RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 TMEM238C9JI98 176 aa12.81□□□□□ -0.36
SIN3B-201ENST00000248054 NUP210LQ5VU65 1888 aa12.81□□□□□ -0.36
SIN3B-201ENST00000248054 C8orf31Q8N9H6 132 aa12.81□□□□□ -0.36
SIN3B-201ENST00000248054 TMEM14BQ9NUH8 114 aa12.81□□□□□ -0.36
SIN3B-201ENST00000248054 SMPXQ9UHP9 88 aa12.81□□□□□ -0.36
SIN3B-201ENST00000248054 RHOGP84095 191 aa12.81□□□□□ -0.36
SIN3B-201ENST00000248054 CLEC19AQ6UXS0 136 aa12.81□□□□□ -0.36
SIN3B-201ENST00000248054 SEC11AP67812 179 aa12.81□□□□□ -0.36
SIN3B-201ENST00000248054 F2Z2F3 143 aa12.8□□□□□ -0.36
SIN3B-201ENST00000248054 CRXO43186 299 aaPredicted RBP12.8□□□□□ -0.36
SIN3B-201ENST00000248054 SLC25A2Q9BXI2 301 aa12.8□□□□□ -0.36
SIN3B-201ENST00000248054 PRSS2P07478 247 aa12.8□□□□□ -0.36
SIN3B-201ENST00000248054 OR5A1Q8NGJ0 315 aa12.8□□□□□ -0.36
SIN3B-201ENST00000248054 FOXC2Q99958 501 aa12.8□□□□□ -0.36
SIN3B-201ENST00000248054 PSG8Q9UQ74 426 aa12.8□□□□□ -0.36
SIN3B-201ENST00000248054 RNASE2P10153 161 aaKnown RBP12.8□□□□□ -0.36
SIN3B-201ENST00000248054 C11orf53Q8IXP5 236 aa12.8□□□□□ -0.36
SIN3B-201ENST00000248054 C10orf55Q5SWW7 151 aa12.8□□□□□ -0.36
SIN3B-201ENST00000248054 SPCS1Q9Y6A9 102 aa12.8□□□□□ -0.36
SIN3B-201ENST00000248054 TRAV8-6A0A0B4J262 113 aa12.79□□□□□ -0.36
SIN3B-201ENST00000248054 NPFFO15130 113 aa12.79□□□□□ -0.36
SIN3B-201ENST00000248054 LOXP28300 417 aaPredicted RBP12.79□□□□□ -0.36
SIN3B-201ENST00000248054 MYO7BQ6PIF6 2116 aa12.79□□□□□ -0.36
SIN3B-201ENST00000248054 TRAV40A0A0B4J280 105 aa12.79□□□□□ -0.36
SIN3B-201ENST00000248054 TYMSP04818 313 aa12.79□□□□□ -0.36
SIN3B-201ENST00000248054 MRPL16Q9NX20 251 aaKnown RBP12.79□□□□□ -0.36
SIN3B-201ENST00000248054 GATA3P23771 443 aa12.79□□□□□ -0.36
SIN3B-201ENST00000248054 SIGMAR1Q99720 223 aa12.79□□□□□ -0.36
SIN3B-201ENST00000248054 MRPL27Q9P0M9 148 aaKnown RBP12.79□□□□□ -0.36
SIN3B-201ENST00000248054 CEP192Q8TEP8 1941 aa12.79□□□□□ -0.36
SIN3B-201ENST00000248054 MYOD1P15172 320 aa12.79□□□□□ -0.36
SIN3B-201ENST00000248054 TTC32Q5I0X7 151 aa12.79□□□□□ -0.36
SIN3B-201ENST00000248054 JKAMPQ9P055 326 aa12.79□□□□□ -0.36
SIN3B-201ENST00000248054 IGHV3-23P01764 117 aa12.78□□□□□ -0.36
SIN3B-201ENST00000248054 KLK15Q9H2R5 256 aa12.78□□□□□ -0.36
SIN3B-201ENST00000248054 DOCK11Q5JSL3 2073 aa12.78□□□□□ -0.36
SIN3B-201ENST00000248054 ORMDL2Q53FV1 153 aa12.78□□□□□ -0.36
SIN3B-201ENST00000248054 GCSAMLQ5JQS6 135 aa12.78□□□□□ -0.36
SIN3B-201ENST00000248054 DUX5Q96PT3 197 aa12.78□□□□□ -0.36
SIN3B-201ENST00000248054 TRAV41A0A0B4J266 112 aa12.78□□□□□ -0.36
SIN3B-201ENST00000248054 POU2AF1Q16633 256 aa12.78□□□□□ -0.36
SIN3B-201ENST00000248054 OR9G4Q8NGQ1 327 aa12.78□□□□□ -0.36
SIN3B-201ENST00000248054 IGHV3-35A0A0C4DH35 117 aa12.77□□□□□ -0.36
SIN3B-201ENST00000248054 H3BRM9 83 aa12.77□□□□□ -0.36
SIN3B-201ENST00000248054 H7C2G1 150 aa12.77□□□□□ -0.36
SIN3B-201ENST00000248054 PRB3Q04118 309 aaPredicted RBP12.77□□□□□ -0.36
SIN3B-201ENST00000248054 C18orf15Q96N68 181 aa12.77□□□□□ -0.36
SIN3B-201ENST00000248054 YPEL4Q96NS1 127 aa12.77□□□□□ -0.36
SIN3B-201ENST00000248054 SRSF1Q07955 248 aaKnown RBP eCLIP12.77□□□□□ -0.373e-8■■□□□ 13.6
SIN3B-201ENST00000248054 KIR3DL3Q8N743 410 aa12.77□□□□□ -0.37
SIN3B-201ENST00000248054 S4R3C0 116 aa12.77□□□□□ -0.37
SIN3B-201ENST00000248054 PCNTO95613 3336 aa12.77□□□□□ -0.37
SIN3B-201ENST00000248054 PCDH15Q96QU1 1955 aa12.77□□□□□ -0.37
SIN3B-201ENST00000248054 MUC21A0A0G2JKD1 596 aa12.77□□□□□ -0.37
SIN3B-201ENST00000248054 MUC21A0A140T8X8 626 aa12.77□□□□□ -0.37
SIN3B-201ENST00000248054 NUPR1O60356 82 aa12.77□□□□□ -0.37
SIN3B-201ENST00000248054 IGKV1-39P01597 117 aa12.77□□□□□ -0.37
SIN3B-201ENST00000248054 IGKV1D-39P04432 117 aa12.77□□□□□ -0.37
SIN3B-201ENST00000248054 UBE2E1P51965 193 aa12.77□□□□□ -0.37
SIN3B-201ENST00000248054 KLRD1Q13241 179 aa12.77□□□□□ -0.37
SIN3B-201ENST00000248054 MUC21Q5SSG8 566 aa12.77□□□□□ -0.37
SIN3B-201ENST00000248054 TMEM170BQ5T4T1 132 aa12.77□□□□□ -0.37
SIN3B-201ENST00000248054 FGF23Q9GZV9 251 aaPredicted RBP12.77□□□□□ -0.37
SIN3B-201ENST00000248054 LRP4O75096 1905 aa12.77□□□□□ -0.37
SIN3B-201ENST00000248054 LHBP01229 141 aa12.77□□□□□ -0.37
SIN3B-201ENST00000248054 IGKV1-16P04430 117 aa12.77□□□□□ -0.37
SIN3B-201ENST00000248054 CD24P25063 80 aa12.77□□□□□ -0.37
SIN3B-201ENST00000248054 PAX9P55771 341 aa12.77□□□□□ -0.37
SIN3B-201ENST00000248054 ZNF726P1Q15940 193 aa12.77□□□□□ -0.37
SIN3B-201ENST00000248054 NAA38Q9BRA0 125 aaKnown RBP12.77□□□□□ -0.37
SIN3B-201ENST00000248054 DPM2O94777 84 aa12.76□□□□□ -0.37
SIN3B-201ENST00000248054 GNG5P63218 68 aa12.76□□□□□ -0.37
SIN3B-201ENST00000248054 GTSF1LQ9H1H1 148 aa12.76□□□□□ -0.37
SIN3B-201ENST00000248054 PYYP10082 97 aa12.76□□□□□ -0.37
SIN3B-201ENST00000248054 K7EM74 188 aa12.76□□□□□ -0.37
SIN3B-201ENST00000248054 M0R381 172 aa12.76□□□□□ -0.37
SIN3B-201ENST00000248054 TMEM50AO95807 157 aa12.76□□□□□ -0.37
SIN3B-201ENST00000248054 LEPP41159 167 aa12.76□□□□□ -0.37
SIN3B-201ENST00000248054 HSD52Q0P140 79 aa12.76□□□□□ -0.37
SIN3B-201ENST00000248054 CSTL1Q9H114 145 aa12.76□□□□□ -0.37
SIN3B-201ENST00000248054 TNFRSF18Q9Y5U5 241 aa12.76□□□□□ -0.37
SIN3B-201ENST00000248054 TTC28Q96AY4 2481 aa12.76□□□□□ -0.37
SIN3B-201ENST00000248054 SHISA9B4DS77 424 aa12.76□□□□□ -0.37
SIN3B-201ENST00000248054 MEIG1Q5JSS6 88 aa12.75□□□□□ -0.37
SIN3B-201ENST00000248054 FAM74A4Q5TZK3 123 aa12.75□□□□□ -0.37
SIN3B-201ENST00000248054 BPESC1Q9GZL8 116 aa12.75□□□□□ -0.37
SIN3B-201ENST00000248054 ESDP10768 282 aa12.75□□□□□ -0.37
SIN3B-201ENST00000248054 PAX2Q02962 417 aa12.75□□□□□ -0.37
SIN3B-201ENST00000248054 LYPD1Q8N2G4 141 aa12.75□□□□□ -0.37
SIN3B-201ENST00000248054 ZNF418Q8TF45 676 aaPredicted RBP12.75□□□□□ -0.37
SIN3B-201ENST00000248054 NDUFA4L2Q9NRX3 87 aa12.75□□□□□ -0.37
SIN3B-201ENST00000248054 TRAV21A0A0B4J279 112 aa12.75□□□□□ -0.37
SIN3B-201ENST00000248054 VDAC2P45880 294 aaPredicted RBP12.75□□□□□ -0.37
SIN3B-201ENST00000248054 JMJD8Q96S16 334 aa12.75□□□□□ -0.37
SIN3B-201ENST00000248054 PYGO2Q9BRQ0 406 aa12.75□□□□□ -0.37
SIN3B-201ENST00000248054 PEMTQ9UBM1 199 aa12.75□□□□□ -0.37
SIN3B-201ENST00000248054 TRBV7-1A0A0A6YYK4 115 aa12.74□□□□□ -0.37
SIN3B-201ENST00000248054 RBX1P62877 108 aa12.74□□□□□ -0.37
SIN3B-201ENST00000248054 OR2K2Q8NGT1 345 aa12.74□□□□□ -0.37
SIN3B-201ENST00000248054 FAM181BA6NEQ2 426 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms