RNA–Protein interactions for RNA: ENST00000257632.9

UPK3B-201, Transcript of uroplakin 3B, humanhuman

APPRIS P5 TSL 2 BASIC

Gene UPK3B, Length 1,296 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-201ENST00000257632 TENM3Q9P273 2699 aa13.77□□□□□ -0.2
UPK3B-201ENST00000257632 RPL7P18124 248 aaKnown RBP13.77□□□□□ -0.21
UPK3B-201ENST00000257632 ATF4P18848 351 aaPredicted RBP13.77□□□□□ -0.21
UPK3B-201ENST00000257632 ACTL10Q5JWF8 245 aa13.77□□□□□ -0.21
UPK3B-201ENST00000257632 Q6ZWC4 215 aa13.77□□□□□ -0.21
UPK3B-201ENST00000257632 THAP6Q8TBB0 222 aa13.77□□□□□ -0.21
UPK3B-201ENST00000257632 LINC00052Q96N35 136 aa13.77□□□□□ -0.21
UPK3B-201ENST00000257632 ELOA3CA0A087WX78 387 aaPredicted RBP13.76□□□□□ -0.21
UPK3B-201ENST00000257632 MPDU1O75352 247 aa13.76□□□□□ -0.21
UPK3B-201ENST00000257632 PSMB3P49720 205 aa13.76□□□□□ -0.21
UPK3B-201ENST00000257632 FGL1Q08830 312 aa13.76□□□□□ -0.21
UPK3B-201ENST00000257632 PATE2Q6UY27 113 aa13.76□□□□□ -0.21
UPK3B-201ENST00000257632 LINC00305Q7Z4B0 112 aa13.76□□□□□ -0.21
UPK3B-201ENST00000257632 OR11H7Q8NGC8 314 aa13.76□□□□□ -0.21
UPK3B-201ENST00000257632 C16orf92Q96LL3 132 aa13.76□□□□□ -0.21
UPK3B-201ENST00000257632 AGRNO00468 2067 aa13.75□□□□□ -0.21
UPK3B-201ENST00000257632 ISLRO14498 428 aa13.75□□□□□ -0.21
UPK3B-201ENST00000257632 SPRY2O43597 315 aa13.75□□□□□ -0.21
UPK3B-201ENST00000257632 CA1P00915 261 aaPredicted RBP13.75□□□□□ -0.21
UPK3B-201ENST00000257632 RPL12P30050 165 aaKnown RBP13.75□□□□□ -0.21
UPK3B-201ENST00000257632 RPL29P47914 159 aaKnown RBP13.75□□□□□ -0.21
UPK3B-201ENST00000257632 B2MP61769 119 aa13.75□□□□□ -0.21
UPK3B-201ENST00000257632 OPCMLQ14982 345 aa13.75□□□□□ -0.21
UPK3B-201ENST00000257632 OXA1LQ15070 435 aa13.75□□□□□ -0.21
UPK3B-201ENST00000257632 C10orf113Q5VZT2 155 aa13.75□□□□□ -0.21
UPK3B-201ENST00000257632 OR1L4Q8NGR5 311 aa13.75□□□□□ -0.21
UPK3B-201ENST00000257632 OVOL2Q9BRP0 275 aa13.75□□□□□ -0.21
UPK3B-201ENST00000257632 SLC39A9Q9NUM3 307 aa13.75□□□□□ -0.21
UPK3B-201ENST00000257632 TP53TG1Q9Y2A0 90 aa13.75□□□□□ -0.21
UPK3B-201ENST00000257632 HSPB11Q9Y547 144 aa13.75□□□□□ -0.21
UPK3B-201ENST00000257632 SOCS3O14543 225 aa13.74□□□□□ -0.21
UPK3B-201ENST00000257632 PRR20EP86478 221 aa13.74□□□□□ -0.21
UPK3B-201ENST00000257632 PRR20CP86479 221 aa13.74□□□□□ -0.21
UPK3B-201ENST00000257632 PRR20DP86480 221 aa13.74□□□□□ -0.21
UPK3B-201ENST00000257632 PRR20BP86481 221 aa13.74□□□□□ -0.21
UPK3B-201ENST00000257632 PRR20AP86496 221 aa13.74□□□□□ -0.21
UPK3B-201ENST00000257632 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.74□□□□□ -0.21
UPK3B-201ENST00000257632 TRPT1Q86TN4 253 aaKnown RBP13.74□□□□□ -0.21
UPK3B-201ENST00000257632 PFDN5Q99471 154 aa13.74□□□□□ -0.21
UPK3B-201ENST00000257632 DNAJC4Q9NNZ3 241 aa13.74□□□□□ -0.21
UPK3B-201ENST00000257632 PXMP4Q9Y6I8 212 aa13.74□□□□□ -0.21
UPK3B-201ENST00000257632 ZNF709Q8N972 641 aa13.73□□□□□ -0.21
UPK3B-201ENST00000257632 CHAC2Q8WUX2 184 aa13.73□□□□□ -0.21
UPK3B-201ENST00000257632 TMEM37Q8WXS4 190 aa13.73□□□□□ -0.21
UPK3B-201ENST00000257632 ATP5SQ99766 215 aa13.73□□□□□ -0.21
UPK3B-201ENST00000257632 NPCDR1Q9BY65 106 aa13.73□□□□□ -0.21
UPK3B-201ENST00000257632 RYR3Q15413 4870 aa13.73□□□□□ -0.21
UPK3B-201ENST00000257632 SPP1P10451 314 aa13.72□□□□□ -0.21
UPK3B-201ENST00000257632 MORN3Q6PF18 240 aaPredicted RBP13.72□□□□□ -0.21
UPK3B-201ENST00000257632 LRRC20Q8TCA0 184 aa13.72□□□□□ -0.21
UPK3B-201ENST00000257632 RNF183Q96D59 192 aa13.72□□□□□ -0.21
UPK3B-201ENST00000257632 SMIM3Q9BZL3 60 aa13.72□□□□□ -0.21
UPK3B-201ENST00000257632 EDA2RQ9HAV5 297 aa13.72□□□□□ -0.21
UPK3B-201ENST00000257632 KCNIP2Q9NS61 270 aa13.72□□□□□ -0.21
UPK3B-201ENST00000257632 STAB2Q8WWQ8 2551 aa13.72□□□□□ -0.21
UPK3B-201ENST00000257632 GIPP09681 153 aaPredicted RBP13.71□□□□□ -0.21
UPK3B-201ENST00000257632 LYL1P12980 280 aa13.71□□□□□ -0.21
UPK3B-201ENST00000257632 BPIFA4PQ86YQ2 179 aa13.71□□□□□ -0.21
UPK3B-201ENST00000257632 ASB13Q8WXK3 278 aa13.71□□□□□ -0.21
UPK3B-201ENST00000257632 WDR61Q9GZS3 305 aaKnown RBP13.71□□□□□ -0.21
UPK3B-201ENST00000257632 RPRMQ9NS64 109 aa13.71□□□□□ -0.21
UPK3B-201ENST00000257632 C17orf112F2Z3M2 114 aa13.7□□□□□ -0.22
UPK3B-201ENST00000257632 IFNA5P01569 189 aa13.7□□□□□ -0.22
UPK3B-201ENST00000257632 HLA-DRB4P13762 266 aa13.7□□□□□ -0.22
UPK3B-201ENST00000257632 NUTF2P61970 127 aaKnown RBP13.7□□□□□ -0.22
UPK3B-201ENST00000257632 EBLN2Q6P2I7 272 aa13.7□□□□□ -0.22
UPK3B-201ENST00000257632 FOXI2Q6ZQN5 318 aa13.7□□□□□ -0.22
UPK3B-201ENST00000257632 MUC7Q8TAX7 377 aa13.7□□□□□ -0.22
UPK3B-201ENST00000257632 SCGB1C1Q8TD33 95 aa13.7□□□□□ -0.22
UPK3B-201ENST00000257632 HLA-DRB4X5D2U9 266 aa13.7□□□□□ -0.22
UPK3B-201ENST00000257632 A0A087X0K7 114 aa13.69□□□□□ -0.22
UPK3B-201ENST00000257632 H3BMM0 161 aa13.69□□□□□ -0.22
UPK3B-201ENST00000257632 DEFB1P60022 68 aa13.69□□□□□ -0.22
UPK3B-201ENST00000257632 TMEM41BQ5BJD5 291 aa13.69□□□□□ -0.22
UPK3B-201ENST00000257632 MORN5Q5VZ52 161 aa13.69□□□□□ -0.22
UPK3B-201ENST00000257632 GATAD1Q8WUU5 269 aa13.69□□□□□ -0.22
UPK3B-201ENST00000257632 C17orf77Q96MU5 243 aa13.69□□□□□ -0.22
UPK3B-201ENST00000257632 SAV1Q9H4B6 383 aaPredicted RBP13.69□□□□□ -0.22
UPK3B-201ENST00000257632 IGKV3-20P01619 116 aa13.68□□□□□ -0.22
UPK3B-201ENST00000257632 GDF5OSQ5U4N7 250 aa13.68□□□□□ -0.22
UPK3B-201ENST00000257632 SPATA31B1PQ5VZV4 182 aa13.68□□□□□ -0.22
UPK3B-201ENST00000257632 IGFL4Q6B9Z1 124 aa13.68□□□□□ -0.22
UPK3B-201ENST00000257632 OR4B1Q8NGF8 309 aa13.68□□□□□ -0.22
UPK3B-201ENST00000257632 C20orf173Q96LM9 149 aa13.68□□□□□ -0.22
UPK3B-201ENST00000257632 RARRES2Q99969 163 aa13.68□□□□□ -0.22
UPK3B-201ENST00000257632 C3orf84H3BNL1 204 aa13.67□□□□□ -0.22
UPK3B-201ENST00000257632 MRPS12O15235 138 aaKnown RBP13.67□□□□□ -0.22
UPK3B-201ENST00000257632 SNRPCP09234 159 aaKnown RBP13.67□□□□□ -0.22
UPK3B-201ENST00000257632 C4BPBP20851 252 aa13.67□□□□□ -0.22
UPK3B-201ENST00000257632 LCN15Q6UWW0 184 aa13.67□□□□□ -0.22
UPK3B-201ENST00000257632 RNF182Q8N6D2 247 aa13.67□□□□□ -0.22
UPK3B-201ENST00000257632 TRAV8-2A0A0B4J237 113 aa13.66□□□□□ -0.22
UPK3B-201ENST00000257632 TRAV5A0A0B4J249 113 aa13.66□□□□□ -0.22
UPK3B-201ENST00000257632 F6UB75 175 aa13.66□□□□□ -0.22
UPK3B-201ENST00000257632 CXCL2P19875 107 aa13.66□□□□□ -0.22
UPK3B-201ENST00000257632 GCSAMLQ5JQS6 135 aa13.66□□□□□ -0.22
UPK3B-201ENST00000257632 FAM78BQ5VT40 261 aa13.66□□□□□ -0.22
UPK3B-201ENST00000257632 ZNF738Q8NE65 137 aa13.66□□□□□ -0.22
UPK3B-201ENST00000257632 OR11H2Q8NH07 326 aa13.66□□□□□ -0.22
UPK3B-201ENST00000257632 C1QTNF4Q9BXJ3 329 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms