RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 SYNJ2BPP57105 145 aa9.84□□□□□ -0.83
COL8A1-201ENST00000261037 RPL36AP83881 106 aaKnown RBP9.84□□□□□ -0.83
COL8A1-201ENST00000261037 MORN3Q6PF18 240 aaPredicted RBP9.84□□□□□ -0.83
COL8A1-201ENST00000261037 RPL36ALQ969Q0 106 aaKnown RBP9.84□□□□□ -0.83
COL8A1-201ENST00000261037 C1orf159Q96HA4 380 aa9.84□□□□□ -0.83
COL8A1-201ENST00000261037 NDUFAF3Q9BU61 184 aa9.84□□□□□ -0.83
COL8A1-201ENST00000261037 AMBPP02760 352 aa9.84□□□□□ -0.83
COL8A1-201ENST00000261037 DEFB130BP0DP73 79 aa9.84□□□□□ -0.83
COL8A1-201ENST00000261037 DEFB130AP0DP74 79 aa9.84□□□□□ -0.83
COL8A1-201ENST00000261037 SPSB3Q6PJ21 355 aa9.84□□□□□ -0.83
COL8A1-201ENST00000261037 LINC01551Q86U37 167 aa9.84□□□□□ -0.83
COL8A1-201ENST00000261037 RHPN1-AS1Q9BWJ2 59 aa9.84□□□□□ -0.83
COL8A1-201ENST00000261037 VWA8A3KMH1 1905 aa9.84□□□□□ -0.83
COL8A1-201ENST00000261037 E7EQL1 145 aa9.84□□□□□ -0.83
COL8A1-201ENST00000261037 PRTN3P24158 256 aa9.84□□□□□ -0.83
COL8A1-201ENST00000261037 LINC01356Q8N9X3 169 aa9.84□□□□□ -0.83
COL8A1-201ENST00000261037 AHCTF1Q8WYP5 2266 aa9.84□□□□□ -0.83
COL8A1-201ENST00000261037 TRAV13-1A0A0B4J241 112 aa9.83□□□□□ -0.84
COL8A1-201ENST00000261037 TOMM40O96008 361 aa9.83□□□□□ -0.84
COL8A1-201ENST00000261037 IGKV1-16P04430 117 aa9.83□□□□□ -0.84
COL8A1-201ENST00000261037 ATXN8Q156A1 80 aa9.83□□□□□ -0.84
COL8A1-201ENST00000261037 HS3ST6Q96QI5 342 aa9.83□□□□□ -0.84
COL8A1-201ENST00000261037 MSRB2Q9Y3D2 182 aa9.83□□□□□ -0.84
COL8A1-201ENST00000261037 THADAQ6YHU6 1953 aa9.83□□□□□ -0.84
COL8A1-201ENST00000261037 INSP01308 110 aa9.83□□□□□ -0.84
COL8A1-201ENST00000261037 HSD52Q0P140 79 aa9.83□□□□□ -0.84
COL8A1-201ENST00000261037 GUSBP1Q15486 140 aa9.83□□□□□ -0.84
COL8A1-201ENST00000261037 C17orf82Q86X59 251 aaPredicted RBP9.83□□□□□ -0.84
COL8A1-201ENST00000261037 MBD3L4A6NDZ8 208 aaPredicted RBP9.83□□□□□ -0.84
COL8A1-201ENST00000261037 MBD3L3A6NE82 208 aaPredicted RBP9.83□□□□□ -0.84
COL8A1-201ENST00000261037 MBD3L5A6NJ08 208 aaPredicted RBP9.83□□□□□ -0.84
COL8A1-201ENST00000261037 FAM223BA6NKX1 122 aa9.83□□□□□ -0.84
COL8A1-201ENST00000261037 A8MWV9 139 aa9.83□□□□□ -0.84
COL8A1-201ENST00000261037 OVOL3O00110 214 aa9.83□□□□□ -0.84
COL8A1-201ENST00000261037 C1orf122Q6ZSJ8 110 aa9.83□□□□□ -0.84
COL8A1-201ENST00000261037 FAM223AQ8IWN6 122 aa9.83□□□□□ -0.84
COL8A1-201ENST00000261037 MBD3L2Q8NHZ7 208 aaPredicted RBP9.83□□□□□ -0.84
COL8A1-201ENST00000261037 TMEM158Q8WZ71 300 aa9.83□□□□□ -0.84
COL8A1-201ENST00000261037 C9orf139Q6ZV77 190 aa9.83□□□□□ -0.84
COL8A1-201ENST00000261037 TMEM256Q8N2U0 113 aa9.83□□□□□ -0.84
COL8A1-201ENST00000261037 TMEM14EPQ6UXP3 125 aa9.82□□□□□ -0.84
COL8A1-201ENST00000261037 LINC00477Q96M19 166 aa9.82□□□□□ -0.84
COL8A1-201ENST00000261037 TMEM238C9JI98 176 aa9.82□□□□□ -0.84
COL8A1-201ENST00000261037 RPRMLQ8N4K4 120 aa9.82□□□□□ -0.84
COL8A1-201ENST00000261037 C8orf49Q96NF6 230 aa9.82□□□□□ -0.84
COL8A1-201ENST00000261037 ANAPC13Q9BS18 74 aa9.82□□□□□ -0.84
COL8A1-201ENST00000261037 LAMTOR3Q9UHA4 124 aa9.82□□□□□ -0.84
COL8A1-201ENST00000261037 A0A087X0K7 114 aa9.82□□□□□ -0.84
COL8A1-201ENST00000261037 C15orf62A8K5M9 175 aa9.82□□□□□ -0.84
COL8A1-201ENST00000261037 ZNF625Q96I27 306 aaPredicted RBP9.82□□□□□ -0.84
COL8A1-201ENST00000261037 RALGAPA1Q6GYQ0 2036 aa9.82□□□□□ -0.84
COL8A1-201ENST00000261037 KNCNA6PVL3 124 aa9.82□□□□□ -0.84
COL8A1-201ENST00000261037 DKK1O94907 266 aa9.82□□□□□ -0.84
COL8A1-201ENST00000261037 HIST1H4AP62805 103 aaKnown RBP9.82□□□□□ -0.84
COL8A1-201ENST00000261037 Q71RC1 249 aaPredicted RBP9.82□□□□□ -0.84
COL8A1-201ENST00000261037 SNRNP200O75643 2136 aaKnown RBP9.82□□□□□ -0.84
COL8A1-201ENST00000261037 COLCA2A8K830 154 aa9.81□□□□□ -0.84
COL8A1-201ENST00000261037 QRFPP83859 136 aa9.81□□□□□ -0.84
COL8A1-201ENST00000261037 AMN1Q8IY45 258 aa9.81□□□□□ -0.84
COL8A1-201ENST00000261037 CMC4P56277 68 aaPredicted RBP9.81□□□□□ -0.84
COL8A1-201ENST00000261037 GAGE13Q4V321 117 aa9.81□□□□□ -0.84
COL8A1-201ENST00000261037 LINC00479Q96M42 142 aa9.81□□□□□ -0.84
COL8A1-201ENST00000261037 RNASE2P10153 161 aaKnown RBP9.81□□□□□ -0.84
COL8A1-201ENST00000261037 SP5Q6BEB4 398 aaPredicted RBP9.81□□□□□ -0.84
COL8A1-201ENST00000261037 BCL6BQ8N143 479 aaPredicted RBP9.81□□□□□ -0.84
COL8A1-201ENST00000261037 IGHV3-16A0A0C4DH30 117 aa9.81□□□□□ -0.84
COL8A1-201ENST00000261037 INS-IGF2F8WCM5 200 aa9.81□□□□□ -0.84
COL8A1-201ENST00000261037 IL17RELQ6ZVW7 336 aa9.81□□□□□ -0.84
COL8A1-201ENST00000261037 RASL10AQ92737 203 aa9.81□□□□□ -0.84
COL8A1-201ENST00000261037 GHRHP01286 108 aa9.81□□□□□ -0.84
COL8A1-201ENST00000261037 PLXNA3P51805 1871 aa9.81□□□□□ -0.84
COL8A1-201ENST00000261037 FAM90A2PQ658T7 463 aa9.81□□□□□ -0.84
COL8A1-201ENST00000261037 RNF5Q99942 180 aa9.81□□□□□ -0.84
COL8A1-201ENST00000261037 SPXQ9BT56 116 aa9.81□□□□□ -0.84
COL8A1-201ENST00000261037 KLK9Q9UKQ9 250 aa9.81□□□□□ -0.84
COL8A1-201ENST00000261037 DEFB131AP59861 70 aa9.8□□□□□ -0.84
COL8A1-201ENST00000261037 OOSP1A8MZH6 123 aa9.8□□□□□ -0.84
COL8A1-201ENST00000261037 C6orf226Q5I0X4 101 aa9.8□□□□□ -0.84
COL8A1-201ENST00000261037 USMG5Q96IX5 58 aa9.8□□□□□ -0.84
COL8A1-201ENST00000261037 VCYO14598 125 aa9.8□□□□□ -0.84
COL8A1-201ENST00000261037 ATP6V0E1O15342 81 aa9.8□□□□□ -0.84
COL8A1-201ENST00000261037 DUX4L9Q6RFH8 374 aaPredicted RBP9.8□□□□□ -0.84
COL8A1-201ENST00000261037 CACNA1IQ9P0X4 2223 aa9.79□□□□□ -0.84
COL8A1-201ENST00000261037 CDK2AP2O75956 126 aa9.79□□□□□ -0.84
COL8A1-201ENST00000261037 SMPXQ9UHP9 88 aa9.79□□□□□ -0.84
COL8A1-201ENST00000261037 Q86TA4 180 aa9.79□□□□□ -0.84
COL8A1-201ENST00000261037 TMEM242Q9NWH2 141 aa9.79□□□□□ -0.84
COL8A1-201ENST00000261037 PLEKHB2Q96CS7 222 aa9.79□□□□□ -0.84
COL8A1-201ENST00000261037 TNFSF13O75888 250 aa9.79□□□□□ -0.84
COL8A1-201ENST00000261037 Q6ZRM9 215 aa9.79□□□□□ -0.84
COL8A1-201ENST00000261037 XCL2Q9UBD3 114 aa9.79□□□□□ -0.84
COL8A1-201ENST00000261037 SSC4DQ8WTU2 575 aa9.79□□□□□ -0.84
COL8A1-201ENST00000261037 Q96MF0 132 aa9.79□□□□□ -0.84
COL8A1-201ENST00000261037 MS4A6AQ9H2W1 248 aa9.79□□□□□ -0.84
COL8A1-201ENST00000261037 WDR81Q562E7 1941 aa9.79□□□□□ -0.84
COL8A1-201ENST00000261037 RP1P56715 2156 aa9.78□□□□□ -0.84
COL8A1-201ENST00000261037 TRBV24-1A0A075B6N3 115 aa9.78□□□□□ -0.84
COL8A1-201ENST00000261037 C3orf56Q8N813 242 aa9.78□□□□□ -0.84
COL8A1-201ENST00000261037 IGHG3P01860 377 aa9.78□□□□□ -0.84
COL8A1-201ENST00000261037 Q6ZS92 163 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms