RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 MEF2CQ06413 473 aaPredicted RBP11.99□□□□□ -0.49
XRCC1-201ENST00000262887 TMEM116Q8NCL8 245 aa11.99□□□□□ -0.49
XRCC1-201ENST00000262887 FLYWCH2Q96CP2 140 aaKnown RBP11.99□□□□□ -0.49
XRCC1-201ENST00000262887 DSCAMO60469 2012 aa11.99□□□□□ -0.49
XRCC1-201ENST00000262887 CGB1A6NKQ9 187 aa11.98□□□□□ -0.49
XRCC1-201ENST00000262887 RIGQ13278 110 aa11.98□□□□□ -0.49
XRCC1-201ENST00000262887 ZNF833PQ6ZTB9 187 aa11.98□□□□□ -0.49
XRCC1-201ENST00000262887 Q86TA4 180 aa11.98□□□□□ -0.49
XRCC1-201ENST00000262887 ZCCHC24Q8N2G6 241 aaKnown RBP11.98□□□□□ -0.49
XRCC1-201ENST00000262887 FAM216BQ8N7L0 139 aa11.98□□□□□ -0.49
XRCC1-201ENST00000262887 TMEM178AQ8NBL3 297 aa11.98□□□□□ -0.49
XRCC1-201ENST00000262887 OR4X2Q8NGF9 303 aa11.98□□□□□ -0.49
XRCC1-201ENST00000262887 FER1L6-AS2Q96M78 137 aa11.98□□□□□ -0.49
XRCC1-201ENST00000262887 CCL13Q99616 98 aa11.98□□□□□ -0.49
XRCC1-201ENST00000262887 DYSFO75923 2080 aa11.98□□□□□ -0.49
XRCC1-201ENST00000262887 hADV38S2A0JD32 116 aa11.98□□□□□ -0.49
XRCC1-201ENST00000262887 SIVA1O15304 175 aa11.98□□□□□ -0.49
XRCC1-201ENST00000262887 TMEM164Q5U3C3 297 aa11.98□□□□□ -0.49
XRCC1-201ENST00000262887 ADAMTSL5Q6ZMM2 481 aa11.98□□□□□ -0.49
XRCC1-201ENST00000262887 RPRMLQ8N4K4 120 aa11.98□□□□□ -0.49
XRCC1-201ENST00000262887 PIP4P2Q8N4L2 257 aa11.98□□□□□ -0.49
XRCC1-201ENST00000262887 HEATR1Q9H583 2144 aaKnown RBP11.97□□□□□ -0.49
XRCC1-201ENST00000262887 TMEM189A5PLL7 270 aa11.97□□□□□ -0.49
XRCC1-201ENST00000262887 ARMS2P0C7Q2 107 aa11.97□□□□□ -0.49
XRCC1-201ENST00000262887 GP9P14770 177 aa11.97□□□□□ -0.49
XRCC1-201ENST00000262887 TCTAP57738 103 aa11.97□□□□□ -0.49
XRCC1-201ENST00000262887 PEAR1Q5VY43 1037 aaPredicted RBP11.97□□□□□ -0.49
XRCC1-201ENST00000262887 CCDC144NLQ6NUI1 221 aa11.97□□□□□ -0.49
XRCC1-201ENST00000262887 ZNF788Q6ZQV5 615 aa11.97□□□□□ -0.49
XRCC1-201ENST00000262887 C9orf106Q8NAJ2 232 aa11.97□□□□□ -0.49
XRCC1-201ENST00000262887 GAFA1Q96PS6 74 aa11.97□□□□□ -0.49
XRCC1-201ENST00000262887 TSSC4Q9Y5U2 329 aaPredicted RBP11.97□□□□□ -0.49
XRCC1-201ENST00000262887 OVOL3O00110 214 aa11.97□□□□□ -0.49
XRCC1-201ENST00000262887 LGALS9BQ3B8N2 356 aa11.97□□□□□ -0.49
XRCC1-201ENST00000262887 TCTEX1D4Q5JR98 221 aa11.97□□□□□ -0.49
XRCC1-201ENST00000262887 LGALS9CQ6DKI2 356 aa11.97□□□□□ -0.49
XRCC1-201ENST00000262887 COL27A1Q8IZC6 1860 aaPredicted RBP11.97□□□□□ -0.49
XRCC1-201ENST00000262887 ZADH2Q8N4Q0 377 aa11.97□□□□□ -0.49
XRCC1-201ENST00000262887 TMEM167AQ8TBQ9 72 aa11.97□□□□□ -0.49
XRCC1-201ENST00000262887 FABP2P12104 132 aa11.96□□□□□ -0.49
XRCC1-201ENST00000262887 TMEM30BQ3MIR4 351 aa11.96□□□□□ -0.49
XRCC1-201ENST00000262887 PRNTQ86SH4 94 aa11.96□□□□□ -0.49
XRCC1-201ENST00000262887 COL25A1Q9BXS0 654 aaPredicted RBP11.96□□□□□ -0.49
XRCC1-201ENST00000262887 LINC00574Q9H8X3 128 aa11.96□□□□□ -0.49
XRCC1-201ENST00000262887 RNF7Q9UBF6 113 aa11.96□□□□□ -0.49
XRCC1-201ENST00000262887 MUC6Q6W4X9 2439 aa11.96□□□□□ -0.49
XRCC1-201ENST00000262887 TM4SF5O14894 197 aa11.96□□□□□ -0.49
XRCC1-201ENST00000262887 FTH1P19P0C7X4 201 aa11.96□□□□□ -0.49
XRCC1-201ENST00000262887 FAM106CPP0CH98 169 aa11.96□□□□□ -0.49
XRCC1-201ENST00000262887 IFI27P40305 119 aaPredicted RBP11.96□□□□□ -0.49
XRCC1-201ENST00000262887 FAM106AQ4KMX7 169 aa11.96□□□□□ -0.49
XRCC1-201ENST00000262887 RUSC1-AS1Q66K80 236 aa11.96□□□□□ -0.49
XRCC1-201ENST00000262887 ZNF292O60281 2723 aa11.96□□□□□ -0.5
XRCC1-201ENST00000262887 A0A096LNJ9 63 aa11.96□□□□□ -0.5
XRCC1-201ENST00000262887 SPAARA0A1B0GVQ0 90 aa11.96□□□□□ -0.5
XRCC1-201ENST00000262887 A0A1W2PNU3 283 aaPredicted RBP11.96□□□□□ -0.5
XRCC1-201ENST00000262887 ATP1A1-AS1Q5TC04 95 aa11.96□□□□□ -0.5
XRCC1-201ENST00000262887 OR4C13Q8NGP0 309 aa11.96□□□□□ -0.5
XRCC1-201ENST00000262887 SRSF12Q8WXF0 261 aaKnown RBP11.96□□□□□ -0.5
XRCC1-201ENST00000262887 CACNG7P62955 275 aa11.95□□□□□ -0.5
XRCC1-201ENST00000262887 GATD1Q8NB37 220 aa11.95□□□□□ -0.5
XRCC1-201ENST00000262887 ABHD17AQ96GS6 310 aa11.95□□□□□ -0.5
XRCC1-201ENST00000262887 NAV3Q8IVL0 2385 aa11.95□□□□□ -0.5
XRCC1-201ENST00000262887 MAP1BP46821 2468 aaKnown RBP11.95□□□□□ -0.5
XRCC1-201ENST00000262887 RELNP78509 3460 aa11.95□□□□□ -0.5
XRCC1-201ENST00000262887 K7EQM0 130 aa11.95□□□□□ -0.5
XRCC1-201ENST00000262887 LOXL1Q08397 574 aaPredicted RBP11.95□□□□□ -0.5
XRCC1-201ENST00000262887 GOLT1AQ6ZVE7 132 aa11.95□□□□□ -0.5
XRCC1-201ENST00000262887 Q71RC1 249 aaPredicted RBP11.95□□□□□ -0.5
XRCC1-201ENST00000262887 INSIG2Q9Y5U4 225 aa11.95□□□□□ -0.5
XRCC1-201ENST00000262887 ZZEF1O43149 2961 aa11.95□□□□□ -0.5
XRCC1-201ENST00000262887 CACNA1GO43497 2377 aa11.95□□□□□ -0.5
XRCC1-201ENST00000262887 A0A1B0GW15 77 aa11.94□□□□□ -0.5
XRCC1-201ENST00000262887 ZNF207O43670 478 aaKnown RBP11.94□□□□□ -0.5
XRCC1-201ENST00000262887 HCP5Q6MZN7 132 aa11.94□□□□□ -0.5
XRCC1-201ENST00000262887 OR10X1Q8NGY0 326 aa11.94□□□□□ -0.5
XRCC1-201ENST00000262887 LOC389332A0A1B0GUA5 103 aa11.94□□□□□ -0.5
XRCC1-201ENST00000262887 A0A1W2PPI3 338 aa11.94□□□□□ -0.5
XRCC1-201ENST00000262887 C5orf64Q2M2E5 130 aa11.94□□□□□ -0.5
XRCC1-201ENST00000262887 SAMD5Q5TGI4 173 aa11.94□□□□□ -0.5
XRCC1-201ENST00000262887 MRAP2Q96G30 205 aa11.94□□□□□ -0.5
XRCC1-201ENST00000262887 TRGV9Q99603 122 aa11.94□□□□□ -0.5
XRCC1-201ENST00000262887 TPPP3Q9BW30 176 aa11.94□□□□□ -0.5
XRCC1-201ENST00000262887 OTORQ9NRC9 128 aa11.94□□□□□ -0.5
XRCC1-201ENST00000262887 M0R1B8 84 aa11.93□□□□□ -0.5
XRCC1-201ENST00000262887 IGLV2-11P01706 119 aa11.93□□□□□ -0.5
XRCC1-201ENST00000262887 NMUP48645 174 aa11.93□□□□□ -0.5
XRCC1-201ENST00000262887 SPATA25Q9BR10 227 aa11.93□□□□□ -0.5
XRCC1-201ENST00000262887 GEMIN7Q9H840 131 aaKnown RBP11.93□□□□□ -0.5
XRCC1-201ENST00000262887 ZNF71Q9NQZ8 489 aaPredicted RBP11.93□□□□□ -0.5
XRCC1-201ENST00000262887 IGHV3-21A0A0B4J1V1 117 aa11.93□□□□□ -0.5
XRCC1-201ENST00000262887 TIMM23BQ5SRD1 257 aa11.93□□□□□ -0.5
XRCC1-201ENST00000262887 EXOC3-AS1Q8N2X6 119 aa11.93□□□□□ -0.5
XRCC1-201ENST00000262887 C8orf46Q8TAG6 207 aa11.93□□□□□ -0.5
XRCC1-201ENST00000262887 SIGLEC8Q9NYZ4 499 aa11.93□□□□□ -0.5
XRCC1-201ENST00000262887 SLC25A15Q9Y619 301 aa11.93□□□□□ -0.5
XRCC1-201ENST00000262887 LINC00312Q9Y6C7 94 aa11.93□□□□□ -0.5
XRCC1-201ENST00000262887 CEP250Q9BV73 2442 aa11.92□□□□□ -0.5
XRCC1-201ENST00000262887 SMIM13P0DJ93 91 aa11.92□□□□□ -0.5
XRCC1-201ENST00000262887 PCP2Q8IVA1 136 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms