RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 TMA7Q9Y2S6 64 aaKnown RBP13.49□□□□□ -0.25
SRSF1-201ENST00000258962 TRBV7-1A0A0A6YYK4 115 aa13.49□□□□□ -0.25
SRSF1-201ENST00000258962 TPPP2P59282 170 aa13.49□□□□□ -0.25
SRSF1-201ENST00000258962 UBE2L3P68036 154 aaKnown RBP13.49□□□□□ -0.25
SRSF1-201ENST00000258962 TMEM241Q24JQ0 296 aa13.49□□□□□ -0.25
SRSF1-201ENST00000258962 LEMD1Q68G75 181 aa13.49□□□□□ -0.25
SRSF1-201ENST00000258962 CLEC19AQ6UXS0 136 aa13.49□□□□□ -0.25
SRSF1-201ENST00000258962 C15orf54Q8N8G6 183 aa13.49□□□□□ -0.25
SRSF1-201ENST00000258962 Q8WTZ3 238 aa13.49□□□□□ -0.25
SRSF1-201ENST00000258962 FXYD5Q96DB9 178 aa13.49□□□□□ -0.25
SRSF1-201ENST00000258962 SMIM7Q9BQ49 75 aa13.49□□□□□ -0.25
SRSF1-201ENST00000258962 PAXXQ9BUH6 204 aa13.49□□□□□ -0.25
SRSF1-201ENST00000258962 SLC25A39Q9BZJ4 359 aaPredicted RBP13.49□□□□□ -0.25
SRSF1-201ENST00000258962 CLEC3BP05452 202 aa13.48□□□□□ -0.25
SRSF1-201ENST00000258962 NPPCP23582 126 aa13.48□□□□□ -0.25
SRSF1-201ENST00000258962 KLK15Q9H2R5 256 aa13.48□□□□□ -0.25
SRSF1-201ENST00000258962 OR51M1Q9H341 326 aa13.48□□□□□ -0.25
SRSF1-201ENST00000258962 H3BRN7 92 aa13.47□□□□□ -0.25
SRSF1-201ENST00000258962 NUPL2O15504 423 aaKnown RBP13.47□□□□□ -0.25
SRSF1-201ENST00000258962 TGOLN2O43493 480 aa13.47□□□□□ -0.25
SRSF1-201ENST00000258962 PF4V1P10720 104 aa13.47□□□□□ -0.25
SRSF1-201ENST00000258962 GP9P14770 177 aa13.47□□□□□ -0.25
SRSF1-201ENST00000258962 TMEM88Q6PEY1 159 aa13.47□□□□□ -0.25
SRSF1-201ENST00000258962 KLHDC1Q8N7A1 406 aa13.47□□□□□ -0.25
SRSF1-201ENST00000258962 CITED1Q99966 193 aa13.47□□□□□ -0.25
SRSF1-201ENST00000258962 SHANK2-AS3Q9BTD1 123 aa13.47□□□□□ -0.25
SRSF1-201ENST00000258962 SDF2L1Q9HCN8 221 aa13.47□□□□□ -0.25
SRSF1-201ENST00000258962 GAR1Q9NY12 217 aaKnown RBP13.47□□□□□ -0.25
SRSF1-201ENST00000258962 CXorf65A6NEN9 183 aa13.46□□□□□ -0.25
SRSF1-201ENST00000258962 ZNF600Q6ZNG1 722 aa13.46□□□□□ -0.25
SRSF1-201ENST00000258962 LCNL1Q6ZST4 164 aa13.46□□□□□ -0.25
SRSF1-201ENST00000258962 CBLN2Q8IUK8 224 aa13.46□□□□□ -0.25
SRSF1-201ENST00000258962 ATP6V0BQ99437 205 aa13.46□□□□□ -0.25
SRSF1-201ENST00000258962 C20orf24Q9BUV8 137 aa13.46□□□□□ -0.25
SRSF1-201ENST00000258962 SERTAD4Q9NUC0 356 aa13.46□□□□□ -0.25
SRSF1-201ENST00000258962 IGHG4P01861 327 aa13.45□□□□□ -0.26
SRSF1-201ENST00000258962 S100A7P31151 101 aa13.45□□□□□ -0.26
SRSF1-201ENST00000258962 KRTAP10-3P60369 221 aa13.45□□□□□ -0.26
SRSF1-201ENST00000258962 ZNF329Q86UD4 541 aa13.45□□□□□ -0.26
SRSF1-201ENST00000258962 USMG5Q96IX5 58 aa13.45□□□□□ -0.26
SRSF1-201ENST00000258962 CTDSP1Q9GZU7 261 aa13.45□□□□□ -0.26
SRSF1-201ENST00000258962 PARLQ9H300 379 aa13.45□□□□□ -0.26
SRSF1-201ENST00000258962 ZFAND3Q9H8U3 227 aa13.45□□□□□ -0.26
SRSF1-201ENST00000258962 RNF24Q9Y225 148 aa13.45□□□□□ -0.26
SRSF1-201ENST00000258962 IGHV3-35A0A0C4DH35 117 aa13.44□□□□□ -0.26
SRSF1-201ENST00000258962 A0A1W2PRE2 83 aa13.44□□□□□ -0.26
SRSF1-201ENST00000258962 GGTLC3B5MD39 225 aa13.44□□□□□ -0.26
SRSF1-201ENST00000258962 ZNF674Q2M3X9 581 aa13.44□□□□□ -0.26
SRSF1-201ENST00000258962 ZNF343Q6P1L6 599 aa13.44□□□□□ -0.26
SRSF1-201ENST00000258962 C10orf99Q6UWK7 81 aa13.44□□□□□ -0.26
SRSF1-201ENST00000258962 TMEM190Q8WZ59 177 aa13.44□□□□□ -0.26
SRSF1-201ENST00000258962 RPUSD4Q96CM3 377 aaKnown RBP13.44□□□□□ -0.26
SRSF1-201ENST00000258962 TMEM242Q9NWH2 141 aa13.44□□□□□ -0.26
SRSF1-201ENST00000258962 SCO2A0A1W2PP80 73 aa13.44□□□□□ -0.26
SRSF1-201ENST00000258962 PPP5D1E7EU14 171 aa13.44□□□□□ -0.26
SRSF1-201ENST00000258962 MT-ND4LP03901 98 aa13.44□□□□□ -0.26
SRSF1-201ENST00000258962 PSMB8P28062 276 aa13.44□□□□□ -0.26
SRSF1-201ENST00000258962 RAB9AP51151 201 aa13.44□□□□□ -0.26
SRSF1-201ENST00000258962 TOMM20LQ6UXN7 152 aa13.44□□□□□ -0.26
SRSF1-201ENST00000258962 GNB4Q9HAV0 340 aa13.44□□□□□ -0.26
SRSF1-201ENST00000258962 TMEM14CQ9P0S9 112 aa13.44□□□□□ -0.26
SRSF1-201ENST00000258962 TRBV12-3P01733 135 aa13.43□□□□□ -0.26
SRSF1-201ENST00000258962 SNRPCP09234 159 aaKnown RBP13.43□□□□□ -0.26
SRSF1-201ENST00000258962 C11orf52Q96A22 123 aa13.43□□□□□ -0.26
SRSF1-201ENST00000258962 TCEAL7Q9BRU2 100 aa13.43□□□□□ -0.26
SRSF1-201ENST00000258962 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.42□□□□□ -0.26
SRSF1-201ENST00000258962 ZNF98A6NK75 572 aa13.42□□□□□ -0.26
SRSF1-201ENST00000258962 M0QZ24 198 aa13.42□□□□□ -0.26
SRSF1-201ENST00000258962 MRPS12O15235 138 aaKnown RBP13.42□□□□□ -0.26
SRSF1-201ENST00000258962 IGHV3-11P01762 117 aa13.42□□□□□ -0.26
SRSF1-201ENST00000258962 C11orf44Q8N8P7 122 aa13.42□□□□□ -0.26
SRSF1-201ENST00000258962 DERL1Q9BUN8 251 aa13.42□□□□□ -0.26
SRSF1-201ENST00000258962 IGHV3OR16-8A0A075B7F1 116 aa13.41□□□□□ -0.26
SRSF1-201ENST00000258962 NDUFB4O95168 129 aa13.41□□□□□ -0.26
SRSF1-201ENST00000258962 RABAC1Q9UI14 185 aa13.41□□□□□ -0.26
SRSF1-201ENST00000258962 ANK2Q01484 3957 aa13.41□□□□□ -0.26
SRSF1-201ENST00000258962 A0A0G2JLM5 398 aa13.4□□□□□ -0.26
SRSF1-201ENST00000258962 BMPR1BO00238 502 aa13.4□□□□□ -0.26
SRSF1-201ENST00000258962 NBEAP1P0C6P0 100 aa13.4□□□□□ -0.26
SRSF1-201ENST00000258962 ARL3P36405 182 aa13.4□□□□□ -0.26
SRSF1-201ENST00000258962 MYCNOSP40205 109 aa13.4□□□□□ -0.26
SRSF1-201ENST00000258962 AKR1C3P42330 323 aa13.4□□□□□ -0.26
SRSF1-201ENST00000258962 SUMO1P63165 101 aaKnown RBP13.4□□□□□ -0.26
SRSF1-201ENST00000258962 RELQ04864 619 aaPredicted RBP13.4□□□□□ -0.26
SRSF1-201ENST00000258962 ADIRFQ15847 76 aa13.4□□□□□ -0.26
SRSF1-201ENST00000258962 RNF212Q495C1 297 aa13.4□□□□□ -0.26
SRSF1-201ENST00000258962 BLNKQ8WV28 456 aa13.4□□□□□ -0.26
SRSF1-201ENST00000258962 ELOVL1Q9BW60 279 aa13.4□□□□□ -0.26
SRSF1-201ENST00000258962 ZNF586Q9NXT0 402 aa13.4□□□□□ -0.26
SRSF1-201ENST00000258962 H3BTX0 84 aa13.39□□□□□ -0.27
SRSF1-201ENST00000258962 IGLC2P0DOY2 106 aa13.39□□□□□ -0.27
SRSF1-201ENST00000258962 HIST1H1EP10412 219 aaKnown RBP13.39□□□□□ -0.27
SRSF1-201ENST00000258962 ATF4P18848 351 aaPredicted RBP13.39□□□□□ -0.27
SRSF1-201ENST00000258962 PRR31Q5SQ13 230 aa13.39□□□□□ -0.27
SRSF1-201ENST00000258962 OR4X2Q8NGF9 303 aa13.39□□□□□ -0.27
SRSF1-201ENST00000258962 ANAPC16Q96DE5 110 aa13.39□□□□□ -0.27
SRSF1-201ENST00000258962 LY96Q9Y6Y9 160 aa13.39□□□□□ -0.27
SRSF1-201ENST00000258962 COLCA2A8K830 154 aa13.39□□□□□ -0.27
SRSF1-201ENST00000258962 PPP1R2P9O14990 202 aa13.39□□□□□ -0.27
SRSF1-201ENST00000258962 BPIFA4PQ86YQ2 179 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms