RNA–Protein interactions for RNA: ENST00000259883.3

PGBD1-201, Transcript of piggyBac transposable element derived 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGBD1, Length 3,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1-201ENST00000259883 PNKDQ8N490 385 aa10.56□□□□□ -0.72
PGBD1-201ENST00000259883 HIGD1AQ9Y241 93 aa10.56□□□□□ -0.72
PGBD1-201ENST00000259883 A0A0G2JNJ9 132 aa10.56□□□□□ -0.72
PGBD1-201ENST00000259883 FBLN7Q53RD9 439 aa10.56□□□□□ -0.72
PGBD1-201ENST00000259883 PRR30Q53SZ7 412 aaPredicted RBP10.56□□□□□ -0.72
PGBD1-201ENST00000259883 MRPL27Q9P0M9 148 aaKnown RBP10.56□□□□□ -0.72
PGBD1-201ENST00000259883 Q9UFV3 132 aa10.56□□□□□ -0.72
PGBD1-201ENST00000259883 TMEM178BH3BS89 294 aa10.55□□□□□ -0.72
PGBD1-201ENST00000259883 ITGB1BP1O14713 200 aa10.55□□□□□ -0.72
PGBD1-201ENST00000259883 APOHP02749 345 aaPredicted RBP10.55□□□□□ -0.72
PGBD1-201ENST00000259883 TMEM11P17152 192 aa10.55□□□□□ -0.72
PGBD1-201ENST00000259883 LOXP28300 417 aaPredicted RBP10.55□□□□□ -0.72
PGBD1-201ENST00000259883 TM4SF20Q53R12 229 aa10.55□□□□□ -0.72
PGBD1-201ENST00000259883 C5orf17Q8NAS9 161 aa10.55□□□□□ -0.72
PGBD1-201ENST00000259883 PRSS3P2Q8NHM4 247 aa10.55□□□□□ -0.72
PGBD1-201ENST00000259883 IGHV2-26A0A0B4J1V2 119 aa10.55□□□□□ -0.72
PGBD1-201ENST00000259883 FNDC10F2Z333 226 aa10.55□□□□□ -0.72
PGBD1-201ENST00000259883 FCGR2BP31994 310 aaPredicted RBP10.55□□□□□ -0.72
PGBD1-201ENST00000259883 RASL11BQ9BPW5 248 aa10.55□□□□□ -0.72
PGBD1-201ENST00000259883 ONECUT1Q9UBC0 465 aa10.55□□□□□ -0.72
PGBD1-201ENST00000259883 SMKR1H3BMG3 65 aa10.54□□□□□ -0.72
PGBD1-201ENST00000259883 OR4F17Q8NGA8 305 aa10.54□□□□□ -0.72
PGBD1-201ENST00000259883 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.54□□□□□ -0.72
PGBD1-201ENST00000259883 FSTL3O95633 263 aa10.54□□□□□ -0.72
PGBD1-201ENST00000259883 NCR2O95944 276 aa10.54□□□□□ -0.72
PGBD1-201ENST00000259883 RBPMS2Q6ZRY4 209 aaKnown RBP10.54□□□□□ -0.72
PGBD1-201ENST00000259883 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.54□□□□□ -0.723e-8■■■□□ 17.4
PGBD1-201ENST00000259883 IGHV1-8P0DP01 117 aa10.53□□□□□ -0.72
PGBD1-201ENST00000259883 LOXL1Q08397 574 aaPredicted RBP10.53□□□□□ -0.72
PGBD1-201ENST00000259883 AMMECR1LQ6DCA0 310 aa10.53□□□□□ -0.72
PGBD1-201ENST00000259883 RPEQ96AT9 228 aa10.53□□□□□ -0.72
PGBD1-201ENST00000259883 TMEM186Q96B77 213 aa10.53□□□□□ -0.72
PGBD1-201ENST00000259883 C8orf49Q96NF6 230 aa10.53□□□□□ -0.72
PGBD1-201ENST00000259883 TMEM133Q9H2Q1 129 aa10.53□□□□□ -0.72
PGBD1-201ENST00000259883 C7orf69Q9H7B7 122 aa10.53□□□□□ -0.72
PGBD1-201ENST00000259883 IGHV3OR16-13A0A075B7E8 117 aa10.53□□□□□ -0.72
PGBD1-201ENST00000259883 IGHV3-74A0A0B4J1X5 117 aa10.53□□□□□ -0.72
PGBD1-201ENST00000259883 UBE2V1Q13404 147 aa10.53□□□□□ -0.72
PGBD1-201ENST00000259883 SLC25A34Q6PIV7 304 aa10.53□□□□□ -0.72
PGBD1-201ENST00000259883 MAP1LC3CQ9BXW4 147 aa10.53□□□□□ -0.72
PGBD1-201ENST00000259883 SLC25A39Q9BZJ4 359 aaPredicted RBP10.53□□□□□ -0.72
PGBD1-201ENST00000259883 TMEM213A2RRL7 107 aa10.53□□□□□ -0.72
PGBD1-201ENST00000259883 IL4P05112 153 aa10.53□□□□□ -0.72
PGBD1-201ENST00000259883 GP9P14770 177 aa10.53□□□□□ -0.72
PGBD1-201ENST00000259883 LDLRAD2Q5SZI1 272 aa10.53□□□□□ -0.72
PGBD1-201ENST00000259883 FAM120AOSQ5T036 256 aa10.53□□□□□ -0.72
PGBD1-201ENST00000259883 FAM231DQ6ZW35 169 aa10.53□□□□□ -0.72
PGBD1-201ENST00000259883 IGFL2Q6UWQ7 119 aa10.52□□□□□ -0.72
PGBD1-201ENST00000259883 Q86TA4 180 aa10.52□□□□□ -0.72
PGBD1-201ENST00000259883 Q8TAT8 98 aa10.52□□□□□ -0.72
PGBD1-201ENST00000259883 CHRDL1Q9BU40 450 aa10.52□□□□□ -0.72
PGBD1-201ENST00000259883 A0A1B0GXF2 115 aa10.52□□□□□ -0.73
PGBD1-201ENST00000259883 PRRG2O14669 202 aa10.52□□□□□ -0.73
PGBD1-201ENST00000259883 ARF6P62330 175 aa10.52□□□□□ -0.73
PGBD1-201ENST00000259883 TEX36Q5VZQ5 186 aa10.52□□□□□ -0.73
PGBD1-201ENST00000259883 FA2HQ7L5A8 372 aa10.52□□□□□ -0.73
PGBD1-201ENST00000259883 PPP1R27Q86WC6 154 aa10.52□□□□□ -0.73
PGBD1-201ENST00000259883 RAB37Q96AX2 223 aa10.52□□□□□ -0.73
PGBD1-201ENST00000259883 C18orf15Q96N68 181 aa10.52□□□□□ -0.73
PGBD1-201ENST00000259883 VPS25Q9BRG1 176 aa10.52□□□□□ -0.73
PGBD1-201ENST00000259883 TMEM191AQ9H0A3 160 aa10.52□□□□□ -0.73
PGBD1-201ENST00000259883 SIGLEC9Q9Y336 463 aa10.52□□□□□ -0.73
PGBD1-201ENST00000259883 CREBBPQ92793 2442 aa10.52□□□□□ -0.73
PGBD1-201ENST00000259883 LOC105371242A0A075B767 164 aa10.51□□□□□ -0.73
PGBD1-201ENST00000259883 THBDP07204 575 aa10.51□□□□□ -0.73
PGBD1-201ENST00000259883 PPIFP30405 207 aaKnown RBP10.51□□□□□ -0.73
PGBD1-201ENST00000259883 KLRD1Q13241 179 aa10.51□□□□□ -0.73
PGBD1-201ENST00000259883 PRSS57Q6UWY2 283 aa10.51□□□□□ -0.73
PGBD1-201ENST00000259883 GFRALQ6UXV0 394 aa10.51□□□□□ -0.73
PGBD1-201ENST00000259883 LINC01560Q8TB33 94 aa10.51□□□□□ -0.73
PGBD1-201ENST00000259883 SPTBN4Q9H254 2564 aa10.51□□□□□ -0.73
PGBD1-201ENST00000259883 OR5AL1P0C617 328 aa10.51□□□□□ -0.73
PGBD1-201ENST00000259883 IFI27P40305 119 aaPredicted RBP10.51□□□□□ -0.73
PGBD1-201ENST00000259883 WIPF2Q8TF74 440 aaPredicted RBP10.51□□□□□ -0.73
PGBD1-201ENST00000259883 RNASE6Q93091 150 aaKnown RBP10.51□□□□□ -0.73
PGBD1-201ENST00000259883 F11RQ9Y624 299 aaKnown RBP10.51□□□□□ -0.73
PGBD1-201ENST00000259883 TOMM40O96008 361 aa10.51□□□□□ -0.73
PGBD1-201ENST00000259883 NHLH1Q02575 133 aa10.51□□□□□ -0.73
PGBD1-201ENST00000259883 TMEM75Q8N9X5 138 aa10.51□□□□□ -0.73
PGBD1-201ENST00000259883 MRPS16Q9Y3D3 137 aaKnown RBP10.51□□□□□ -0.73
PGBD1-201ENST00000259883 IGHV3-66A0A0C4DH42 116 aa10.5□□□□□ -0.73
PGBD1-201ENST00000259883 IGHV1-69-2A0A0G2JMI3 117 aa10.5□□□□□ -0.73
PGBD1-201ENST00000259883 OR2J3O76001 311 aa10.5□□□□□ -0.73
PGBD1-201ENST00000259883 MYCNOSP40205 109 aa10.5□□□□□ -0.73
PGBD1-201ENST00000259883 MEF2CQ06413 473 aaPredicted RBP10.5□□□□□ -0.73
PGBD1-201ENST00000259883 MRGPRG-AS1Q2M3A8 158 aa10.5□□□□□ -0.73
PGBD1-201ENST00000259883 THAP8Q8NA92 274 aa10.5□□□□□ -0.73
PGBD1-201ENST00000259883 STXBP6Q8NFX7 210 aa10.5□□□□□ -0.73
PGBD1-201ENST00000259883 C8orf46Q8TAG6 207 aa10.5□□□□□ -0.73
PGBD1-201ENST00000259883 ORAOV1Q8WV07 137 aa10.5□□□□□ -0.73
PGBD1-201ENST00000259883 FMC1Q96HJ9 113 aa10.5□□□□□ -0.73
PGBD1-201ENST00000259883 MLST8Q9BVC4 326 aa10.5□□□□□ -0.73
PGBD1-201ENST00000259883 AP5S1Q9NUS5 200 aa10.5□□□□□ -0.73
PGBD1-201ENST00000259883 IGKV2-40A0A087WW87 121 aaPredicted RBP10.5□□□□□ -0.73
PGBD1-201ENST00000259883 LTAP01374 205 aa10.5□□□□□ -0.73
PGBD1-201ENST00000259883 IGKV2D-40P01614 121 aaPredicted RBP10.5□□□□□ -0.73
PGBD1-201ENST00000259883 KLF5Q13887 457 aaPredicted RBP10.5□□□□□ -0.73
PGBD1-201ENST00000259883 AMN1Q8IY45 258 aa10.5□□□□□ -0.73
PGBD1-201ENST00000259883 ABHD17AQ96GS6 310 aa10.5□□□□□ -0.73
PGBD1-201ENST00000259883 IGHV1-3A0A0C4DH29 117 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms