RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 MEF2CQ06413 473 aaPredicted RBP9.89□□□□□ -0.83
CHMP3-201ENST00000263856 IGFL2Q6UWQ7 119 aa9.89□□□□□ -0.83
CHMP3-201ENST00000263856 ATP5L2Q7Z4Y8 100 aa9.89□□□□□ -0.83
CHMP3-201ENST00000263856 FMC1Q96HJ9 113 aa9.89□□□□□ -0.83
CHMP3-201ENST00000263856 NCOR1P1Q9H4R4 102 aa9.89□□□□□ -0.83
CHMP3-201ENST00000263856 IGHV3OR16-8A0A075B7F1 116 aa9.89□□□□□ -0.83
CHMP3-201ENST00000263856 KLK10O43240 276 aa9.89□□□□□ -0.83
CHMP3-201ENST00000263856 FSTL3O95633 263 aa9.89□□□□□ -0.83
CHMP3-201ENST00000263856 KLF17Q5JT82 389 aaPredicted RBP9.89□□□□□ -0.83
CHMP3-201ENST00000263856 WFDC3Q8IUB2 231 aa9.89□□□□□ -0.83
CHMP3-201ENST00000263856 THAP8Q8NA92 274 aa9.89□□□□□ -0.83
CHMP3-201ENST00000263856 NAA38Q9BRA0 125 aaKnown RBP9.89□□□□□ -0.83
CHMP3-201ENST00000263856 PPP1R14DQ9NXH3 145 aa9.89□□□□□ -0.83
CHMP3-201ENST00000263856 TOMM40O96008 361 aa9.89□□□□□ -0.83
CHMP3-201ENST00000263856 GP9P14770 177 aa9.89□□□□□ -0.83
CHMP3-201ENST00000263856 LOXP28300 417 aaPredicted RBP9.89□□□□□ -0.83
CHMP3-201ENST00000263856 Q86TA4 180 aa9.89□□□□□ -0.83
CHMP3-201ENST00000263856 MUC15Q8N387 334 aa9.89□□□□□ -0.83
CHMP3-201ENST00000263856 IGHV1-8P0DP01 117 aa9.88□□□□□ -0.83
CHMP3-201ENST00000263856 FA2HQ7L5A8 372 aa9.88□□□□□ -0.83
CHMP3-201ENST00000263856 PRSS33Q8NF86 280 aa9.88□□□□□ -0.83
CHMP3-201ENST00000263856 OR5AL1P0C617 328 aa9.88□□□□□ -0.83
CHMP3-201ENST00000263856 FAM120AOSQ5T036 256 aa9.88□□□□□ -0.83
CHMP3-201ENST00000263856 SLC25A39Q9BZJ4 359 aaPredicted RBP9.88□□□□□ -0.83
CHMP3-201ENST00000263856 IGHV3-35A0A0C4DH35 117 aa9.87□□□□□ -0.83
CHMP3-201ENST00000263856 LTAP01374 205 aa9.87□□□□□ -0.83
CHMP3-201ENST00000263856 IGHV3-23P01764 117 aa9.87□□□□□ -0.83
CHMP3-201ENST00000263856 MYCNOSP40205 109 aa9.87□□□□□ -0.83
CHMP3-201ENST00000263856 ARF6P62330 175 aa9.87□□□□□ -0.83
CHMP3-201ENST00000263856 AMMECR1LQ6DCA0 310 aa9.87□□□□□ -0.83
CHMP3-201ENST00000263856 C8orf46Q8TAG6 207 aa9.87□□□□□ -0.83
CHMP3-201ENST00000263856 RPEQ96AT9 228 aa9.87□□□□□ -0.83
CHMP3-201ENST00000263856 VPS25Q9BRG1 176 aa9.87□□□□□ -0.83
CHMP3-201ENST00000263856 HILPDAQ9Y5L2 63 aa9.87□□□□□ -0.83
CHMP3-201ENST00000263856 A0A0G2JNJ9 132 aa9.87□□□□□ -0.83
CHMP3-201ENST00000263856 LIPFP07098 398 aa9.87□□□□□ -0.83
CHMP3-201ENST00000263856 FCGR2BP31994 310 aaPredicted RBP9.87□□□□□ -0.83
CHMP3-201ENST00000263856 MC5RP33032 325 aa9.87□□□□□ -0.83
CHMP3-201ENST00000263856 HES1Q14469 280 aa9.87□□□□□ -0.83
CHMP3-201ENST00000263856 OR4A5Q8NH83 315 aa9.87□□□□□ -0.83
CHMP3-201ENST00000263856 MLST8Q9BVC4 326 aa9.87□□□□□ -0.83
CHMP3-201ENST00000263856 Q9UFV3 132 aa9.87□□□□□ -0.83
CHMP3-201ENST00000263856 LDLRAD2Q5SZI1 272 aa9.87□□□□□ -0.83
CHMP3-201ENST00000263856 PPP1R27Q86WC6 154 aa9.87□□□□□ -0.83
CHMP3-201ENST00000263856 TMEM133Q9H2Q1 129 aa9.87□□□□□ -0.83
CHMP3-201ENST00000263856 LINC00574Q9H8X3 128 aa9.87□□□□□ -0.83
CHMP3-201ENST00000263856 AP5S1Q9NUS5 200 aa9.87□□□□□ -0.83
CHMP3-201ENST00000263856 LOC105371242A0A075B767 164 aa9.86□□□□□ -0.83
CHMP3-201ENST00000263856 PRRG2O14669 202 aa9.86□□□□□ -0.83
CHMP3-201ENST00000263856 IL4P05112 153 aa9.86□□□□□ -0.83
CHMP3-201ENST00000263856 TMEM30BQ3MIR4 351 aa9.86□□□□□ -0.83
CHMP3-201ENST00000263856 FAM162BQ5T6X4 162 aa9.86□□□□□ -0.83
CHMP3-201ENST00000263856 TRGV9Q99603 122 aa9.86□□□□□ -0.83
CHMP3-201ENST00000263856 ONECUT1Q9UBC0 465 aa9.86□□□□□ -0.83
CHMP3-201ENST00000263856 SIGLEC9Q9Y336 463 aa9.86□□□□□ -0.83
CHMP3-201ENST00000263856 A0A1B0GUT8 65 aa9.86□□□□□ -0.83
CHMP3-201ENST00000263856 FAM106CPP0CH98 169 aa9.86□□□□□ -0.83
CHMP3-201ENST00000263856 S100A7P31151 101 aa9.86□□□□□ -0.83
CHMP3-201ENST00000263856 NHLH1Q02575 133 aa9.86□□□□□ -0.83
CHMP3-201ENST00000263856 FAM106AQ4KMX7 169 aa9.86□□□□□ -0.83
CHMP3-201ENST00000263856 C19orf71A6NCJ1 209 aa9.85□□□□□ -0.83
CHMP3-201ENST00000263856 LGALS7P47929 136 aa9.85□□□□□ -0.83
CHMP3-201ENST00000263856 FOXE3Q13461 319 aa9.85□□□□□ -0.83
CHMP3-201ENST00000263856 IGFL4Q6B9Z1 124 aa9.85□□□□□ -0.83
CHMP3-201ENST00000263856 ST20Q9HBF5 79 aa9.85□□□□□ -0.83
CHMP3-201ENST00000263856 LY6HO94772 140 aa9.85□□□□□ -0.83
CHMP3-201ENST00000263856 NCR2O95944 276 aa9.85□□□□□ -0.83
CHMP3-201ENST00000263856 HLA-DRB1P01911 266 aa9.85□□□□□ -0.83
CHMP3-201ENST00000263856 CHCHD1Q96BP2 118 aaKnown RBP9.85□□□□□ -0.83
CHMP3-201ENST00000263856 C8orf49Q96NF6 230 aa9.85□□□□□ -0.83
CHMP3-201ENST00000263856 BVES-AS1Q5T3Y7 98 aa9.85□□□□□ -0.83
CHMP3-201ENST00000263856 RNASE6Q93091 150 aaKnown RBP9.85□□□□□ -0.83
CHMP3-201ENST00000263856 PRSS22Q9GZN4 317 aa9.85□□□□□ -0.83
CHMP3-201ENST00000263856 HSPB8Q9UJY1 196 aa9.85□□□□□ -0.83
CHMP3-201ENST00000263856 KLF12Q9Y4X4 402 aa9.85□□□□□ -0.83
CHMP3-201ENST00000263856 TLN1Q9Y490 2541 aaKnown RBP9.84□□□□□ -0.83
CHMP3-201ENST00000263856 IGHV1-3A0A0C4DH29 117 aa9.84□□□□□ -0.83
CHMP3-201ENST00000263856 CT45A10P0DMU9 189 aa9.84□□□□□ -0.83
CHMP3-201ENST00000263856 IFI27P40305 119 aaPredicted RBP9.84□□□□□ -0.83
CHMP3-201ENST00000263856 BCL6BQ8N143 479 aaPredicted RBP9.84□□□□□ -0.83
CHMP3-201ENST00000263856 OTORQ9NRC9 128 aa9.84□□□□□ -0.83
CHMP3-201ENST00000263856 F11RQ9Y624 299 aaKnown RBP9.84□□□□□ -0.83
CHMP3-201ENST00000263856 TMEM213A2RRL7 107 aa9.84□□□□□ -0.83
CHMP3-201ENST00000263856 VSTM5A8MXK1 200 aa9.84□□□□□ -0.83
CHMP3-201ENST00000263856 SMKR1H3BMG3 65 aa9.84□□□□□ -0.83
CHMP3-201ENST00000263856 IGLC1P0CG04 106 aa9.84□□□□□ -0.83
CHMP3-201ENST00000263856 LOXL1Q08397 574 aaPredicted RBP9.84□□□□□ -0.83
CHMP3-201ENST00000263856 RIGQ13278 110 aa9.84□□□□□ -0.83
CHMP3-201ENST00000263856 MRGPRG-AS1Q2M3A8 158 aa9.84□□□□□ -0.83
CHMP3-201ENST00000263856 FAM57AQ8TBR7 257 aa9.84□□□□□ -0.83
CHMP3-201ENST00000263856 COL6A6A6NMZ7 2263 aa9.84□□□□□ -0.84
CHMP3-201ENST00000263856 TAX1BP3O14907 124 aa9.83□□□□□ -0.84
CHMP3-201ENST00000263856 RBX1P62877 108 aa9.83□□□□□ -0.84
CHMP3-201ENST00000263856 TMEM155Q4W5P6 130 aa9.83□□□□□ -0.84
CHMP3-201ENST00000263856 TM4SF20Q53R12 229 aa9.83□□□□□ -0.84
CHMP3-201ENST00000263856 GFRALQ6UXV0 394 aa9.83□□□□□ -0.84
CHMP3-201ENST00000263856 BPIFA4PQ86YQ2 179 aa9.83□□□□□ -0.84
CHMP3-201ENST00000263856 RAB37Q96AX2 223 aa9.83□□□□□ -0.84
CHMP3-201ENST00000263856 NGBQ9NPG2 151 aa9.83□□□□□ -0.84
CHMP3-201ENST00000263856 PSG8Q9UQ74 426 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms