RNA–Protein interactions for RNA: ENST00000256552.10

TRPM1-201, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 5,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-201ENST00000256552 SAA2P0DJI9 122 aaPredicted RBP8.4□□□□□ -1.06
TRPM1-201ENST00000256552 CEND1Q8N111 149 aa8.4□□□□□ -1.06
TRPM1-201ENST00000256552 PRCDQ00LT1 54 aa8.4□□□□□ -1.06
TRPM1-201ENST00000256552 IQCF6A8MYZ5 107 aa8.4□□□□□ -1.07
TRPM1-201ENST00000256552 TAL2Q16559 108 aa8.4□□□□□ -1.07
TRPM1-201ENST00000256552 WDR81Q562E7 1941 aa8.4□□□□□ -1.07
TRPM1-201ENST00000256552 HEATR5BQ9P2D3 2071 aa8.4□□□□□ -1.07
TRPM1-201ENST00000256552 UNC13CQ8NB66 2214 aa8.4□□□□□ -1.07
TRPM1-201ENST00000256552 TRAV3A0A0B4J244 114 aa8.4□□□□□ -1.07
TRPM1-201ENST00000256552 K7ERJ3 54 aa8.4□□□□□ -1.07
TRPM1-201ENST00000256552 EFNA2O43921 213 aa8.4□□□□□ -1.07
TRPM1-201ENST00000256552 CELA3BP08861 270 aa8.4□□□□□ -1.07
TRPM1-201ENST00000256552 PPIFP30405 207 aaKnown RBP8.4□□□□□ -1.07
TRPM1-201ENST00000256552 KLF5Q13887 457 aaPredicted RBP8.4□□□□□ -1.07
TRPM1-201ENST00000256552 FGFBP3Q8TAT2 258 aa8.4□□□□□ -1.07
TRPM1-201ENST00000256552 NABP1Q96AH0 204 aa8.4□□□□□ -1.07
TRPM1-201ENST00000256552 NRXN2Q9P2S2 1712 aa8.39□□□□□ -1.07
TRPM1-201ENST00000256552 A4D1N5 150 aa8.39□□□□□ -1.07
TRPM1-201ENST00000256552 Q6ZS49 121 aa8.39□□□□□ -1.07
TRPM1-201ENST00000256552 SPACA3Q8IXA5 215 aa8.39□□□□□ -1.07
TRPM1-201ENST00000256552 E9PLN8 166 aa8.39□□□□□ -1.07
TRPM1-201ENST00000256552 LYZL1Q6UWQ5 148 aa8.39□□□□□ -1.07
TRPM1-201ENST00000256552 SLC50A1Q9BRV3 221 aa8.39□□□□□ -1.07
TRPM1-201ENST00000256552 S4R3C0 116 aa8.39□□□□□ -1.07
TRPM1-201ENST00000256552 CABIN1Q9Y6J0 2220 aa8.39□□□□□ -1.07
TRPM1-201ENST00000256552 COL11A2P13942 1736 aaPredicted RBP8.39□□□□□ -1.07
TRPM1-201ENST00000256552 SMIM27A0A1W2PRY6 76 aa8.39□□□□□ -1.07
TRPM1-201ENST00000256552 ZFP36L1Q07352 338 aaKnown RBP8.39□□□□□ -1.07
TRPM1-201ENST00000256552 ANKRD29Q8N6D5 301 aa8.39□□□□□ -1.07
TRPM1-201ENST00000256552 C15orf53Q8NAA6 179 aa8.39□□□□□ -1.07
TRPM1-201ENST00000256552 FOXA2Q9Y261 457 aaPredicted RBP8.39□□□□□ -1.07
TRPM1-201ENST00000256552 IGHV3-35A0A0C4DH35 117 aa8.39□□□□□ -1.07
TRPM1-201ENST00000256552 NDUFV3P56181 108 aaKnown RBP8.39□□□□□ -1.07
TRPM1-201ENST00000256552 TCRAP04437 139 aa8.38□□□□□ -1.07
TRPM1-201ENST00000256552 FOXF2Q12947 444 aa8.38□□□□□ -1.07
TRPM1-201ENST00000256552 MRPL55Q7Z7F7 128 aaKnown RBP8.38□□□□□ -1.07
TRPM1-201ENST00000256552 MT-ATP8P03928 68 aa8.38□□□□□ -1.07
TRPM1-201ENST00000256552 LGALS9BQ3B8N2 356 aa8.38□□□□□ -1.07
TRPM1-201ENST00000256552 LGALS9CQ6DKI2 356 aa8.38□□□□□ -1.07
TRPM1-201ENST00000256552 CENPVQ7Z7K6 275 aaPredicted RBP8.38□□□□□ -1.07
TRPM1-201ENST00000256552 ZNF329Q86UD4 541 aa8.38□□□□□ -1.07
TRPM1-201ENST00000256552 SPANXB1Q9NS25 103 aaPredicted RBP8.38□□□□□ -1.07
TRPM1-201ENST00000256552 MYMXA0A1B0GTQ4 84 aa8.38□□□□□ -1.07
TRPM1-201ENST00000256552 RFPL3SP0C7P2 107 aa8.38□□□□□ -1.07
TRPM1-201ENST00000256552 PCOLCEQ15113 449 aa8.38□□□□□ -1.07
TRPM1-201ENST00000256552 BRCA1P38398 1863 aaKnown RBP8.38□□□□□ -1.07
TRPM1-201ENST00000256552 IGKV1-6A0A0C4DH72 117 aa8.38□□□□□ -1.07
TRPM1-201ENST00000256552 IGLL5B9A064 214 aa8.38□□□□□ -1.07
TRPM1-201ENST00000256552 C20orf204Q6ZNR8 217 aa8.38□□□□□ -1.07
TRPM1-201ENST00000256552 ATP5J2P56134 94 aa8.37□□□□□ -1.07
TRPM1-201ENST00000256552 LINC00205P59089 165 aa8.37□□□□□ -1.07
TRPM1-201ENST00000256552 NRN1LQ496H8 165 aa8.37□□□□□ -1.07
TRPM1-201ENST00000256552 SMKR1H3BMG3 65 aa8.37□□□□□ -1.07
TRPM1-201ENST00000256552 K7EN84 100 aa8.37□□□□□ -1.07
TRPM1-201ENST00000256552 PAX4O43316 350 aa8.37□□□□□ -1.07
TRPM1-201ENST00000256552 HOXD3P31249 432 aaPredicted RBP8.37□□□□□ -1.07
TRPM1-201ENST00000256552 SYNJ2BPP57105 145 aa8.37□□□□□ -1.07
TRPM1-201ENST00000256552 MRPL23Q16540 153 aaKnown RBP8.37□□□□□ -1.07
TRPM1-201ENST00000256552 SPATA12Q7Z6I5 190 aa8.37□□□□□ -1.07
TRPM1-201ENST00000256552 DUX3Q96PT4 197 aa8.37□□□□□ -1.07
TRPM1-201ENST00000256552 LINC00473A8K010 186 aa8.37□□□□□ -1.07
TRPM1-201ENST00000256552 EXOC3-AS1Q8N2X6 119 aa8.37□□□□□ -1.07
TRPM1-201ENST00000256552 YLPM1P49750 1951 aaKnown RBP8.37□□□□□ -1.07
TRPM1-201ENST00000256552 COX6A1P12074 109 aa8.37□□□□□ -1.07
TRPM1-201ENST00000256552 C12orf74Q32Q52 190 aa8.37□□□□□ -1.07
TRPM1-201ENST00000256552 DUX4L9Q6RFH8 374 aaPredicted RBP8.37□□□□□ -1.07
TRPM1-201ENST00000256552 FAM214BQ7L5A3 538 aa8.37□□□□□ -1.07
TRPM1-201ENST00000256552 AMN1Q8IY45 258 aa8.37□□□□□ -1.07
TRPM1-201ENST00000256552 SSC4DQ8WTU2 575 aa8.37□□□□□ -1.07
TRPM1-201ENST00000256552 CLPSP04118 112 aa8.37□□□□□ -1.07
TRPM1-201ENST00000256552 IGHV3OR16-13A0A075B7E8 117 aa8.36□□□□□ -1.07
TRPM1-201ENST00000256552 IGHV3-74A0A0B4J1X5 117 aa8.36□□□□□ -1.07
TRPM1-201ENST00000256552 PSG7Q13046 419 aa8.36□□□□□ -1.07
TRPM1-201ENST00000256552 ASPHD1Q5U4P2 390 aa8.36□□□□□ -1.07
TRPM1-201ENST00000256552 TMEM158Q8WZ71 300 aa8.36□□□□□ -1.07
TRPM1-201ENST00000256552 TRBV6-6A0A0A6YYG2 114 aa8.36□□□□□ -1.07
TRPM1-201ENST00000256552 TRAV40A0A0B4J280 105 aa8.36□□□□□ -1.07
TRPM1-201ENST00000256552 KNCNA6PVL3 124 aa8.36□□□□□ -1.07
TRPM1-201ENST00000256552 IGHG4P01861 327 aa8.36□□□□□ -1.07
TRPM1-201ENST00000256552 FAM201AQ5SY85 155 aa8.36□□□□□ -1.07
TRPM1-201ENST00000256552 C20orf78Q9BR46 151 aa8.36□□□□□ -1.07
TRPM1-201ENST00000256552 PAPPA2Q9BXP8 1791 aa8.36□□□□□ -1.07
TRPM1-201ENST00000256552 XIRP1Q702N8 1843 aaKnown RBP8.36□□□□□ -1.07
TRPM1-201ENST00000256552 KIAA0100Q14667 2235 aaKnown RBP8.36□□□□□ -1.07
TRPM1-201ENST00000256552 IGHV3-23P01764 117 aa8.36□□□□□ -1.07
TRPM1-201ENST00000256552 ACYP1P07311 99 aa8.36□□□□□ -1.07
TRPM1-201ENST00000256552 GFRA4Q9GZZ7 299 aa8.36□□□□□ -1.07
TRPM1-201ENST00000256552 DOCK6Q96HP0 2047 aa8.36□□□□□ -1.07
TRPM1-201ENST00000256552 ARMS2P0C7Q2 107 aa8.35□□□□□ -1.07
TRPM1-201ENST00000256552 MYOD1P15172 320 aa8.35□□□□□ -1.07
TRPM1-201ENST00000256552 TEN1Q86WV5 123 aa8.35□□□□□ -1.07
TRPM1-201ENST00000256552 FAM90A27PA6NNH2 459 aa8.35□□□□□ -1.07
TRPM1-201ENST00000256552 ADARB2-AS1A8MUL3 147 aa8.35□□□□□ -1.07
TRPM1-201ENST00000256552 IGKV1-39P01597 117 aa8.35□□□□□ -1.07
TRPM1-201ENST00000256552 IGKV1D-39P04432 117 aa8.35□□□□□ -1.07
TRPM1-201ENST00000256552 RNASE4P34096 147 aaKnown RBP8.35□□□□□ -1.07
TRPM1-201ENST00000256552 C8orf46Q8TAG6 207 aa8.35□□□□□ -1.07
TRPM1-201ENST00000256552 ZNF576Q9H609 170 aa8.35□□□□□ -1.07
TRPM1-201ENST00000256552 TRGV11A0A075B6L2 103 aa8.35□□□□□ -1.07
TRPM1-201ENST00000256552 IGKV3D-20A0A0C4DH25 116 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms