RNA–Protein interactions for RNA: ENST00000257189.4

DSG3-201, Transcript of desmoglein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DSG3, Length 5,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSG3-201ENST00000257189 RHODO00212 210 aa6.73□□□□□ -1.33
DSG3-201ENST00000257189 FGF6P10767 208 aa6.73□□□□□ -1.33
DSG3-201ENST00000257189 FAM231DQ6ZW35 169 aa6.73□□□□□ -1.33
DSG3-201ENST00000257189 UBE2DNLQ8IWF7 75 aa6.73□□□□□ -1.33
DSG3-201ENST00000257189 VSIRQ9H7M9 311 aa6.73□□□□□ -1.33
DSG3-201ENST00000257189 LSM4Q9Y4Z0 139 aaKnown RBP6.73□□□□□ -1.33
DSG3-201ENST00000257189 LAMB2P55268 1798 aa6.73□□□□□ -1.33
DSG3-201ENST00000257189 IGKV1D-13A0A0B4J2D9 117 aa6.73□□□□□ -1.33
DSG3-201ENST00000257189 PRSS46E5RG02 174 aa6.73□□□□□ -1.33
DSG3-201ENST00000257189 NPYP01303 97 aa6.73□□□□□ -1.33
DSG3-201ENST00000257189 IGKV1-13P0DP09 117 aa6.73□□□□□ -1.33
DSG3-201ENST00000257189 SRSF2Q01130 221 aaKnown RBP6.73□□□□□ -1.33
DSG3-201ENST00000257189 DMRTC2Q8IXT2 367 aaPredicted RBP6.73□□□□□ -1.33
DSG3-201ENST00000257189 ZNRF1Q8ND25 227 aa6.73□□□□□ -1.33
DSG3-201ENST00000257189 CDCP2Q5VXM1 449 aa6.73□□□□□ -1.33
DSG3-201ENST00000257189 Q6ZS49 121 aa6.73□□□□□ -1.33
DSG3-201ENST00000257189 CARD19Q96LW7 228 aa6.73□□□□□ -1.33
DSG3-201ENST00000257189 HAMPP81172 84 aa6.72□□□□□ -1.33
DSG3-201ENST00000257189 MRPL14Q6P1L8 145 aaKnown RBP6.72□□□□□ -1.33
DSG3-201ENST00000257189 SIPA1L3O60292 1781 aaPredicted RBP6.72□□□□□ -1.33
DSG3-201ENST00000257189 K7EMI3 77 aa6.72□□□□□ -1.33
DSG3-201ENST00000257189 SUMO4Q6EEV6 95 aa6.72□□□□□ -1.33
DSG3-201ENST00000257189 RCHY1Q96PM5 261 aa6.72□□□□□ -1.33
DSG3-201ENST00000257189 TMEM133Q9H2Q1 129 aa6.72□□□□□ -1.33
DSG3-201ENST00000257189 SPANXB1Q9NS25 103 aaPredicted RBP6.72□□□□□ -1.33
DSG3-201ENST00000257189 ICE1Q9Y2F5 2266 aa6.72□□□□□ -1.33
DSG3-201ENST00000257189 A0A0U1RRA0 63 aa6.72□□□□□ -1.33
DSG3-201ENST00000257189 PAX8Q06710 450 aa6.72□□□□□ -1.33
DSG3-201ENST00000257189 TMEM75Q8N9X5 138 aa6.72□□□□□ -1.33
DSG3-201ENST00000257189 MBNL3Q9NUK0 354 aaKnown RBP6.72□□□□□ -1.33
DSG3-201ENST00000257189 ZNF319Q9P2F9 582 aa6.72□□□□□ -1.33
DSG3-201ENST00000257189 IGHV3OR16-13A0A075B7E8 117 aa6.72□□□□□ -1.33
DSG3-201ENST00000257189 A0A087WV48 116 aa6.72□□□□□ -1.33
DSG3-201ENST00000257189 IGHV3-74A0A0B4J1X5 117 aa6.72□□□□□ -1.33
DSG3-201ENST00000257189 IGHV3-66A0A0C4DH42 116 aa6.72□□□□□ -1.33
DSG3-201ENST00000257189 LY6EQ16553 131 aa6.72□□□□□ -1.33
DSG3-201ENST00000257189 TMEM243Q9BU79 118 aa6.72□□□□□ -1.33
DSG3-201ENST00000257189 TRAV40A0A0B4J280 105 aa6.72□□□□□ -1.33
DSG3-201ENST00000257189 CD55P08174 381 aa6.72□□□□□ -1.33
DSG3-201ENST00000257189 Q86TA4 180 aa6.72□□□□□ -1.33
DSG3-201ENST00000257189 ZNF625Q96I27 306 aaPredicted RBP6.72□□□□□ -1.33
DSG3-201ENST00000257189 PRO3102Q9H379 93 aa6.72□□□□□ -1.33
DSG3-201ENST00000257189 ARAP2Q8WZ64 1704 aa6.72□□□□□ -1.33
DSG3-201ENST00000257189 IGHV2-70DA0A0C4DH43 119 aa6.71□□□□□ -1.33
DSG3-201ENST00000257189 ZFP36L1Q07352 338 aaKnown RBP6.71□□□□□ -1.33
DSG3-201ENST00000257189 IGHV3-35A0A0C4DH35 117 aa6.71□□□□□ -1.34
DSG3-201ENST00000257189 NTN3O00634 580 aaPredicted RBP6.71□□□□□ -1.34
DSG3-201ENST00000257189 CDKN1AP38936 164 aa6.71□□□□□ -1.34
DSG3-201ENST00000257189 Q0VFX4 171 aa6.71□□□□□ -1.34
DSG3-201ENST00000257189 MRPL55Q7Z7F7 128 aaKnown RBP6.71□□□□□ -1.34
DSG3-201ENST00000257189 LIME1Q9H400 295 aa6.71□□□□□ -1.34
DSG3-201ENST00000257189 B4DSR2 109 aa6.71□□□□□ -1.34
DSG3-201ENST00000257189 ADCYAP1P18509 176 aa6.71□□□□□ -1.34
DSG3-201ENST00000257189 FOXG1P55316 489 aaPredicted RBP6.71□□□□□ -1.34
DSG3-201ENST00000257189 SIGLEC8Q9NYZ4 499 aa6.71□□□□□ -1.34
DSG3-201ENST00000257189 IGHV3-23P01764 117 aa6.71□□□□□ -1.34
DSG3-201ENST00000257189 HLA-DRB4P13762 266 aa6.71□□□□□ -1.34
DSG3-201ENST00000257189 FAM104BQ5XKR9 115 aa6.71□□□□□ -1.34
DSG3-201ENST00000257189 DEFB125Q8N687 156 aa6.71□□□□□ -1.34
DSG3-201ENST00000257189 SCRT1Q9BWW7 348 aa6.71□□□□□ -1.34
DSG3-201ENST00000257189 HLA-DRB4X5D2U9 266 aa6.71□□□□□ -1.34
DSG3-201ENST00000257189 GOLGB1Q14789 3259 aaKnown RBP6.71□□□□□ -1.34
DSG3-201ENST00000257189 SBF1O95248 1867 aa6.71□□□□□ -1.34
DSG3-201ENST00000257189 ECM29Q5VYK3 1845 aa6.71□□□□□ -1.34
DSG3-201ENST00000257189 CACNA1EQ15878 2313 aa6.7□□□□□ -1.34
DSG3-201ENST00000257189 PLA2G2AP14555 144 aa6.7□□□□□ -1.34
DSG3-201ENST00000257189 CRYBA4P53673 196 aa6.7□□□□□ -1.34
DSG3-201ENST00000257189 STPG4Q8N801 248 aa6.7□□□□□ -1.34
DSG3-201ENST00000257189 NRXN2Q9P2S2 1712 aa6.7□□□□□ -1.34
DSG3-201ENST00000257189 IGHV3-49A0A0A0MS15 119 aa6.7□□□□□ -1.34
DSG3-201ENST00000257189 IGLC7A0M8Q6 106 aa6.7□□□□□ -1.34
DSG3-201ENST00000257189 C1QCP02747 245 aa6.7□□□□□ -1.34
DSG3-201ENST00000257189 COX6A1P12074 109 aa6.7□□□□□ -1.34
DSG3-201ENST00000257189 SUPT4H1P63272 117 aaKnown RBP6.7□□□□□ -1.34
DSG3-201ENST00000257189 NSUN5P1Q3KNT7 163 aa6.7□□□□□ -1.34
DSG3-201ENST00000257189 ZNF329Q86UD4 541 aa6.7□□□□□ -1.34
DSG3-201ENST00000257189 GLMPQ8WWB7 406 aa6.7□□□□□ -1.34
DSG3-201ENST00000257189 PRSS22Q9GZN4 317 aa6.7□□□□□ -1.34
DSG3-201ENST00000257189 NUP205Q92621 2012 aa6.7□□□□□ -1.34
DSG3-201ENST00000257189 LOC102723996A0A087X1L8 192 aa6.7□□□□□ -1.34
DSG3-201ENST00000257189 TRBV7-1A0A0A6YYK4 115 aa6.7□□□□□ -1.34
DSG3-201ENST00000257189 KIR2DL5BA0A0G2JN68 375 aa6.7□□□□□ -1.34
DSG3-201ENST00000257189 KIR2DL5BA0A0G2JPC4 375 aa6.7□□□□□ -1.34
DSG3-201ENST00000257189 F6UB75 175 aa6.7□□□□□ -1.34
DSG3-201ENST00000257189 EGR2P11161 476 aaPredicted RBP6.7□□□□□ -1.34
DSG3-201ENST00000257189 KIR2DL5AQ8N109 375 aa6.7□□□□□ -1.34
DSG3-201ENST00000257189 IMMP1LQ96LU5 166 aa6.7□□□□□ -1.34
DSG3-201ENST00000257189 SHISA9B4DS77 424 aa6.7□□□□□ -1.34
DSG3-201ENST00000257189 ZMAT4Q9H898 229 aa6.7□□□□□ -1.34
DSG3-201ENST00000257189 LTBP1Q14766 1721 aa6.7□□□□□ -1.34
DSG3-201ENST00000257189 PLXNA1Q9UIW2 1896 aa6.7□□□□□ -1.34
DSG3-201ENST00000257189 ZNF638Q14966 1978 aaKnown RBP6.7□□□□□ -1.34
DSG3-201ENST00000257189 PPIFP30405 207 aaKnown RBP6.69□□□□□ -1.34
DSG3-201ENST00000257189 KLRD1Q13241 179 aa6.69□□□□□ -1.34
DSG3-201ENST00000257189 PAQR4Q8N4S7 273 aaPredicted RBP6.69□□□□□ -1.34
DSG3-201ENST00000257189 LINC01356Q8N9X3 169 aa6.69□□□□□ -1.34
DSG3-201ENST00000257189 A0A0B4J2C4 111 aa6.69□□□□□ -1.34
DSG3-201ENST00000257189 IGLL1P15814 213 aa6.69□□□□□ -1.34
DSG3-201ENST00000257189 ATG2BQ96BY7 2078 aa6.69□□□□□ -1.34
DSG3-201ENST00000257189 TRAV41A0A0B4J266 112 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms