RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 IGHV1-24A0A0C4DH33 117 aa7.26□□□□□ -1.25
MSH4-201ENST00000263187 SERTM2A0A1B0GWG4 89 aa7.26□□□□□ -1.25
MSH4-201ENST00000263187 GP9P14770 177 aa7.26□□□□□ -1.25
MSH4-201ENST00000263187 ARF6P62330 175 aa7.26□□□□□ -1.25
MSH4-201ENST00000263187 FBLN7Q53RD9 439 aa7.26□□□□□ -1.25
MSH4-201ENST00000263187 IGF2-ASQ6U949 168 aa7.26□□□□□ -1.25
MSH4-201ENST00000263187 PPP1R27Q86WC6 154 aa7.26□□□□□ -1.25
MSH4-201ENST00000263187 NUP37Q8NFH4 326 aa7.26□□□□□ -1.25
MSH4-201ENST00000263187 RPEQ96AT9 228 aa7.26□□□□□ -1.25
MSH4-201ENST00000263187 SPG11Q96JI7 2443 aa7.26□□□□□ -1.25
MSH4-201ENST00000263187 IGHV1-3A0A0C4DH29 117 aa7.26□□□□□ -1.25
MSH4-201ENST00000263187 FAM90A27PA6NNH2 459 aa7.26□□□□□ -1.25
MSH4-201ENST00000263187 CCL25O15444 150 aa7.26□□□□□ -1.25
MSH4-201ENST00000263187 LEPROTL1O95214 131 aa7.26□□□□□ -1.25
MSH4-201ENST00000263187 KLRD1Q13241 179 aa7.26□□□□□ -1.25
MSH4-201ENST00000263187 TMEM155Q4W5P6 130 aa7.26□□□□□ -1.25
MSH4-201ENST00000263187 THAP8Q8NA92 274 aa7.26□□□□□ -1.25
MSH4-201ENST00000263187 ZNF596Q8TC21 504 aa7.26□□□□□ -1.25
MSH4-201ENST00000263187 RASL11BQ9BPW5 248 aa7.26□□□□□ -1.25
MSH4-201ENST00000263187 TRAV9-2A0A087WT02 112 aa7.25□□□□□ -1.25
MSH4-201ENST00000263187 A8MWL6 223 aa7.25□□□□□ -1.25
MSH4-201ENST00000263187 ARMS2P0C7Q2 107 aa7.25□□□□□ -1.25
MSH4-201ENST00000263187 HTR1DP28221 377 aa7.25□□□□□ -1.25
MSH4-201ENST00000263187 FCGR2BP31994 310 aaPredicted RBP7.25□□□□□ -1.25
MSH4-201ENST00000263187 MYCNOSP40205 109 aa7.25□□□□□ -1.25
MSH4-201ENST00000263187 FOXE3Q13461 319 aa7.25□□□□□ -1.25
MSH4-201ENST00000263187 MPV17L2Q567V2 206 aa7.25□□□□□ -1.25
MSH4-201ENST00000263187 KLHDC1Q8N7A1 406 aa7.25□□□□□ -1.25
MSH4-201ENST00000263187 C5orf17Q8NAS9 161 aa7.25□□□□□ -1.25
MSH4-201ENST00000263187 TMEM70Q9BUB7 260 aa7.25□□□□□ -1.25
MSH4-201ENST00000263187 TMUB1Q9BVT8 246 aa7.25□□□□□ -1.25
MSH4-201ENST00000263187 SLC25A39Q9BZJ4 359 aaPredicted RBP7.25□□□□□ -1.25
MSH4-201ENST00000263187 RNF24Q9Y225 148 aa7.25□□□□□ -1.25
MSH4-201ENST00000263187 ZFP30Q9Y2G7 519 aa7.25□□□□□ -1.25
MSH4-201ENST00000263187 C20orf202A1L168 122 aa7.25□□□□□ -1.25
MSH4-201ENST00000263187 CBY3A6NI87 242 aa7.25□□□□□ -1.25
MSH4-201ENST00000263187 FAM106CPP0CH98 169 aa7.25□□□□□ -1.25
MSH4-201ENST00000263187 COX19Q49B96 90 aa7.25□□□□□ -1.25
MSH4-201ENST00000263187 FAM106AQ4KMX7 169 aa7.25□□□□□ -1.25
MSH4-201ENST00000263187 LDLRAD2Q5SZI1 272 aa7.25□□□□□ -1.25
MSH4-201ENST00000263187 FAM231DQ6ZW35 169 aa7.25□□□□□ -1.25
MSH4-201ENST00000263187 WFDC3Q8IUB2 231 aa7.25□□□□□ -1.25
MSH4-201ENST00000263187 TEX45Q8NA69 505 aa7.25□□□□□ -1.25
MSH4-201ENST00000263187 OR8B3Q8NGG8 313 aa7.25□□□□□ -1.25
MSH4-201ENST00000263187 IL4P05112 153 aa7.25□□□□□ -1.25
MSH4-201ENST00000263187 DLX6P56179 175 aa7.25□□□□□ -1.25
MSH4-201ENST00000263187 IGFL3Q6UXB1 125 aa7.25□□□□□ -1.25
MSH4-201ENST00000263187 C8orf46Q8TAG6 207 aa7.25□□□□□ -1.25
MSH4-201ENST00000263187 TIMM23O14925 209 aa7.24□□□□□ -1.25
MSH4-201ENST00000263187 MC5RP33032 325 aa7.24□□□□□ -1.25
MSH4-201ENST00000263187 C8orf49Q96NF6 230 aa7.24□□□□□ -1.25
MSH4-201ENST00000263187 MLST8Q9BVC4 326 aa7.24□□□□□ -1.25
MSH4-201ENST00000263187 MRPL27Q9P0M9 148 aaKnown RBP7.24□□□□□ -1.25
MSH4-201ENST00000263187 PPIAL4CA0A0B4J2A2 164 aa7.24□□□□□ -1.25
MSH4-201ENST00000263187 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.24□□□□□ -1.25
MSH4-201ENST00000263187 A0A1B0GXF2 115 aa7.24□□□□□ -1.25
MSH4-201ENST00000263187 SHISA9B4DS77 424 aa7.24□□□□□ -1.25
MSH4-201ENST00000263187 TEX22C9J3V5 150 aa7.24□□□□□ -1.25
MSH4-201ENST00000263187 LTAP01374 205 aa7.24□□□□□ -1.25
MSH4-201ENST00000263187 LINC00614P0C842 121 aa7.24□□□□□ -1.25
MSH4-201ENST00000263187 PPIAL4GP0DN37 164 aa7.24□□□□□ -1.25
MSH4-201ENST00000263187 LGALS7P47929 136 aa7.24□□□□□ -1.25
MSH4-201ENST00000263187 ATP5IP56385 69 aaPredicted RBP7.24□□□□□ -1.25
MSH4-201ENST00000263187 ETFRF1Q6IPR1 90 aa7.24□□□□□ -1.25
MSH4-201ENST00000263187 TMEM116Q8NCL8 245 aa7.24□□□□□ -1.25
MSH4-201ENST00000263187 LOC102724200A0A096LPH7 203 aaPredicted RBP7.23□□□□□ -1.25
MSH4-201ENST00000263187 BUB1B-PAK6H3BSN5 160 aa7.23□□□□□ -1.25
MSH4-201ENST00000263187 NUDT3O95989 172 aa7.23□□□□□ -1.25
MSH4-201ENST00000263187 TOMM40O96008 361 aa7.23□□□□□ -1.25
MSH4-201ENST00000263187 IGLC1P0CG04 106 aa7.23□□□□□ -1.25
MSH4-201ENST00000263187 FAM120AOSQ5T036 256 aa7.23□□□□□ -1.25
MSH4-201ENST00000263187 RBPMS2Q6ZRY4 209 aaKnown RBP7.23□□□□□ -1.25
MSH4-201ENST00000263187 Q86TA4 180 aa7.23□□□□□ -1.25
MSH4-201ENST00000263187 WIPF2Q8TF74 440 aaPredicted RBP7.23□□□□□ -1.25
MSH4-201ENST00000263187 F11RQ9Y624 299 aaKnown RBP7.23□□□□□ -1.25
MSH4-201ENST00000263187 A0A087X0K7 114 aa7.23□□□□□ -1.25
MSH4-201ENST00000263187 SYS1-DBNDD2H3BUS1 97 aa7.23□□□□□ -1.25
MSH4-201ENST00000263187 IGKV1-17P01599 117 aa7.23□□□□□ -1.25
MSH4-201ENST00000263187 VAMP3Q15836 100 aa7.23□□□□□ -1.25
MSH4-201ENST00000263187 RNF151Q2KHN1 245 aa7.23□□□□□ -1.25
MSH4-201ENST00000263187 STXBP6Q8NFX7 210 aa7.23□□□□□ -1.25
MSH4-201ENST00000263187 OR4A5Q8NH83 315 aa7.23□□□□□ -1.25
MSH4-201ENST00000263187 TRGV9Q99603 122 aa7.23□□□□□ -1.25
MSH4-201ENST00000263187 IGHV3OR16-13A0A075B7E8 117 aa7.23□□□□□ -1.25
MSH4-201ENST00000263187 IGHV3-74A0A0B4J1X5 117 aa7.23□□□□□ -1.25
MSH4-201ENST00000263187 NCBP2LA6PVI3 153 aaKnown RBP7.23□□□□□ -1.25
MSH4-201ENST00000263187 LOXL1Q08397 574 aaPredicted RBP7.23□□□□□ -1.25
MSH4-201ENST00000263187 Q8NA96 180 aa7.23□□□□□ -1.25
MSH4-201ENST00000263187 OR8A1Q8NGG7 326 aa7.23□□□□□ -1.25
MSH4-201ENST00000263187 FMC1Q96HJ9 113 aa7.23□□□□□ -1.25
MSH4-201ENST00000263187 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.22□□□□□ -1.25
MSH4-201ENST00000263187 C19orf71A6NCJ1 209 aa7.22□□□□□ -1.25
MSH4-201ENST00000263187 ZNF785A8K8V0 405 aa7.22□□□□□ -1.25
MSH4-201ENST00000263187 SMKR1H3BMG3 65 aa7.22□□□□□ -1.25
MSH4-201ENST00000263187 APOHP02749 345 aaPredicted RBP7.22□□□□□ -1.25
MSH4-201ENST00000263187 CRYGCP07315 174 aa7.22□□□□□ -1.25
MSH4-201ENST00000263187 OR4F17Q8NGA8 305 aa7.22□□□□□ -1.25
MSH4-201ENST00000263187 Q8TAT8 98 aa7.22□□□□□ -1.25
MSH4-201ENST00000263187 RNASE8Q8TDE3 154 aaKnown RBP7.22□□□□□ -1.25
MSH4-201ENST00000263187 RBM14Q96PK6 669 aaKnown RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms