RNA–Protein interactions for RNA: ENST00000261439.8

TBC1D1-201, Transcript of TBC1 domain family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TBC1D1, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D1-201ENST00000261439 TRAV40A0A0B4J280 105 aa11.89□□□□□ -0.51
TBC1D1-201ENST00000261439 C14orf178Q8N769 122 aaPredicted RBP11.89□□□□□ -0.51
TBC1D1-201ENST00000261439 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.89□□□□□ -0.51
TBC1D1-201ENST00000261439 TRAV41A0A0B4J266 112 aa11.89□□□□□ -0.51
TBC1D1-201ENST00000261439 HIST1H4AP62805 103 aaKnown RBP11.89□□□□□ -0.51
TBC1D1-201ENST00000261439 C3orf36Q3SXR2 165 aa11.89□□□□□ -0.51
TBC1D1-201ENST00000261439 LINC01559Q495D7 138 aa11.89□□□□□ -0.51
TBC1D1-201ENST00000261439 MORN3Q6PF18 240 aaPredicted RBP11.89□□□□□ -0.51
TBC1D1-201ENST00000261439 SRRM4A7MD48 611 aaKnown RBP11.89□□□□□ -0.51
TBC1D1-201ENST00000261439 E9PLN8 166 aa11.89□□□□□ -0.51
TBC1D1-201ENST00000261439 LRRK1Q38SD2 2015 aa11.89□□□□□ -0.51
TBC1D1-201ENST00000261439 C2orf82Q6UX34 121 aa11.89□□□□□ -0.51
TBC1D1-201ENST00000261439 TMEM105Q8N8V8 129 aa11.89□□□□□ -0.51
TBC1D1-201ENST00000261439 ADAMTSL5Q6ZMM2 481 aa11.89□□□□□ -0.51
TBC1D1-201ENST00000261439 CHAC1Q9BUX1 264 aa11.89□□□□□ -0.51
TBC1D1-201ENST00000261439 SNHG12Q9BXW3 62 aa11.89□□□□□ -0.51
TBC1D1-201ENST00000261439 CD5LO43866 347 aa11.88□□□□□ -0.51
TBC1D1-201ENST00000261439 HS3ST6Q96QI5 342 aa11.88□□□□□ -0.51
TBC1D1-201ENST00000261439 TRBV6-6A0A0A6YYG2 114 aa11.88□□□□□ -0.51
TBC1D1-201ENST00000261439 CRIPAKQ8N1N5 446 aa11.88□□□□□ -0.51
TBC1D1-201ENST00000261439 CSTL1Q9H114 145 aa11.88□□□□□ -0.51
TBC1D1-201ENST00000261439 DOPEY2Q9Y3R5 2298 aa11.88□□□□□ -0.51
TBC1D1-201ENST00000261439 WNT2P09544 360 aa11.87□□□□□ -0.51
TBC1D1-201ENST00000261439 ZNF672Q499Z4 452 aaPredicted RBP11.87□□□□□ -0.51
TBC1D1-201ENST00000261439 PRSS22Q9GZN4 317 aa11.87□□□□□ -0.51
TBC1D1-201ENST00000261439 CRPP02741 224 aa11.87□□□□□ -0.51
TBC1D1-201ENST00000261439 FHL1Q13642 323 aa11.87□□□□□ -0.51
TBC1D1-201ENST00000261439 VMO1Q7Z5L0 202 aa11.87□□□□□ -0.51
TBC1D1-201ENST00000261439 TMEM86BQ8N661 226 aa11.87□□□□□ -0.51
TBC1D1-201ENST00000261439 DPH3P1Q9H4G8 78 aa11.87□□□□□ -0.51
TBC1D1-201ENST00000261439 TNFRSF6BO95407 300 aa11.87□□□□□ -0.51
TBC1D1-201ENST00000261439 MAJINQ3KP22 176 aa11.87□□□□□ -0.51
TBC1D1-201ENST00000261439 TOMM40O96008 361 aa11.87□□□□□ -0.51
TBC1D1-201ENST00000261439 Q0VFX4 171 aa11.87□□□□□ -0.51
TBC1D1-201ENST00000261439 S100A7L2Q5SY68 101 aa11.87□□□□□ -0.51
TBC1D1-201ENST00000261439 MRPL52Q86TS9 123 aaKnown RBP11.87□□□□□ -0.51
TBC1D1-201ENST00000261439 IGKV1D-17A0A075B6S4 117 aa11.86□□□□□ -0.51
TBC1D1-201ENST00000261439 IGKV1-16P04430 117 aa11.86□□□□□ -0.51
TBC1D1-201ENST00000261439 ARMS2P0C7Q2 107 aa11.86□□□□□ -0.51
TBC1D1-201ENST00000261439 ZNF688P0C7X2 276 aa11.86□□□□□ -0.51
TBC1D1-201ENST00000261439 RNASE2P10153 161 aaKnown RBP11.86□□□□□ -0.51
TBC1D1-201ENST00000261439 SSBP2P81877 361 aaPredicted RBP11.86□□□□□ -0.51
TBC1D1-201ENST00000261439 PLEKHB2Q96CS7 222 aa11.86□□□□□ -0.51
TBC1D1-201ENST00000261439 RCHY1Q96PM5 261 aa11.86□□□□□ -0.51
TBC1D1-201ENST00000261439 TMEM178BH3BS89 294 aa11.86□□□□□ -0.51
TBC1D1-201ENST00000261439 PFN1P07737 140 aaKnown RBP11.86□□□□□ -0.51
TBC1D1-201ENST00000261439 TRIOBPQ9H2D6 2365 aa11.86□□□□□ -0.51
TBC1D1-201ENST00000261439 PAX4O43316 350 aa11.86□□□□□ -0.51
TBC1D1-201ENST00000261439 PLSCR4Q9NRQ2 329 aa11.86□□□□□ -0.51
TBC1D1-201ENST00000261439 POLEQ07864 2286 aa11.86□□□□□ -0.51
TBC1D1-201ENST00000261439 TRAV8-3A0A0A6YYJ7 113 aa11.86□□□□□ -0.51
TBC1D1-201ENST00000261439 SPINK8P0C7L1 97 aa11.86□□□□□ -0.51
TBC1D1-201ENST00000261439 Q86TA4 180 aa11.86□□□□□ -0.51
TBC1D1-201ENST00000261439 CYYR1Q96J86 154 aa11.86□□□□□ -0.51
TBC1D1-201ENST00000261439 GAFA1Q96PS6 74 aa11.86□□□□□ -0.51
TBC1D1-201ENST00000261439 TEX43Q6ZNM6 134 aa11.85□□□□□ -0.51
TBC1D1-201ENST00000261439 KIAA2026Q5HYC2 2103 aa11.85□□□□□ -0.51
TBC1D1-201ENST00000261439 LINC01549A6NIU2 74 aa11.85□□□□□ -0.51
TBC1D1-201ENST00000261439 Q0VG73 95 aa11.85□□□□□ -0.51
TBC1D1-201ENST00000261439 ERCC8Q13216 396 aa11.85□□□□□ -0.51
TBC1D1-201ENST00000261439 PHLDA1Q8WV24 401 aaPredicted RBP11.85□□□□□ -0.51
TBC1D1-201ENST00000261439 IGKV1-6A0A0C4DH72 117 aa11.85□□□□□ -0.51
TBC1D1-201ENST00000261439 NTN3O00634 580 aaPredicted RBP11.85□□□□□ -0.51
TBC1D1-201ENST00000261439 INTS1Q8N201 2190 aaKnown RBP11.85□□□□□ -0.51
TBC1D1-201ENST00000261439 FAM231BA6NCW3 169 aa11.85□□□□□ -0.51
TBC1D1-201ENST00000261439 FCN3O75636 299 aa11.85□□□□□ -0.51
TBC1D1-201ENST00000261439 GHRHP01286 108 aa11.85□□□□□ -0.51
TBC1D1-201ENST00000261439 C18orf32Q8TCD1 76 aa11.85□□□□□ -0.51
TBC1D1-201ENST00000261439 A0A087WWL8 130 aa11.84□□□□□ -0.51
TBC1D1-201ENST00000261439 VCYO14598 125 aa11.84□□□□□ -0.51
TBC1D1-201ENST00000261439 Q6ZS49 121 aa11.84□□□□□ -0.51
TBC1D1-201ENST00000261439 C20orf144Q9BQM9 153 aa11.84□□□□□ -0.51
TBC1D1-201ENST00000261439 ZNRD1Q9P1U0 126 aa11.84□□□□□ -0.51
TBC1D1-201ENST00000261439 SIGLEC9Q9Y336 463 aa11.84□□□□□ -0.51
TBC1D1-201ENST00000261439 XIRP1Q702N8 1843 aaKnown RBP11.84□□□□□ -0.51
TBC1D1-201ENST00000261439 ZNF625Q96I27 306 aaPredicted RBP11.84□□□□□ -0.51
TBC1D1-201ENST00000261439 ZNF48Q96MX3 618 aaPredicted RBP11.84□□□□□ -0.51
TBC1D1-201ENST00000261439 SPTBN1Q01082 2364 aaKnown RBP11.84□□□□□ -0.51
TBC1D1-201ENST00000261439 IGHV3-53P01767 116 aa11.84□□□□□ -0.51
TBC1D1-201ENST00000261439 TMEM213A2RRL7 107 aa11.84□□□□□ -0.51
TBC1D1-201ENST00000261439 CST9LQ9H4G1 147 aa11.84□□□□□ -0.51
TBC1D1-201ENST00000261439 C9JAW5 83 aa11.83□□□□□ -0.51
TBC1D1-201ENST00000261439 NPSP0C0P6 89 aa11.83□□□□□ -0.51
TBC1D1-201ENST00000261439 ZNF415Q09FC8 603 aa11.83□□□□□ -0.51
TBC1D1-201ENST00000261439 IGHV2-70P01814 119 aa11.83□□□□□ -0.52
TBC1D1-201ENST00000261439 CFHR2P36980 270 aa11.83□□□□□ -0.52
TBC1D1-201ENST00000261439 C5orf64Q2M2E5 130 aa11.83□□□□□ -0.52
TBC1D1-201ENST00000261439 ZNF562Q6V9R5 426 aa11.83□□□□□ -0.52
TBC1D1-201ENST00000261439 JPT2Q9H910 190 aa11.83□□□□□ -0.52
TBC1D1-201ENST00000261439 SPXQ9BT56 116 aa11.83□□□□□ -0.52
TBC1D1-201ENST00000261439 EDA2RQ9HAV5 297 aa11.83□□□□□ -0.52
TBC1D1-201ENST00000261439 FER1L5A0AVI2 2057 aa11.83□□□□□ -0.52
TBC1D1-201ENST00000261439 BUB1B-PAK6H3BSN5 160 aa11.82□□□□□ -0.52
TBC1D1-201ENST00000261439 LGALS1P09382 135 aaKnown RBP11.82□□□□□ -0.52
TBC1D1-201ENST00000261439 DOCK6Q96HP0 2047 aa11.82□□□□□ -0.52
TBC1D1-201ENST00000261439 ABCA1O95477 2261 aa11.82□□□□□ -0.52
TBC1D1-201ENST00000261439 C9orf139Q6ZV77 190 aa11.82□□□□□ -0.52
TBC1D1-201ENST00000261439 Q6ZWC4 215 aa11.82□□□□□ -0.52
TBC1D1-201ENST00000261439 C1orf159Q96HA4 380 aa11.82□□□□□ -0.52
TBC1D1-201ENST00000261439 LIME1Q9H400 295 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms