RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 SOCS3O14543 225 aa15.11■□□□□ 0.01
NEDD8-201ENST00000250495 ZNF705DP0CH99 300 aaPredicted RBP15.11■□□□□ 0.01
NEDD8-201ENST00000250495 ZNF705BP0CI00 300 aaPredicted RBP15.11■□□□□ 0.01
NEDD8-201ENST00000250495 FXYD7P58549 80 aa15.11■□□□□ 0.01
NEDD8-201ENST00000250495 DEFB1P60022 68 aa15.11■□□□□ 0.01
NEDD8-201ENST00000250495 C4orf46Q504U0 113 aa15.11■□□□□ 0.01
NEDD8-201ENST00000250495 EBLN2Q6P2I7 272 aa15.11■□□□□ 0.01
NEDD8-201ENST00000250495 NDUFAF3Q9BU61 184 aa15.11■□□□□ 0.01
NEDD8-201ENST00000250495 P0DMU3 169 aa15.1■□□□□ 0.01
NEDD8-201ENST00000250495 FAM231AP0DMU4 169 aa15.1■□□□□ 0.01
NEDD8-201ENST00000250495 FAM231CP0DMU5 169 aa15.1■□□□□ 0.01
NEDD8-201ENST00000250495 MEOX2P50222 304 aa15.1■□□□□ 0.01
NEDD8-201ENST00000250495 RFNGQ9Y644 331 aa15.1■□□□□ 0.01
NEDD8-201ENST00000250495 IGHV3OR16-12A0A075B7B8 117 aa15.09■□□□□ 0.01
NEDD8-201ENST00000250495 IGKV1OR2-108A0A075B7D4 117 aa15.09■□□□□ 0.01
NEDD8-201ENST00000250495 SYNGR2O43760 224 aa15.09■□□□□ 0.01
NEDD8-201ENST00000250495 SFT2D2O95562 160 aa15.09■□□□□ 0.01
NEDD8-201ENST00000250495 S100A7P31151 101 aa15.09■□□□□ 0.01
NEDD8-201ENST00000250495 EMP1P54849 157 aa15.09■□□□□ 0.01
NEDD8-201ENST00000250495 PSG9Q00887 426 aa15.09■□□□□ 0.01
NEDD8-201ENST00000250495 IFITM2Q01629 132 aa15.09■□□□□ 0.01
NEDD8-201ENST00000250495 C12orf45Q8N5I9 185 aaPredicted RBP15.09■□□□□ 0.01
NEDD8-201ENST00000250495 RPRMQ9NS64 109 aa15.09■□□□□ 0.01
NEDD8-201ENST00000250495 SLC45A2Q9UMX9 530 aa15.09■□□□□ 0.01
NEDD8-201ENST00000250495 WRBO00258 174 aa15.08■□□□□ 0
NEDD8-201ENST00000250495 GALR1P47211 349 aa15.08■□□□□ 0
NEDD8-201ENST00000250495 PAX9P55771 341 aa15.08■□□□□ 0
NEDD8-201ENST00000250495 C9orf62Q8N4C0 152 aa15.08■□□□□ 0
NEDD8-201ENST00000250495 POM121L12Q8N7R1 296 aa15.08■□□□□ 0
NEDD8-201ENST00000250495 ZNF709Q8N972 641 aa15.08■□□□□ 0
NEDD8-201ENST00000250495 OR2T35Q8NGX2 323 aa15.08■□□□□ 0
NEDD8-201ENST00000250495 C16orf92Q96LL3 132 aa15.08■□□□□ 0
NEDD8-201ENST00000250495 MAGT1Q9H0U3 335 aa15.08■□□□□ 0
NEDD8-201ENST00000250495 GOLT1BQ9Y3E0 138 aa15.08■□□□□ 0
NEDD8-201ENST00000250495 TEX48A0A1B0GUV7 120 aa15.07■□□□□ 0
NEDD8-201ENST00000250495 HOXB5P09067 269 aa15.07■□□□□ 0
NEDD8-201ENST00000250495 PPP1R1AQ13522 171 aa15.07■□□□□ 0
NEDD8-201ENST00000250495 FAM78BQ5VT40 261 aa15.07■□□□□ 0
NEDD8-201ENST00000250495 LINC00336Q6ZUF6 198 aa15.07■□□□□ 0
NEDD8-201ENST00000250495 BPIFCQ8NFQ6 507 aa15.07■□□□□ 0
NEDD8-201ENST00000250495 A0A0J9YX75 114 aa15.06■□□□□ 0
NEDD8-201ENST00000250495 ZNF98A6NK75 572 aa15.06■□□□□ 0
NEDD8-201ENST00000250495 SMLR1H3BR10 107 aa15.06■□□□□ 0
NEDD8-201ENST00000250495 SPANXN5Q5MJ07 72 aa15.06■□□□□ 0
NEDD8-201ENST00000250495 OR4D5Q8NGN0 318 aa15.06■□□□□ 0
NEDD8-201ENST00000250495 MITD1Q8WV92 249 aa15.06■□□□□ 0
NEDD8-201ENST00000250495 FAM210BQ96KR6 192 aa15.06■□□□□ 0
NEDD8-201ENST00000250495 RSG1Q9BU20 258 aa15.06■□□□□ 0
NEDD8-201ENST00000250495 SLC35B3Q9H1N7 401 aa15.06■□□□□ 0
NEDD8-201ENST00000250495 SLC25A22Q9H936 323 aa15.06■□□□□ 0
NEDD8-201ENST00000250495 C9orf170A2RU37 121 aa15.05■□□□□ -0
NEDD8-201ENST00000250495 PRSS46E5RG02 174 aa15.05■□□□□ -0
NEDD8-201ENST00000250495 F6UB75 175 aa15.05■□□□□ -0
NEDD8-201ENST00000250495 G3V3Q6 166 aa15.05■□□□□ -0
NEDD8-201ENST00000250495 ORM2P19652 201 aa15.05■□□□□ -0
NEDD8-201ENST00000250495 NDUFA5Q16718 116 aa15.05■□□□□ -0
NEDD8-201ENST00000250495 GPR82Q96P67 336 aa15.05■□□□□ -0
NEDD8-201ENST00000250495 SCRT1Q9BWW7 348 aa15.05■□□□□ -0
NEDD8-201ENST00000250495 SLC25A32Q9H2D1 315 aa15.05■□□□□ -0
NEDD8-201ENST00000250495 DKK2Q9UBU2 259 aa15.05■□□□□ -0
NEDD8-201ENST00000250495 STRAPQ9Y3F4 350 aaKnown RBP15.05■□□□□ -0
NEDD8-201ENST00000250495 GOSR2O14653 212 aa15.04■□□□□ -0
NEDD8-201ENST00000250495 HBE1P02100 147 aa15.04■□□□□ -0
NEDD8-201ENST00000250495 GSG1LQ6UXU4 331 aa15.04■□□□□ -0
NEDD8-201ENST00000250495 OR1B1Q8NGR6 318 aa15.04■□□□□ -0
NEDD8-201ENST00000250495 NIPSNAP3BQ9BS92 247 aa15.04■□□□□ -0
NEDD8-201ENST00000250495 TMEM147Q9BVK8 224 aa15.04■□□□□ -0
NEDD8-201ENST00000250495 DOK5Q9P104 306 aa15.04■□□□□ -0
NEDD8-201ENST00000250495 HSPB11Q9Y547 144 aa15.04■□□□□ -0
NEDD8-201ENST00000250495 AKR1C1Q04828 323 aa15.03■□□□□ -0
NEDD8-201ENST00000250495 FAM222AQ5U5X8 452 aa15.03■□□□□ -0
NEDD8-201ENST00000250495 C1orf158Q8N1D5 194 aa15.03■□□□□ -0
NEDD8-201ENST00000250495 OR11H4Q8NGC9 324 aa15.03■□□□□ -0
NEDD8-201ENST00000250495 C20orf173Q96LM9 149 aa15.03■□□□□ -0
NEDD8-201ENST00000250495 BOLA1Q9Y3E2 137 aa15.03■□□□□ -0
NEDD8-201ENST00000250495 IFNA21P01568 189 aa15.02■□□□□ -0
NEDD8-201ENST00000250495 GATA2P23769 480 aaPredicted RBP15.02■□□□□ -0
NEDD8-201ENST00000250495 H2BFSP57053 126 aa15.02■□□□□ -0
NEDD8-201ENST00000250495 ID3Q02535 119 aa15.02■□□□□ -0
NEDD8-201ENST00000250495 RRN3P1Q2M238 152 aa15.02■□□□□ -0
NEDD8-201ENST00000250495 TMEM144Q7Z5S9 345 aa15.02■□□□□ -0
NEDD8-201ENST00000250495 LOC102723971A0A1B0GUV8 181 aa15.01□□□□□ -0.01
NEDD8-201ENST00000250495 HMSDA8MTL9 139 aa15.01□□□□□ -0.01
NEDD8-201ENST00000250495 A8MTW9 85 aa15.01□□□□□ -0.01
NEDD8-201ENST00000250495 H3BP45 60 aa15.01□□□□□ -0.01
NEDD8-201ENST00000250495 Q5BKY6 102 aa15.01□□□□□ -0.01
NEDD8-201ENST00000250495 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.01□□□□□ -0.01
NEDD8-201ENST00000250495 TMEM182Q6ZP80 229 aaPredicted RBP15.01□□□□□ -0.01
NEDD8-201ENST00000250495 HECTD4Q9Y4D8 3996 aa15.01□□□□□ -0.01
NEDD8-201ENST00000250495 DUSP14O95147 198 aaKnown RBP15□□□□□ -0.01
NEDD8-201ENST00000250495 FGL1Q08830 312 aa15□□□□□ -0.01
NEDD8-201ENST00000250495 ACOT7LQ6ZUV0 252 aa15□□□□□ -0.01
NEDD8-201ENST00000250495 IGF2BP2-AS1Q96M15 143 aa15□□□□□ -0.01
NEDD8-201ENST00000250495 C17orf77Q96MU5 243 aa15□□□□□ -0.01
NEDD8-201ENST00000250495 TMEM208Q9BTX3 173 aa15□□□□□ -0.01
NEDD8-201ENST00000250495 SMCO3A2RU48 225 aa14.99□□□□□ -0.01
NEDD8-201ENST00000250495 ATP6V1G1O75348 118 aa14.99□□□□□ -0.01
NEDD8-201ENST00000250495 CYP2G1PQ6ZSU1 146 aa14.99□□□□□ -0.01
NEDD8-201ENST00000250495 PSENENQ9NZ42 101 aa14.99□□□□□ -0.01
NEDD8-201ENST00000250495 PLA2G2EQ9NZK7 142 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 454.9 ms