RNA–Protein interactions for RNA: ENST00000261205.8

SYT1-201, Transcript of synaptotagmin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYT1, Length 4,808 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-201ENST00000261205 SPRNQ5BIV9 151 aa12.7□□□□□ -0.38
SYT1-201ENST00000261205 PRELID3AQ96N28 172 aa12.7□□□□□ -0.38
SYT1-201ENST00000261205 TMEM70Q9BUB7 260 aa12.7□□□□□ -0.38
SYT1-201ENST00000261205 AP5S1Q9NUS5 200 aa12.7□□□□□ -0.38
SYT1-201ENST00000261205 LYRM7Q5U5X0 104 aa12.69□□□□□ -0.38
SYT1-201ENST00000261205 A0A087X0M5 115 aa12.69□□□□□ -0.38
SYT1-201ENST00000261205 A0A1B0GX30 115 aa12.69□□□□□ -0.38
SYT1-201ENST00000261205 LCN12Q6JVE5 192 aa12.69□□□□□ -0.38
SYT1-201ENST00000261205 SCGB1D4Q6XE38 83 aa12.69□□□□□ -0.38
SYT1-201ENST00000261205 LINC01549A6NIU2 74 aa12.69□□□□□ -0.38
SYT1-201ENST00000261205 SYNJ2BPP57105 145 aa12.69□□□□□ -0.38
SYT1-201ENST00000261205 WT1-ASQ06250 92 aa12.69□□□□□ -0.38
SYT1-201ENST00000261205 PSG3Q16557 428 aa12.69□□□□□ -0.38
SYT1-201ENST00000261205 ATP5L2Q7Z4Y8 100 aa12.69□□□□□ -0.38
SYT1-201ENST00000261205 ORMDL3Q8N138 153 aa12.69□□□□□ -0.38
SYT1-201ENST00000261205 ZNF843Q8N446 348 aa12.69□□□□□ -0.38
SYT1-201ENST00000261205 PLCE1Q9P212 2302 aa12.69□□□□□ -0.38
SYT1-201ENST00000261205 HIGD1CA8MV81 97 aa12.69□□□□□ -0.38
SYT1-201ENST00000261205 G3V318 75 aa12.69□□□□□ -0.38
SYT1-201ENST00000261205 HOXA3O43365 443 aaPredicted RBP12.69□□□□□ -0.38
SYT1-201ENST00000261205 PAX9P55771 341 aa12.69□□□□□ -0.38
SYT1-201ENST00000261205 SLC17A3O00476 420 aa12.68□□□□□ -0.38
SYT1-201ENST00000261205 SPATA31B1PQ5VZV4 182 aa12.68□□□□□ -0.38
SYT1-201ENST00000261205 TSKUQ8WUA8 353 aa12.68□□□□□ -0.38
SYT1-201ENST00000261205 PRSS57Q6UWY2 283 aa12.68□□□□□ -0.38
SYT1-201ENST00000261205 OCC1Q8TAD7 63 aa12.68□□□□□ -0.38
SYT1-201ENST00000261205 FREM1Q5H8C1 2179 aa12.68□□□□□ -0.38
SYT1-201ENST00000261205 ZNF688P0C7X2 276 aa12.68□□□□□ -0.38
SYT1-201ENST00000261205 MRPL27Q9P0M9 148 aaKnown RBP12.68□□□□□ -0.38
SYT1-201ENST00000261205 GRIFINA4D1Z8 144 aa12.67□□□□□ -0.38
SYT1-201ENST00000261205 Q1RN00 199 aa12.67□□□□□ -0.38
SYT1-201ENST00000261205 DIRC3C9JPN6 131 aa12.67□□□□□ -0.38
SYT1-201ENST00000261205 THAP8Q8NA92 274 aa12.67□□□□□ -0.38
SYT1-201ENST00000261205 GLMPQ8WWB7 406 aa12.67□□□□□ -0.38
SYT1-201ENST00000261205 TMEM101Q96IK0 257 aa12.67□□□□□ -0.38
SYT1-201ENST00000261205 MDKP21741 143 aaPredicted RBP12.67□□□□□ -0.38
SYT1-201ENST00000261205 MSMPQ1L6U9 139 aa12.67□□□□□ -0.38
SYT1-201ENST00000261205 ATP5LO75964 103 aa12.67□□□□□ -0.38
SYT1-201ENST00000261205 SRRM4A7MD48 611 aaKnown RBP12.66□□□□□ -0.38
SYT1-201ENST00000261205 FOLR2P14207 255 aa12.66□□□□□ -0.38
SYT1-201ENST00000261205 MLANAQ16655 118 aa12.66□□□□□ -0.38
SYT1-201ENST00000261205 DIAPH2-AS1Q14236 149 aa12.66□□□□□ -0.38
SYT1-201ENST00000261205 TMEM14CQ9P0S9 112 aa12.66□□□□□ -0.38
SYT1-201ENST00000261205 CBLN1P23435 193 aa12.65□□□□□ -0.38
SYT1-201ENST00000261205 IGLV1-47P01700 117 aa12.65□□□□□ -0.38
SYT1-201ENST00000261205 MUC21Q5SSG8 566 aa12.65□□□□□ -0.38
SYT1-201ENST00000261205 EXOC3-AS1Q8N2X6 119 aa12.65□□□□□ -0.38
SYT1-201ENST00000261205 HSPB9Q9BQS6 159 aa12.65□□□□□ -0.38
SYT1-201ENST00000261205 SPG11Q96JI7 2443 aa12.65□□□□□ -0.38
SYT1-201ENST00000261205 C1QL4Q86Z23 238 aa12.65□□□□□ -0.38
SYT1-201ENST00000261205 TBX15Q96SF7 602 aa12.65□□□□□ -0.38
SYT1-201ENST00000261205 PRDM13Q9H4Q3 707 aa12.65□□□□□ -0.38
SYT1-201ENST00000261205 INSP01308 110 aa12.65□□□□□ -0.38
SYT1-201ENST00000261205 NDPQ00604 133 aa12.65□□□□□ -0.38
SYT1-201ENST00000261205 ATP6V0BQ99437 205 aa12.65□□□□□ -0.38
SYT1-201ENST00000261205 TMEM86BQ8N661 226 aa12.64□□□□□ -0.39
SYT1-201ENST00000261205 IGHV4-59P01825 116 aa12.64□□□□□ -0.39
SYT1-201ENST00000261205 ZNF415Q09FC8 603 aa12.64□□□□□ -0.39
SYT1-201ENST00000261205 FOXE3Q13461 319 aa12.64□□□□□ -0.39
SYT1-201ENST00000261205 MST1LQ2TV78 715 aa12.64□□□□□ -0.39
SYT1-201ENST00000261205 RASL11AQ6T310 242 aa12.64□□□□□ -0.39
SYT1-201ENST00000261205 COPS9Q8WXC6 57 aa12.64□□□□□ -0.39
SYT1-201ENST00000261205 RNASE7Q9H1E1 156 aaKnown RBP12.64□□□□□ -0.39
SYT1-201ENST00000261205 ZNF114Q8NC26 417 aa12.64□□□□□ -0.39
SYT1-201ENST00000261205 NCOA6Q14686 2063 aaPredicted RBP12.64□□□□□ -0.39
SYT1-201ENST00000261205 KIAA1644Q3SXP7 199 aa12.64□□□□□ -0.39
SYT1-201ENST00000261205 FAM120AOSQ5T036 256 aa12.64□□□□□ -0.39
SYT1-201ENST00000261205 LINC00574Q9H8X3 128 aa12.64□□□□□ -0.39
SYT1-201ENST00000261205 TPSG1Q9NRR2 321 aa12.63□□□□□ -0.39
SYT1-201ENST00000261205 TSSC4Q9Y5U2 329 aaPredicted RBP12.63□□□□□ -0.39
SYT1-201ENST00000261205 IGKV2-40A0A087WW87 121 aaPredicted RBP12.63□□□□□ -0.39
SYT1-201ENST00000261205 TMEM89A2RUT3 159 aa12.63□□□□□ -0.39
SYT1-201ENST00000261205 IGKV2D-40P01614 121 aaPredicted RBP12.63□□□□□ -0.39
SYT1-201ENST00000261205 IL15RAQ13261 267 aa12.63□□□□□ -0.39
SYT1-201ENST00000261205 IGLC7A0M8Q6 106 aa12.63□□□□□ -0.39
SYT1-201ENST00000261205 IFITM10A6NMD0 228 aa12.63□□□□□ -0.39
SYT1-201ENST00000261205 NOTCH2Q04721 2471 aa12.63□□□□□ -0.39
SYT1-201ENST00000261205 IGLC1P0CG04 106 aa12.63□□□□□ -0.39
SYT1-201ENST00000261205 FBLN7Q53RD9 439 aa12.63□□□□□ -0.39
SYT1-201ENST00000261205 SIRPDQ9H106 197 aa12.63□□□□□ -0.39
SYT1-201ENST00000261205 GEMIN7Q9H840 131 aaKnown RBP12.63□□□□□ -0.39
SYT1-201ENST00000261205 FOXL1Q12952 345 aa12.62□□□□□ -0.39
SYT1-201ENST00000261205 FCN3O75636 299 aa12.62□□□□□ -0.39
SYT1-201ENST00000261205 NUDT10Q8NFP7 164 aa12.62□□□□□ -0.39
SYT1-201ENST00000261205 NUDT11Q96G61 164 aa12.62□□□□□ -0.39
SYT1-201ENST00000261205 ST20Q9HBF5 79 aa12.62□□□□□ -0.39
SYT1-201ENST00000261205 NXT2Q9NPJ8 142 aaKnown RBP12.62□□□□□ -0.39
SYT1-201ENST00000261205 SRSF9Q13242 221 aaKnown RBP eCLIP12.62□□□□□ -0.39
SYT1-201ENST00000261205 GNB1LQ9BYB4 327 aa12.62□□□□□ -0.39
SYT1-201ENST00000261205 TMEM183AQ8IXX5 376 aa12.61□□□□□ -0.39
SYT1-201ENST00000261205 OR11H1Q8NG94 326 aa12.61□□□□□ -0.39
SYT1-201ENST00000261205 OR10J3Q5JRS4 329 aa12.61□□□□□ -0.39
SYT1-201ENST00000261205 MIEN1Q9BRT3 115 aa12.61□□□□□ -0.39
SYT1-201ENST00000261205 IGHV4-38-2P0DP08 117 aa12.61□□□□□ -0.39
SYT1-201ENST00000261205 CDX1P47902 265 aaPredicted RBP12.61□□□□□ -0.39
SYT1-201ENST00000261205 ACTL10Q5JWF8 245 aa12.61□□□□□ -0.39
SYT1-201ENST00000261205 LINC01551Q86U37 167 aa12.61□□□□□ -0.39
SYT1-201ENST00000261205 TRGV4A0A0C4DH28 118 aa12.6□□□□□ -0.39
SYT1-201ENST00000261205 INS-IGF2F8WCM5 200 aa12.6□□□□□ -0.39
SYT1-201ENST00000261205 H3BRN7 92 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms