RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 CHRDL1Q9BU40 450 aa11.58□□□□□ -0.56
SFSWAP-201ENST00000261674 RPP21Q9H633 154 aaKnown RBP11.58□□□□□ -0.56
SFSWAP-201ENST00000261674 NOTCH2Q04721 2471 aa11.57□□□□□ -0.56
SFSWAP-201ENST00000261674 OR4C46A6NHA9 309 aa11.57□□□□□ -0.56
SFSWAP-201ENST00000261674 CNIH1O95406 144 aa11.57□□□□□ -0.56
SFSWAP-201ENST00000261674 SPATA12Q7Z6I5 190 aa11.57□□□□□ -0.56
SFSWAP-201ENST00000261674 TRAV9-2A0A087WT02 112 aa11.57□□□□□ -0.56
SFSWAP-201ENST00000261674 NDUFB8O95169 186 aa11.57□□□□□ -0.56
SFSWAP-201ENST00000261674 IGLV2-23P01705 113 aa11.57□□□□□ -0.56
SFSWAP-201ENST00000261674 ZNF596Q8TC21 504 aa11.57□□□□□ -0.56
SFSWAP-201ENST00000261674 GTSF1Q8WW33 167 aa11.57□□□□□ -0.56
SFSWAP-201ENST00000261674 MRPL27Q9P0M9 148 aaKnown RBP11.57□□□□□ -0.56
SFSWAP-201ENST00000261674 CA7P43166 264 aa11.56□□□□□ -0.56
SFSWAP-201ENST00000261674 ADORA2A-AS1P86434 159 aa11.56□□□□□ -0.56
SFSWAP-201ENST00000261674 TMEM70Q9BUB7 260 aa11.56□□□□□ -0.56
SFSWAP-201ENST00000261674 MUC21A0A0G2JKD1 596 aa11.56□□□□□ -0.56
SFSWAP-201ENST00000261674 MUC21A0A140T8X8 626 aa11.56□□□□□ -0.56
SFSWAP-201ENST00000261674 SNAI2O43623 268 aa11.56□□□□□ -0.56
SFSWAP-201ENST00000261674 LEPROTL1O95214 131 aa11.56□□□□□ -0.56
SFSWAP-201ENST00000261674 MUC21Q5SSG8 566 aa11.56□□□□□ -0.56
SFSWAP-201ENST00000261674 FAM231DQ6ZW35 169 aa11.56□□□□□ -0.56
SFSWAP-201ENST00000261674 LINC00574Q9H8X3 128 aa11.56□□□□□ -0.56
SFSWAP-201ENST00000261674 TMSB15BA0A087X1C1 80 aa11.56□□□□□ -0.56
SFSWAP-201ENST00000261674 PSG1P11464 419 aa11.56□□□□□ -0.56
SFSWAP-201ENST00000261674 STXBP6Q8NFX7 210 aa11.56□□□□□ -0.56
SFSWAP-201ENST00000261674 IGLC7A0M8Q6 106 aa11.55□□□□□ -0.56
SFSWAP-201ENST00000261674 LOXP28300 417 aaPredicted RBP11.55□□□□□ -0.56
SFSWAP-201ENST00000261674 ETFRF1Q6IPR1 90 aa11.55□□□□□ -0.56
SFSWAP-201ENST00000261674 C5orf17Q8NAS9 161 aa11.55□□□□□ -0.56
SFSWAP-201ENST00000261674 A1L4Q6 167 aa11.55□□□□□ -0.56
SFSWAP-201ENST00000261674 TCRAP04437 139 aa11.55□□□□□ -0.56
SFSWAP-201ENST00000261674 HTR1DP28221 377 aa11.55□□□□□ -0.56
SFSWAP-201ENST00000261674 SRSF12Q8WXF0 261 aaKnown RBP11.55□□□□□ -0.56
SFSWAP-201ENST00000261674 C17orf77Q96MU5 243 aa11.55□□□□□ -0.56
SFSWAP-201ENST00000261674 HIGD1AQ9Y241 93 aa11.55□□□□□ -0.56
SFSWAP-201ENST00000261674 IGHV1-8P0DP01 117 aa11.54□□□□□ -0.56
SFSWAP-201ENST00000261674 MC5RP33032 325 aa11.54□□□□□ -0.56
SFSWAP-201ENST00000261674 VAMP3Q15836 100 aa11.54□□□□□ -0.56
SFSWAP-201ENST00000261674 VKORC1Q9BQB6 163 aa11.54□□□□□ -0.56
SFSWAP-201ENST00000261674 C2orf70A6NJV1 201 aa11.54□□□□□ -0.56
SFSWAP-201ENST00000261674 VSTM5A8MXK1 200 aa11.54□□□□□ -0.56
SFSWAP-201ENST00000261674 THBDP07204 575 aa11.54□□□□□ -0.56
SFSWAP-201ENST00000261674 GAGE1Q13065 139 aa11.54□□□□□ -0.56
SFSWAP-201ENST00000261674 LY6HO94772 140 aa11.54□□□□□ -0.56
SFSWAP-201ENST00000261674 KLF17Q5JT82 389 aaPredicted RBP11.54□□□□□ -0.56
SFSWAP-201ENST00000261674 OR8B3Q8NGG8 313 aa11.54□□□□□ -0.56
SFSWAP-201ENST00000261674 RNASE6Q93091 150 aaKnown RBP11.54□□□□□ -0.56
SFSWAP-201ENST00000261674 CCL25O15444 150 aa11.53□□□□□ -0.56
SFSWAP-201ENST00000261674 TMEM30BQ3MIR4 351 aa11.53□□□□□ -0.56
SFSWAP-201ENST00000261674 MPV17L2Q567V2 206 aa11.53□□□□□ -0.56
SFSWAP-201ENST00000261674 THAP8Q8NA92 274 aa11.53□□□□□ -0.56
SFSWAP-201ENST00000261674 URB1-AS1Q96HZ7 61 aa11.53□□□□□ -0.56
SFSWAP-201ENST00000261674 RASL11BQ9BPW5 248 aa11.53□□□□□ -0.56
SFSWAP-201ENST00000261674 SERTM2A0A1B0GWG4 89 aa11.53□□□□□ -0.56
SFSWAP-201ENST00000261674 FSTL3O95633 263 aa11.53□□□□□ -0.56
SFSWAP-201ENST00000261674 LGALS7P47929 136 aa11.53□□□□□ -0.56
SFSWAP-201ENST00000261674 MRPL52Q86TS9 123 aaKnown RBP11.53□□□□□ -0.56
SFSWAP-201ENST00000261674 WIPF2Q8TF74 440 aaPredicted RBP11.53□□□□□ -0.56
SFSWAP-201ENST00000261674 SELENOKQ9Y6D0 94 aa11.53□□□□□ -0.56
SFSWAP-201ENST00000261674 DOPEY2Q9Y3R5 2298 aa11.53□□□□□ -0.56
SFSWAP-201ENST00000261674 HSBP1L1C9JCN9 74 aa11.52□□□□□ -0.56
SFSWAP-201ENST00000261674 NUDT3O95989 172 aa11.52□□□□□ -0.56
SFSWAP-201ENST00000261674 LINC00614P0C842 121 aa11.52□□□□□ -0.56
SFSWAP-201ENST00000261674 RBPMS2Q6ZRY4 209 aaKnown RBP11.52□□□□□ -0.56
SFSWAP-201ENST00000261674 PPP1R27Q86WC6 154 aa11.52□□□□□ -0.56
SFSWAP-201ENST00000261674 RPEQ96AT9 228 aa11.52□□□□□ -0.56
SFSWAP-201ENST00000261674 RBM14Q96PK6 669 aaKnown RBP11.52□□□□□ -0.56
SFSWAP-201ENST00000261674 HELZ2Q9BYK8 2649 aaKnown RBP11.52□□□□□ -0.56
SFSWAP-201ENST00000261674 IGHV1-24A0A0C4DH33 117 aa11.52□□□□□ -0.57
SFSWAP-201ENST00000261674 LOC389332A0A1B0GUA5 103 aa11.52□□□□□ -0.57
SFSWAP-201ENST00000261674 RASL11AQ6T310 242 aa11.52□□□□□ -0.57
SFSWAP-201ENST00000261674 ZNF738Q8NE65 137 aa11.52□□□□□ -0.57
SFSWAP-201ENST00000261674 TMEM133Q9H2Q1 129 aa11.52□□□□□ -0.57
SFSWAP-201ENST00000261674 SIGLEC9Q9Y336 463 aa11.52□□□□□ -0.57
SFSWAP-201ENST00000261674 HILPDAQ9Y5L2 63 aa11.52□□□□□ -0.57
SFSWAP-201ENST00000261674 CBY3A6NI87 242 aa11.52□□□□□ -0.57
SFSWAP-201ENST00000261674 M0R3E3 92 aa11.52□□□□□ -0.57
SFSWAP-201ENST00000261674 NUP37Q8NFH4 326 aa11.52□□□□□ -0.57
SFSWAP-201ENST00000261674 OR4A5Q8NH83 315 aa11.52□□□□□ -0.57
SFSWAP-201ENST00000261674 FXYD7P58549 80 aa11.51□□□□□ -0.57
SFSWAP-201ENST00000261674 C8orf46Q8TAG6 207 aa11.51□□□□□ -0.57
SFSWAP-201ENST00000261674 C7orf69Q9H7B7 122 aa11.51□□□□□ -0.57
SFSWAP-201ENST00000261674 RNF24Q9Y225 148 aa11.51□□□□□ -0.57
SFSWAP-201ENST00000261674 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.51□□□□□ -0.57
SFSWAP-201ENST00000261674 MYCNOSP40205 109 aa11.51□□□□□ -0.57
SFSWAP-201ENST00000261674 RNF151Q2KHN1 245 aa11.51□□□□□ -0.57
SFSWAP-201ENST00000261674 FMC1Q96HJ9 113 aa11.51□□□□□ -0.57
SFSWAP-201ENST00000261674 TMUB1Q9BVT8 246 aa11.51□□□□□ -0.57
SFSWAP-201ENST00000261674 SLC25A39Q9BZJ4 359 aaPredicted RBP11.51□□□□□ -0.57
SFSWAP-201ENST00000261674 IGHV3OR16-8A0A075B7F1 116 aa11.5□□□□□ -0.57
SFSWAP-201ENST00000261674 SYS1-DBNDD2H3BUS1 97 aa11.5□□□□□ -0.57
SFSWAP-201ENST00000261674 OR2J3O76001 311 aa11.5□□□□□ -0.57
SFSWAP-201ENST00000261674 TOMM40O96008 361 aa11.5□□□□□ -0.57
SFSWAP-201ENST00000261674 GP9P14770 177 aa11.5□□□□□ -0.57
SFSWAP-201ENST00000261674 HES1Q14469 280 aa11.5□□□□□ -0.57
SFSWAP-201ENST00000261674 TRGV9Q99603 122 aa11.5□□□□□ -0.57
SFSWAP-201ENST00000261674 MLST8Q9BVC4 326 aa11.5□□□□□ -0.57
SFSWAP-201ENST00000261674 CBY1Q9Y3M2 126 aa11.5□□□□□ -0.57
SFSWAP-201ENST00000261674 CCDC168Q8NDH2 2452 aa11.5□□□□□ -0.57
SFSWAP-201ENST00000261674 IGHV2-26A0A0B4J1V2 119 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms