RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 IFI27L1Q96BM0 104 aa9.86□□□□□ -0.83
CHMP2B-201ENST00000263780 SPOCK3Q9BQ16 436 aa9.86□□□□□ -0.83
CHMP2B-201ENST00000263780 PSG8Q9UQ74 426 aa9.86□□□□□ -0.83
CHMP2B-201ENST00000263780 TANC2Q9HCD6 1990 aa9.86□□□□□ -0.83
CHMP2B-201ENST00000263780 AHCTF1Q8WYP5 2266 aa9.86□□□□□ -0.83
CHMP2B-201ENST00000263780 HES3Q5TGS1 186 aa9.86□□□□□ -0.83
CHMP2B-201ENST00000263780 S100A7AQ86SG5 101 aa9.86□□□□□ -0.83
CHMP2B-201ENST00000263780 RAB37Q96AX2 223 aa9.86□□□□□ -0.83
CHMP2B-201ENST00000263780 A0A096LNJ9 63 aa9.85□□□□□ -0.83
CHMP2B-201ENST00000263780 SHISA9B4DS77 424 aa9.85□□□□□ -0.83
CHMP2B-201ENST00000263780 D6R8Y8 96 aa9.85□□□□□ -0.83
CHMP2B-201ENST00000263780 PSG3Q16557 428 aa9.85□□□□□ -0.83
CHMP2B-201ENST00000263780 EXOC3-AS1Q8N2X6 119 aa9.85□□□□□ -0.83
CHMP2B-201ENST00000263780 HIGD1BQ9P298 99 aa9.85□□□□□ -0.83
CHMP2B-201ENST00000263780 LOC389332A0A1B0GUA5 103 aa9.85□□□□□ -0.83
CHMP2B-201ENST00000263780 TMEM189A5PLL7 270 aa9.85□□□□□ -0.83
CHMP2B-201ENST00000263780 FBLL1A6NHQ2 334 aaKnown RBP9.85□□□□□ -0.83
CHMP2B-201ENST00000263780 J3QR89 54 aa9.85□□□□□ -0.83
CHMP2B-201ENST00000263780 LINC01559Q495D7 138 aa9.85□□□□□ -0.83
CHMP2B-201ENST00000263780 LHFPL4Q7Z7J7 247 aa9.85□□□□□ -0.83
CHMP2B-201ENST00000263780 ABHD17AQ96GS6 310 aa9.85□□□□□ -0.83
CHMP2B-201ENST00000263780 TPPP3Q9BW30 176 aa9.85□□□□□ -0.83
CHMP2B-201ENST00000263780 NGBQ9NPG2 151 aa9.85□□□□□ -0.83
CHMP2B-201ENST00000263780 MED13Q9UHV7 2174 aa9.85□□□□□ -0.83
CHMP2B-201ENST00000263780 TRBV19A0A075B6N1 114 aa9.84□□□□□ -0.83
CHMP2B-201ENST00000263780 THBDP07204 575 aa9.84□□□□□ -0.83
CHMP2B-201ENST00000263780 NMUP48645 174 aa9.84□□□□□ -0.83
CHMP2B-201ENST00000263780 TMEM200BQ69YZ2 307 aa9.84□□□□□ -0.83
CHMP2B-201ENST00000263780 DSCAMO60469 2012 aa9.84□□□□□ -0.83
CHMP2B-201ENST00000263780 PCNX2A6NKB5 2137 aa9.84□□□□□ -0.83
CHMP2B-201ENST00000263780 HEATR1Q9H583 2144 aaKnown RBP9.84□□□□□ -0.83
CHMP2B-201ENST00000263780 C19orf67A6NJJ6 358 aa9.84□□□□□ -0.83
CHMP2B-201ENST00000263780 K7EM74 188 aa9.84□□□□□ -0.83
CHMP2B-201ENST00000263780 ENSAO43768 121 aaKnown RBP9.84□□□□□ -0.83
CHMP2B-201ENST00000263780 PIP4P2Q8N4L2 257 aa9.84□□□□□ -0.83
CHMP2B-201ENST00000263780 RASL11BQ9BPW5 248 aa9.84□□□□□ -0.83
CHMP2B-201ENST00000263780 INSIG2Q9Y5U4 225 aa9.84□□□□□ -0.83
CHMP2B-201ENST00000263780 F11RQ9Y624 299 aaKnown RBP9.84□□□□□ -0.83
CHMP2B-201ENST00000263780 EYSQ5T1H1 3165 aa9.84□□□□□ -0.83
CHMP2B-201ENST00000263780 TRAV17A0A0B4J275 112 aa9.83□□□□□ -0.84
CHMP2B-201ENST00000263780 CCL3L1P16619 93 aa9.83□□□□□ -0.84
CHMP2B-201ENST00000263780 RPL24P83731 157 aaKnown RBP9.83□□□□□ -0.84
CHMP2B-201ENST00000263780 PLGLAQ15195 96 aa9.83□□□□□ -0.84
CHMP2B-201ENST00000263780 SIGMAR1Q99720 223 aa9.83□□□□□ -0.84
CHMP2B-201ENST00000263780 DYSFO75923 2080 aa9.83□□□□□ -0.84
CHMP2B-201ENST00000263780 ZNF785A8K8V0 405 aa9.83□□□□□ -0.84
CHMP2B-201ENST00000263780 FAM106CPP0CH98 169 aa9.83□□□□□ -0.84
CHMP2B-201ENST00000263780 FAM106AQ4KMX7 169 aa9.83□□□□□ -0.84
CHMP2B-201ENST00000263780 ATP1A1-AS1Q5TC04 95 aa9.83□□□□□ -0.84
CHMP2B-201ENST00000263780 WFDC8Q8IUA0 241 aa9.83□□□□□ -0.84
CHMP2B-201ENST00000263780 TNFRSF14Q92956 283 aa9.83□□□□□ -0.84
CHMP2B-201ENST00000263780 NAA38Q9BRA0 125 aaKnown RBP9.83□□□□□ -0.84
CHMP2B-201ENST00000263780 KLK10O43240 276 aa9.82□□□□□ -0.84
CHMP2B-201ENST00000263780 LOXL1Q08397 574 aaPredicted RBP9.82□□□□□ -0.84
CHMP2B-201ENST00000263780 LYZL1Q6UWQ5 148 aa9.82□□□□□ -0.84
CHMP2B-201ENST00000263780 SHANK2-AS3Q9BTD1 123 aa9.82□□□□□ -0.84
CHMP2B-201ENST00000263780 TPSG1Q9NRR2 321 aa9.82□□□□□ -0.84
CHMP2B-201ENST00000263780 WDFY3Q8IZQ1 3526 aa9.82□□□□□ -0.84
CHMP2B-201ENST00000263780 MBD3L4A6NDZ8 208 aaPredicted RBP9.82□□□□□ -0.84
CHMP2B-201ENST00000263780 MBD3L3A6NE82 208 aaPredicted RBP9.82□□□□□ -0.84
CHMP2B-201ENST00000263780 MBD3L5A6NJ08 208 aaPredicted RBP9.82□□□□□ -0.84
CHMP2B-201ENST00000263780 NDUFS7O75251 213 aa9.82□□□□□ -0.84
CHMP2B-201ENST00000263780 CKS2P33552 79 aa9.82□□□□□ -0.84
CHMP2B-201ENST00000263780 MRGPRG-AS1Q2M3A8 158 aa9.82□□□□□ -0.84
CHMP2B-201ENST00000263780 RUSC1-AS1Q66K80 236 aa9.82□□□□□ -0.84
CHMP2B-201ENST00000263780 CLEC2AQ6UVW9 174 aa9.82□□□□□ -0.84
CHMP2B-201ENST00000263780 MBD3L2Q8NHZ7 208 aaPredicted RBP9.82□□□□□ -0.84
CHMP2B-201ENST00000263780 NDUFB3O43676 98 aa9.81□□□□□ -0.84
CHMP2B-201ENST00000263780 PAX8Q06710 450 aa9.81□□□□□ -0.84
CHMP2B-201ENST00000263780 DHRS13Q6UX07 377 aa9.81□□□□□ -0.84
CHMP2B-201ENST00000263780 SIGLEC15Q6ZMC9 328 aa9.81□□□□□ -0.84
CHMP2B-201ENST00000263780 ASCL5Q7RTU5 278 aa9.81□□□□□ -0.84
CHMP2B-201ENST00000263780 PCP2Q8IVA1 136 aa9.81□□□□□ -0.84
CHMP2B-201ENST00000263780 IGHV3-21A0A0B4J1V1 117 aa9.81□□□□□ -0.84
CHMP2B-201ENST00000263780 RBP4P02753 201 aa9.81□□□□□ -0.84
CHMP2B-201ENST00000263780 FTH1P19P0C7X4 201 aa9.81□□□□□ -0.84
CHMP2B-201ENST00000263780 GCSHP23434 173 aa9.81□□□□□ -0.84
CHMP2B-201ENST00000263780 CRIP1P50238 77 aa9.81□□□□□ -0.84
CHMP2B-201ENST00000263780 MRPL51Q4U2R6 128 aaKnown RBP9.81□□□□□ -0.84
CHMP2B-201ENST00000263780 AMN1Q8IY45 258 aa9.81□□□□□ -0.84
CHMP2B-201ENST00000263780 BCL6BQ8N143 479 aaPredicted RBP9.81□□□□□ -0.84
CHMP2B-201ENST00000263780 VGLL1Q99990 258 aa9.81□□□□□ -0.84
CHMP2B-201ENST00000263780 AAMDCQ9H7C9 122 aa9.81□□□□□ -0.84
CHMP2B-201ENST00000263780 SMPXQ9UHP9 88 aa9.81□□□□□ -0.84
CHMP2B-201ENST00000263780 F8W1H4 67 aa9.8□□□□□ -0.84
CHMP2B-201ENST00000263780 CCL11P51671 97 aa9.8□□□□□ -0.84
CHMP2B-201ENST00000263780 SRSF1Q07955 248 aaKnown RBP eCLIP9.8□□□□□ -0.84
CHMP2B-201ENST00000263780 PDE6HQ13956 83 aa9.8□□□□□ -0.84
CHMP2B-201ENST00000263780 DIAPH2-AS1Q14236 149 aa9.8□□□□□ -0.84
CHMP2B-201ENST00000263780 C1orf210Q8IVY1 113 aa9.8□□□□□ -0.84
CHMP2B-201ENST00000263780 SRSF8Q9BRL6 282 aaKnown RBP9.8□□□□□ -0.84
CHMP2B-201ENST00000263780 H3BRN7 92 aa9.8□□□□□ -0.84
CHMP2B-201ENST00000263780 CRYGBP07316 175 aa9.8□□□□□ -0.84
CHMP2B-201ENST00000263780 TMEM133Q9H2Q1 129 aa9.8□□□□□ -0.84
CHMP2B-201ENST00000263780 SIGLEC9Q9Y336 463 aa9.8□□□□□ -0.84
CHMP2B-201ENST00000263780 PRR14LQ5THK1 2151 aa9.8□□□□□ -0.84
CHMP2B-201ENST00000263780 CACNA1GO43497 2377 aa9.8□□□□□ -0.84
CHMP2B-201ENST00000263780 PPIAL4EA0A075B759 164 aa9.79□□□□□ -0.84
CHMP2B-201ENST00000263780 PPIAL4CA0A0B4J2A2 164 aa9.79□□□□□ -0.84
CHMP2B-201ENST00000263780 PPIAL4FP0DN26 164 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms