46□□□□□ -1.38
GTF3C3-201ENST00000263956 IBA57Q5T440 356 aaKnown RBP6.46□□□□□ -1.38
GTF3C3-201ENST00000263956 CLRN3Q8NCR9 226 aa6.46□□□□□ -1.38
GTF3C3-201ENST00000263956 FANCD2OSQ96PS1 177 aa6.46□□□□□ -1.38
GTF3C3-201ENST00000263956 SMPXQ9UHP9 88 aa6.46□□□□□ -1.38
GTF3C3-201ENST00000263956 RPL35P42766 123 aaKnown RBP6.46□□□□□ -1.38
GTF3C3-201ENST00000263956 PDE6HQ13956 83 aa6.46□□□□□ -1.38
GTF3C3-201ENST00000263956 AWAT1Q58HT5 328 aa6.46□□□□□ -1.38
GTF3C3-201ENST00000263956 NHLRC2Q8NBF2 726 aa6.46□□□□□ -1.38
GTF3C3-201ENST00000263956 WDFY4Q6ZS81 3184 aa6.45□□□□□ -1.38
GTF3C3-201ENST00000263956 FAM74A7A6NL05 159 aa6.45□□□□□ -1.38
GTF3C3-201ENST00000263956 G3V3Q6 166 aa6.45□□□□□ -1.38
GTF3C3-201ENST00000263956 CTSGP08311 255 aa6.45□□□□□ -1.38
GTF3C3-201ENST00000263956 FOLR2P14207 255 aa6.45□□□□□ -1.38
GTF3C3-201ENST00000263956 GNG5P63218 68 aa6.45□□□□□ -1.38
GTF3C3-201ENST00000263956 SYT8Q8NBV8 401 aa6.45□□□□□ -1.38
GTF3C3-201ENST00000263956 NOTCH3Q9UM47 2321 aa6.45□□□□□ -1.38
GTF3C3-201ENST00000263956 IGKV1-17P01599 117 aa6.45□□□□□ -1.38
GTF3C3-201ENST00000263956 MDKP21741 143 aaPredicted RBP6.45□□□□□ -1.38
GTF3C3-201ENST00000263956 SLURP1P55000 103 aa6.45□□□□□ -1.38
GTF3C3-201ENST00000263956 EXOC3-AS1Q8N2X6 119 aa6.45□□□□□ -1.38
GTF3C3-201ENST00000263956 LINC01587Q99440 93 aa6.45□□□□□ -1.38
GTF3C3-201ENST00000263956 PSG8Q9UQ74 426 aa6.45□□□□□ -1.38
GTF3C3-201ENST00000263956 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.45□□□□□ -1.38
GTF3C3-201ENST00000263956 H3BRN7 92 aa6.45□□□□□ -1.38
GTF3C3-201ENST00000263956 CAMPP49913 170 aa6.45□□□□□ -1.38
GTF3C3-201ENST00000263956 DEFB131AP59861 70 aa6.45□□□□□ -1.38
GTF3C3-201ENST00000263956 C4orf3Q8WVX3 66 aa6.45□□□□□ -1.38
GTF3C3-201ENST00000263956 C7orf77A4D0Y5 90 aa6.45□□□□□ -1.38
GTF3C3-201ENST00000263956 PRR20EP86478 221 aa6.45□□□□□ -1.38
GTF3C3-201ENST00000263956 PRR20CP86479 221 aa6.45□□□□□ -1.38
GTF3C3-201ENST00000263956 PRR20DP86480 221 aa6.45□□□□□ -1.38
GTF3C3-201ENST00000263956 PRR20BP86481 221 aa6.45□□□□□ -1.38
GTF3C3-201ENST00000263956 PRR20AP86496 221 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 182.9 ms