RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 A8MWL6 223 aa11.4□□□□□ -0.58
HIF3A-202ENST00000244303 HSBP1O75506 76 aa11.4□□□□□ -0.58
HIF3A-202ENST00000244303 HINT1P49773 126 aaPredicted RBP11.4□□□□□ -0.58
HIF3A-202ENST00000244303 PTTG1IPP53801 180 aa11.4□□□□□ -0.58
HIF3A-202ENST00000244303 EXOC3-AS1Q8N2X6 119 aa11.4□□□□□ -0.58
HIF3A-202ENST00000244303 ZNF492Q9P255 531 aa11.4□□□□□ -0.58
HIF3A-202ENST00000244303 TIMM23O14925 209 aa11.4□□□□□ -0.58
HIF3A-202ENST00000244303 TOX4O94842 621 aa11.4□□□□□ -0.58
HIF3A-202ENST00000244303 NDUFB8O95169 186 aa11.4□□□□□ -0.58
HIF3A-202ENST00000244303 CNIH1O95406 144 aa11.4□□□□□ -0.58
HIF3A-202ENST00000244303 HBBP68871 147 aa11.4□□□□□ -0.58
HIF3A-202ENST00000244303 PMCHL1Q16048 86 aa11.4□□□□□ -0.58
HIF3A-202ENST00000244303 MAJINQ3KP22 176 aa11.4□□□□□ -0.58
HIF3A-202ENST00000244303 CT83Q5H943 113 aa11.4□□□□□ -0.58
HIF3A-202ENST00000244303 LCN12Q6JVE5 192 aa11.4□□□□□ -0.58
HIF3A-202ENST00000244303 RNASEKQ6P5S7 137 aaKnown RBP11.4□□□□□ -0.58
HIF3A-202ENST00000244303 OR8B3Q8NGG8 313 aa11.4□□□□□ -0.58
HIF3A-202ENST00000244303 OR8B2Q96RD0 313 aa11.4□□□□□ -0.58
HIF3A-202ENST00000244303 OTORQ9NRC9 128 aa11.4□□□□□ -0.58
HIF3A-202ENST00000244303 M0R2Z0 102 aa11.39□□□□□ -0.59
HIF3A-202ENST00000244303 LY6HO94772 140 aa11.39□□□□□ -0.59
HIF3A-202ENST00000244303 IGKV1-17P01599 117 aa11.39□□□□□ -0.59
HIF3A-202ENST00000244303 Q86TA4 180 aa11.39□□□□□ -0.59
HIF3A-202ENST00000244303 PGLYRP4Q96LB8 373 aa11.39□□□□□ -0.59
HIF3A-202ENST00000244303 TMEM14CQ9P0S9 112 aa11.39□□□□□ -0.59
HIF3A-202ENST00000244303 ABCA4P78363 2273 aa11.39□□□□□ -0.59
HIF3A-202ENST00000244303 SPTA1P02549 2419 aa11.39□□□□□ -0.59
HIF3A-202ENST00000244303 CD24P25063 80 aa11.39□□□□□ -0.59
HIF3A-202ENST00000244303 Q71RC1 249 aaPredicted RBP11.39□□□□□ -0.59
HIF3A-202ENST00000244303 CIARTQ8N365 385 aaPredicted RBP11.39□□□□□ -0.59
HIF3A-202ENST00000244303 IGFBPL1Q8WX77 278 aa11.39□□□□□ -0.59
HIF3A-202ENST00000244303 DAZAP1Q96EP5 407 aaKnown RBP11.39□□□□□ -0.59
HIF3A-202ENST00000244303 RNF5Q99942 180 aa11.39□□□□□ -0.59
HIF3A-202ENST00000244303 ANKHD1Q8IWZ3 2542 aaKnown RBP11.39□□□□□ -0.59
HIF3A-202ENST00000244303 K7EIM0 57 aa11.38□□□□□ -0.59
HIF3A-202ENST00000244303 LIPFP07098 398 aa11.38□□□□□ -0.59
HIF3A-202ENST00000244303 TSPOP30536 169 aa11.38□□□□□ -0.59
HIF3A-202ENST00000244303 Q56UQ5 140 aa11.38□□□□□ -0.59
HIF3A-202ENST00000244303 GOLT1AQ6ZVE7 132 aa11.38□□□□□ -0.59
HIF3A-202ENST00000244303 FAM181BA6NEQ2 426 aa11.38□□□□□ -0.59
HIF3A-202ENST00000244303 IGLV2-11P01706 119 aa11.38□□□□□ -0.59
HIF3A-202ENST00000244303 PRNTQ86SH4 94 aa11.38□□□□□ -0.59
HIF3A-202ENST00000244303 LY6G5BQ8NDX9 201 aa11.38□□□□□ -0.59
HIF3A-202ENST00000244303 ORAOV1Q8WV07 137 aa11.38□□□□□ -0.59
HIF3A-202ENST00000244303 HILPDAQ9Y5L2 63 aa11.38□□□□□ -0.59
HIF3A-202ENST00000244303 COL8A1P27658 744 aa11.37□□□□□ -0.59
HIF3A-202ENST00000244303 ARF6P62330 175 aa11.37□□□□□ -0.59
HIF3A-202ENST00000244303 EBLN2Q6P2I7 272 aa11.37□□□□□ -0.59
HIF3A-202ENST00000244303 URB1-AS1Q96HZ7 61 aa11.37□□□□□ -0.59
HIF3A-202ENST00000244303 SRSF8Q9BRL6 282 aaKnown RBP11.37□□□□□ -0.59
HIF3A-202ENST00000244303 NPIPB6E9PJ23 425 aa11.37□□□□□ -0.59
HIF3A-202ENST00000244303 HTR1DP28221 377 aa11.37□□□□□ -0.59
HIF3A-202ENST00000244303 FOXA3P55318 350 aaPredicted RBP11.37□□□□□ -0.59
HIF3A-202ENST00000244303 RBPMS2Q6ZRY4 209 aaKnown RBP11.37□□□□□ -0.59
HIF3A-202ENST00000244303 C17orf77Q96MU5 243 aa11.37□□□□□ -0.59
HIF3A-202ENST00000244303 GFRA4Q9GZZ7 299 aa11.37□□□□□ -0.59
HIF3A-202ENST00000244303 SOX21Q9Y651 276 aaPredicted RBP11.37□□□□□ -0.59
HIF3A-202ENST00000244303 CCL25O15444 150 aa11.36□□□□□ -0.59
HIF3A-202ENST00000244303 NBR2O15453 112 aa11.36□□□□□ -0.59
HIF3A-202ENST00000244303 PRB4P10163 310 aaPredicted RBP11.36□□□□□ -0.59
HIF3A-202ENST00000244303 HOXB4P17483 251 aaPredicted RBP11.36□□□□□ -0.59
HIF3A-202ENST00000244303 UNQ5815/PRO19632Q6UWF5 114 aa11.36□□□□□ -0.59
HIF3A-202ENST00000244303 MRPS16Q9Y3D3 137 aaKnown RBP11.36□□□□□ -0.59
HIF3A-202ENST00000244303 TRAV9-2A0A087WT02 112 aa11.35□□□□□ -0.59
HIF3A-202ENST00000244303 M0QZ24 198 aa11.35□□□□□ -0.59
HIF3A-202ENST00000244303 KLRD1Q13241 179 aa11.35□□□□□ -0.59
HIF3A-202ENST00000244303 FBLN7Q53RD9 439 aa11.35□□□□□ -0.59
HIF3A-202ENST00000244303 Q6ZVH6 145 aa11.35□□□□□ -0.59
HIF3A-202ENST00000244303 ZNF738Q8NE65 137 aa11.35□□□□□ -0.59
HIF3A-202ENST00000244303 CFHR4Q92496 578 aa11.35□□□□□ -0.59
HIF3A-202ENST00000244303 SHANK2-AS3Q9BTD1 123 aa11.35□□□□□ -0.59
HIF3A-202ENST00000244303 DPM3Q9P2X0 92 aa11.35□□□□□ -0.59
HIF3A-202ENST00000244303 S4R3C0 116 aa11.35□□□□□ -0.59
HIF3A-202ENST00000244303 HRNRQ86YZ3 2850 aaPredicted RBP11.35□□□□□ -0.59
HIF3A-202ENST00000244303 TRBV19A0A075B6N1 114 aa11.35□□□□□ -0.59
HIF3A-202ENST00000244303 H3BRN7 92 aa11.35□□□□□ -0.59
HIF3A-202ENST00000244303 KLF17Q5JT82 389 aaPredicted RBP11.35□□□□□ -0.59
HIF3A-202ENST00000244303 BPIFA4PQ86YQ2 179 aa11.35□□□□□ -0.59
HIF3A-202ENST00000244303 ZNF491Q8N8L2 437 aa11.35□□□□□ -0.59
HIF3A-202ENST00000244303 ASCL2Q99929 193 aa11.35□□□□□ -0.59
HIF3A-202ENST00000244303 C2orf70A6NJV1 201 aa11.34□□□□□ -0.59
HIF3A-202ENST00000244303 SH2D7A6NKC9 451 aaPredicted RBP11.34□□□□□ -0.59
HIF3A-202ENST00000244303 KIR3DL3Q8N743 410 aa11.34□□□□□ -0.59
HIF3A-202ENST00000244303 OR4F17Q8NGA8 305 aa11.34□□□□□ -0.59
HIF3A-202ENST00000244303 OR11H6Q8NGC7 330 aa11.34□□□□□ -0.59
HIF3A-202ENST00000244303 RAB1BQ9H0U4 201 aa11.34□□□□□ -0.59
HIF3A-202ENST00000244303 COX11Q9Y6N1 276 aa11.34□□□□□ -0.59
HIF3A-202ENST00000244303 A0A1W2PRD5 423 aa11.34□□□□□ -0.59
HIF3A-202ENST00000244303 A0A1W2PRF3 423 aa11.34□□□□□ -0.59
HIF3A-202ENST00000244303 A0A1W2PRM7 423 aa11.34□□□□□ -0.59
HIF3A-202ENST00000244303 FAM231BA6NCW3 169 aa11.34□□□□□ -0.59
HIF3A-202ENST00000244303 IL4P05112 153 aa11.34□□□□□ -0.59
HIF3A-202ENST00000244303 RNF125Q96EQ8 232 aa11.34□□□□□ -0.59
HIF3A-202ENST00000244303 ZC2HC1AQ96GY0 325 aa11.34□□□□□ -0.59
HIF3A-202ENST00000244303 CLEC5AQ9NY25 188 aa11.34□□□□□ -0.59
HIF3A-202ENST00000244303 ZNF785A8K8V0 405 aa11.33□□□□□ -0.6
HIF3A-202ENST00000244303 NDUFA3O95167 84 aa11.33□□□□□ -0.6
HIF3A-202ENST00000244303 HLA-DRB1P01911 266 aa11.33□□□□□ -0.6
HIF3A-202ENST00000244303 UBE2V1Q13404 147 aa11.33□□□□□ -0.6
HIF3A-202ENST00000244303 HES1Q14469 280 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms