RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 LINC00479Q96M42 142 aa13.32□□□□□ -0.28
CDKN1A-201ENST00000244741 PAXXQ9BUH6 204 aa13.32□□□□□ -0.28
CDKN1A-201ENST00000244741 CDC42EP3Q9UKI2 254 aa13.32□□□□□ -0.28
CDKN1A-201ENST00000244741 PKIAP61925 76 aa13.32□□□□□ -0.28
CDKN1A-201ENST00000244741 FXYD3Q14802 87 aa13.32□□□□□ -0.28
CDKN1A-201ENST00000244741 PVRIGQ6DKI7 326 aa13.32□□□□□ -0.28
CDKN1A-201ENST00000244741 TMEM160Q9NX00 188 aa13.32□□□□□ -0.28
CDKN1A-201ENST00000244741 GRIFINA4D1Z8 144 aa13.31□□□□□ -0.28
CDKN1A-201ENST00000244741 CRYGCP07315 174 aa13.31□□□□□ -0.28
CDKN1A-201ENST00000244741 RPL27AP46776 148 aaKnown RBP13.31□□□□□ -0.28
CDKN1A-201ENST00000244741 SELENOTP62341 195 aa13.31□□□□□ -0.28
CDKN1A-201ENST00000244741 PPP1R27Q86WC6 154 aa13.31□□□□□ -0.28
CDKN1A-201ENST00000244741 MRPL41Q8IXM3 137 aaKnown RBP13.31□□□□□ -0.28
CDKN1A-201ENST00000244741 MRPL18Q9H0U6 180 aaKnown RBP13.31□□□□□ -0.28
CDKN1A-201ENST00000244741 OSTCQ9NRP0 149 aa13.31□□□□□ -0.28
CDKN1A-201ENST00000244741 JMJD1CQ15652 2540 aa13.31□□□□□ -0.28
CDKN1A-201ENST00000244741 A6NDX4 124 aa13.31□□□□□ -0.28
CDKN1A-201ENST00000244741 SNRPCP09234 159 aaKnown RBP13.31□□□□□ -0.28
CDKN1A-201ENST00000244741 C5orf64Q2M2E5 130 aa13.31□□□□□ -0.28
CDKN1A-201ENST00000244741 Q8N9W7 124 aa13.31□□□□□ -0.28
CDKN1A-201ENST00000244741 NPBQ8NG41 125 aa13.31□□□□□ -0.28
CDKN1A-201ENST00000244741 RBM14Q96PK6 669 aaKnown RBP13.31□□□□□ -0.28
CDKN1A-201ENST00000244741 IGHV3-21A0A0B4J1V1 117 aa13.3□□□□□ -0.28
CDKN1A-201ENST00000244741 MGST1P10620 155 aaKnown RBP13.3□□□□□ -0.28
CDKN1A-201ENST00000244741 LINC00305Q7Z4B0 112 aa13.3□□□□□ -0.28
CDKN1A-201ENST00000244741 FXYD5Q96DB9 178 aa13.3□□□□□ -0.28
CDKN1A-201ENST00000244741 RNF5Q99942 180 aa13.3□□□□□ -0.28
CDKN1A-201ENST00000244741 SETD2Q9BYW2 2564 aaPredicted RBP13.3□□□□□ -0.28
CDKN1A-201ENST00000244741 ZNF705GA8MUZ8 300 aaPredicted RBP13.3□□□□□ -0.28
CDKN1A-201ENST00000244741 ISLRO14498 428 aa13.3□□□□□ -0.28
CDKN1A-201ENST00000244741 NDUFA3O95167 84 aa13.3□□□□□ -0.28
CDKN1A-201ENST00000244741 ORM2P19652 201 aa13.3□□□□□ -0.28
CDKN1A-201ENST00000244741 COMPP49747 757 aaPredicted RBP13.3□□□□□ -0.28
CDKN1A-201ENST00000244741 ZNF329Q86UD4 541 aa13.3□□□□□ -0.28
CDKN1A-201ENST00000244741 NHLRC2Q8NBF2 726 aa13.3□□□□□ -0.28
CDKN1A-201ENST00000244741 FAM103A1Q9BTL3 118 aaKnown RBP13.3□□□□□ -0.28
CDKN1A-201ENST00000244741 ESM1Q9NQ30 184 aa13.3□□□□□ -0.28
CDKN1A-201ENST00000244741 TP53TG3Q9ULZ0 132 aa13.3□□□□□ -0.28
CDKN1A-201ENST00000244741 SPINK4O60575 86 aa13.29□□□□□ -0.28
CDKN1A-201ENST00000244741 AMY1AP04745 511 aa13.29□□□□□ -0.28
CDKN1A-201ENST00000244741 BLCAPP62952 87 aa13.29□□□□□ -0.28
CDKN1A-201ENST00000244741 DEFA6Q01524 100 aa13.29□□□□□ -0.28
CDKN1A-201ENST00000244741 ETFRF1Q6IPR1 90 aa13.29□□□□□ -0.28
CDKN1A-201ENST00000244741 Q6ZS46 218 aa13.29□□□□□ -0.28
CDKN1A-201ENST00000244741 LINC01548A6NM66 108 aa13.28□□□□□ -0.28
CDKN1A-201ENST00000244741 TCL1AP56279 114 aa13.28□□□□□ -0.28
CDKN1A-201ENST00000244741 ASPHD1Q5U4P2 390 aa13.28□□□□□ -0.28
CDKN1A-201ENST00000244741 RASL11BQ9BPW5 248 aa13.28□□□□□ -0.28
CDKN1A-201ENST00000244741 HSPB9Q9BQS6 159 aa13.28□□□□□ -0.28
CDKN1A-201ENST00000244741 SNURFLB1AK76 121 aa13.28□□□□□ -0.28
CDKN1A-201ENST00000244741 TSTD3H0UI37 97 aa13.28□□□□□ -0.28
CDKN1A-201ENST00000244741 CNIH1O95406 144 aa13.28□□□□□ -0.28
CDKN1A-201ENST00000244741 DDTP30046 118 aa13.28□□□□□ -0.28
CDKN1A-201ENST00000244741 TAS2R60P59551 318 aa13.28□□□□□ -0.28
CDKN1A-201ENST00000244741 CX3CL1P78423 397 aa13.28□□□□□ -0.28
CDKN1A-201ENST00000244741 SRSF2Q01130 221 aaKnown RBP13.28□□□□□ -0.28
CDKN1A-201ENST00000244741 IBA57Q5T440 356 aaKnown RBP13.28□□□□□ -0.28
CDKN1A-201ENST00000244741 ZNF664Q8N3J9 261 aa13.28□□□□□ -0.28
CDKN1A-201ENST00000244741 C5orf56Q8N8D9 126 aa13.28□□□□□ -0.28
CDKN1A-201ENST00000244741 OR1B1Q8NGR6 318 aa13.28□□□□□ -0.28
CDKN1A-201ENST00000244741 C1RLQ9NZP8 487 aa13.28□□□□□ -0.28
CDKN1A-201ENST00000244741 VPREB3Q9UKI3 123 aa13.28□□□□□ -0.28
CDKN1A-201ENST00000244741 MOB4Q9Y3A3 225 aa13.28□□□□□ -0.28
CDKN1A-201ENST00000244741 TRAV34A0A0B4J273 112 aa13.27□□□□□ -0.28
CDKN1A-201ENST00000244741 DNAJC9-AS1A6NH13 148 aa13.27□□□□□ -0.28
CDKN1A-201ENST00000244741 TEX22C9J3V5 150 aa13.27□□□□□ -0.28
CDKN1A-201ENST00000244741 LINC00310P59036 64 aa13.27□□□□□ -0.28
CDKN1A-201ENST00000244741 SLC35B1P78383 322 aa13.27□□□□□ -0.28
CDKN1A-201ENST00000244741 TMEM116Q8NCL8 245 aa13.27□□□□□ -0.28
CDKN1A-201ENST00000244741 C14orf144Q96I85 54 aa13.27□□□□□ -0.28
CDKN1A-201ENST00000244741 TRGV9Q99603 122 aa13.27□□□□□ -0.28
CDKN1A-201ENST00000244741 PEX7O00628 323 aa13.27□□□□□ -0.29
CDKN1A-201ENST00000244741 GATCO43716 136 aaKnown RBP13.27□□□□□ -0.29
CDKN1A-201ENST00000244741 CRISP2P16562 243 aa13.27□□□□□ -0.29
CDKN1A-201ENST00000244741 NDPQ00604 133 aa13.27□□□□□ -0.29
CDKN1A-201ENST00000244741 GNB1LQ9BYB4 327 aa13.27□□□□□ -0.29
CDKN1A-201ENST00000244741 SERTAD4Q9NUC0 356 aa13.27□□□□□ -0.29
CDKN1A-201ENST00000244741 MYCNOSP40205 109 aa13.26□□□□□ -0.29
CDKN1A-201ENST00000244741 RANP62826 216 aaKnown RBP13.26□□□□□ -0.29
CDKN1A-201ENST00000244741 CMTM2Q8TAZ6 248 aa13.26□□□□□ -0.29
CDKN1A-201ENST00000244741 LINC00527Q9UJ94 153 aa13.26□□□□□ -0.29
CDKN1A-201ENST00000244741 TRBV9A0A0B4J1U6 114 aa13.25□□□□□ -0.29
CDKN1A-201ENST00000244741 SMIM27A0A1W2PRY6 76 aa13.25□□□□□ -0.29
CDKN1A-201ENST00000244741 CA1P00915 261 aaPredicted RBP13.25□□□□□ -0.29
CDKN1A-201ENST00000244741 GNG5P63218 68 aa13.25□□□□□ -0.29
CDKN1A-201ENST00000244741 F11RQ9Y624 299 aaKnown RBP13.25□□□□□ -0.29
CDKN1A-201ENST00000244741 IGHV7-81A0A0B4J1V7 117 aa13.25□□□□□ -0.29
CDKN1A-201ENST00000244741 F2Z2F3 143 aa13.25□□□□□ -0.29
CDKN1A-201ENST00000244741 BAGE2Q86Y30 109 aa13.25□□□□□ -0.29
CDKN1A-201ENST00000244741 BLNKQ8WV28 456 aa13.25□□□□□ -0.29
CDKN1A-201ENST00000244741 SERF1AO75920 110 aa13.24□□□□□ -0.29
CDKN1A-201ENST00000244741 TMEM136Q6ZRR5 245 aa13.24□□□□□ -0.29
CDKN1A-201ENST00000244741 LURAP1LQ8IV03 231 aa13.24□□□□□ -0.29
CDKN1A-201ENST00000244741 SRSF12Q8WXF0 261 aaKnown RBP13.24□□□□□ -0.29
CDKN1A-201ENST00000244741 HYPMO75409 117 aa13.24□□□□□ -0.29
CDKN1A-201ENST00000244741 CRLF1O75462 422 aa13.24□□□□□ -0.29
CDKN1A-201ENST00000244741 RAB4BP61018 213 aa13.24□□□□□ -0.29
CDKN1A-201ENST00000244741 TMEM95Q3KNT9 176 aa13.24□□□□□ -0.29
CDKN1A-201ENST00000244741 MS4A10Q96PG2 267 aa13.24□□□□□ -0.29
CDKN1A-201ENST00000244741 NAT8BQ9UHF3 227 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms