RNA–Protein interactions for RNA: ENST00000243103.3

HOXC12-201, Transcript of homeobox C12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC12, Length 3,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12-201ENST00000243103 UFC1Q9Y3C8 167 aa12.16□□□□□ -0.46
HOXC12-201ENST00000243103 CELSR1Q9NYQ6 3014 aa12.15□□□□□ -0.46
HOXC12-201ENST00000243103 D6R8Y8 96 aa12.15□□□□□ -0.46
HOXC12-201ENST00000243103 HERV-K104P63124 156 aa12.15□□□□□ -0.46
HOXC12-201ENST00000243103 IL11RAQ14626 422 aa12.15□□□□□ -0.46
HOXC12-201ENST00000243103 COX19Q49B96 90 aa12.15□□□□□ -0.46
HOXC12-201ENST00000243103 ZNF479Q96JC4 524 aa12.15□□□□□ -0.46
HOXC12-201ENST00000243103 RPP21Q9H633 154 aaKnown RBP12.15□□□□□ -0.46
HOXC12-201ENST00000243103 INSIG2Q9Y5U4 225 aa12.15□□□□□ -0.46
HOXC12-201ENST00000243103 TMEM213A2RRL7 107 aa12.15□□□□□ -0.46
HOXC12-201ENST00000243103 C9orf172C9J069 976 aa12.15□□□□□ -0.46
HOXC12-201ENST00000243103 APOMO95445 188 aa12.15□□□□□ -0.46
HOXC12-201ENST00000243103 CT45A6P0DMU7 189 aa12.15□□□□□ -0.46
HOXC12-201ENST00000243103 CT45A5P0DMU8 189 aa12.15□□□□□ -0.46
HOXC12-201ENST00000243103 CT45A7P0DMV0 189 aa12.15□□□□□ -0.46
HOXC12-201ENST00000243103 KIR2DL2P43627 348 aaPredicted RBP12.15□□□□□ -0.46
HOXC12-201ENST00000243103 CT45A1Q5HYN5 189 aa12.15□□□□□ -0.46
HOXC12-201ENST00000243103 AMN1Q8IY45 258 aa12.15□□□□□ -0.46
HOXC12-201ENST00000243103 CT45A3Q8NHU0 189 aa12.15□□□□□ -0.46
HOXC12-201ENST00000243103 ZNF48Q96MX3 618 aaPredicted RBP12.15□□□□□ -0.46
HOXC12-201ENST00000243103 ANAPC13Q9BS18 74 aa12.15□□□□□ -0.46
HOXC12-201ENST00000243103 CEP192Q8TEP8 1941 aa12.15□□□□□ -0.46
HOXC12-201ENST00000243103 TMEM164Q5U3C3 297 aa12.14□□□□□ -0.47
HOXC12-201ENST00000243103 SMAD7O15105 426 aaKnown RBP12.14□□□□□ -0.47
HOXC12-201ENST00000243103 DUX4L9Q6RFH8 374 aaPredicted RBP12.14□□□□□ -0.47
HOXC12-201ENST00000243103 PET117Q6UWS5 81 aa12.14□□□□□ -0.47
HOXC12-201ENST00000243103 HIST1H4GQ99525 98 aa12.14□□□□□ -0.47
HOXC12-201ENST00000243103 SLC25A33Q9BSK2 321 aa12.14□□□□□ -0.47
HOXC12-201ENST00000243103 VDAC2P45880 294 aaPredicted RBP12.14□□□□□ -0.47
HOXC12-201ENST00000243103 C1orf229Q6ZS94 237 aaPredicted RBP12.14□□□□□ -0.47
HOXC12-201ENST00000243103 MOB1BQ7L9L4 216 aa12.14□□□□□ -0.47
HOXC12-201ENST00000243103 NEGR1Q7Z3B1 354 aa12.14□□□□□ -0.47
HOXC12-201ENST00000243103 IGKV2D-26A0A0A0MRZ7 120 aa12.13□□□□□ -0.47
HOXC12-201ENST00000243103 PSMB11A5LHX3 300 aa12.13□□□□□ -0.47
HOXC12-201ENST00000243103 COL4A2P08572 1712 aa12.13□□□□□ -0.47
HOXC12-201ENST00000243103 EXPH5Q8NEV8 1989 aa12.13□□□□□ -0.47
HOXC12-201ENST00000243103 A0A1W2PNU3 283 aaPredicted RBP12.13□□□□□ -0.47
HOXC12-201ENST00000243103 LYZP61626 148 aa12.13□□□□□ -0.47
HOXC12-201ENST00000243103 C11orf52Q96A22 123 aa12.13□□□□□ -0.47
HOXC12-201ENST00000243103 VGLL1Q99990 258 aa12.13□□□□□ -0.47
HOXC12-201ENST00000243103 ZNF747Q9BV97 191 aa12.13□□□□□ -0.47
HOXC12-201ENST00000243103 MGST3O14880 152 aa12.13□□□□□ -0.47
HOXC12-201ENST00000243103 PSMB2P49721 201 aa12.13□□□□□ -0.47
HOXC12-201ENST00000243103 SPRNQ5BIV9 151 aa12.13□□□□□ -0.47
HOXC12-201ENST00000243103 PRTN3P24158 256 aa12.12□□□□□ -0.47
HOXC12-201ENST00000243103 HSPE1P61604 102 aaKnown RBP12.12□□□□□ -0.47
HOXC12-201ENST00000243103 SRSF9Q13242 221 aaKnown RBP eCLIP12.12□□□□□ -0.47
HOXC12-201ENST00000243103 COLCA1Q6ZS62 124 aa12.12□□□□□ -0.47
HOXC12-201ENST00000243103 IGF2BP2-AS1Q96M15 143 aa12.12□□□□□ -0.47
HOXC12-201ENST00000243103 DCHS2Q6V1P9 2916 aa12.12□□□□□ -0.47
HOXC12-201ENST00000243103 TLN2Q9Y4G6 2542 aa12.12□□□□□ -0.47
HOXC12-201ENST00000243103 IGHV3-35A0A0C4DH35 117 aa12.12□□□□□ -0.47
HOXC12-201ENST00000243103 GAGE13Q4V321 117 aa12.12□□□□□ -0.47
HOXC12-201ENST00000243103 TMEM178AQ8NBL3 297 aa12.12□□□□□ -0.47
HOXC12-201ENST00000243103 DKK1O94907 266 aa12.11□□□□□ -0.47
HOXC12-201ENST00000243103 RPRMLQ8N4K4 120 aa12.11□□□□□ -0.47
HOXC12-201ENST00000243103 OR5A1Q8NGJ0 315 aa12.11□□□□□ -0.47
HOXC12-201ENST00000243103 RNF138Q8WVD3 245 aa12.11□□□□□ -0.47
HOXC12-201ENST00000243103 NDUFA3O95167 84 aa12.11□□□□□ -0.47
HOXC12-201ENST00000243103 BOD1L2Q8IYS8 172 aa12.11□□□□□ -0.47
HOXC12-201ENST00000243103 FOXC2Q99958 501 aa12.11□□□□□ -0.47
HOXC12-201ENST00000243103 ARL3P36405 182 aa12.1□□□□□ -0.47
HOXC12-201ENST00000243103 IGFL4Q6B9Z1 124 aa12.1□□□□□ -0.47
HOXC12-201ENST00000243103 ZNF329Q86UD4 541 aa12.1□□□□□ -0.47
HOXC12-201ENST00000243103 RPUSD1Q9UJJ7 312 aaKnown RBP12.1□□□□□ -0.47
HOXC12-201ENST00000243103 CYSLTR1Q9Y271 337 aa12.1□□□□□ -0.47
HOXC12-201ENST00000243103 LINC01548A6NM66 108 aa12.1□□□□□ -0.47
HOXC12-201ENST00000243103 OSR1Q8TAX0 266 aaPredicted RBP12.1□□□□□ -0.47
HOXC12-201ENST00000243103 SLC25A2Q9BXI2 301 aa12.1□□□□□ -0.47
HOXC12-201ENST00000243103 TRBV6-6A0A0A6YYG2 114 aa12.09□□□□□ -0.47
HOXC12-201ENST00000243103 P0C879 139 aa12.09□□□□□ -0.47
HOXC12-201ENST00000243103 RBPMS2Q6ZRY4 209 aaKnown RBP12.09□□□□□ -0.47
HOXC12-201ENST00000243103 CHAC1Q9BUX1 264 aa12.09□□□□□ -0.47
HOXC12-201ENST00000243103 ANKHD1Q8IWZ3 2542 aaKnown RBP12.09□□□□□ -0.47
HOXC12-201ENST00000243103 PTPN13Q12923 2485 aa12.09□□□□□ -0.47
HOXC12-201ENST00000243103 TRGV5A0A0B4J1U4 118 aa12.09□□□□□ -0.47
HOXC12-201ENST00000243103 TMEM238LA0A1B0GVL6 79 aa12.09□□□□□ -0.47
HOXC12-201ENST00000243103 M0R3E3 92 aa12.09□□□□□ -0.47
HOXC12-201ENST00000243103 LOXL3P58215 753 aa12.09□□□□□ -0.47
HOXC12-201ENST00000243103 FAM222BQ8WU58 562 aa12.09□□□□□ -0.47
HOXC12-201ENST00000243103 MS4A6AQ9H2W1 248 aa12.09□□□□□ -0.47
HOXC12-201ENST00000243103 MRPL36Q9P0J6 103 aaKnown RBP12.09□□□□□ -0.47
HOXC12-201ENST00000243103 EPDR1Q9UM22 224 aa12.09□□□□□ -0.47
HOXC12-201ENST00000243103 ZFYVE26Q68DK2 2539 aa12.09□□□□□ -0.47
HOXC12-201ENST00000243103 CSPG4Q6UVK1 2322 aa12.09□□□□□ -0.47
HOXC12-201ENST00000243103 PRSS29PA6NIE9 313 aa12.09□□□□□ -0.47
HOXC12-201ENST00000243103 FNDC10F2Z333 226 aa12.09□□□□□ -0.47
HOXC12-201ENST00000243103 J3KRW8 73 aa12.09□□□□□ -0.47
HOXC12-201ENST00000243103 CKS2P33552 79 aa12.09□□□□□ -0.47
HOXC12-201ENST00000243103 PPP1R35Q8TAP8 253 aa12.09□□□□□ -0.47
HOXC12-201ENST00000243103 SSUH2Q9Y2M2 353 aa12.09□□□□□ -0.47
HOXC12-201ENST00000243103 A0A1B0GW15 77 aa12.08□□□□□ -0.48
HOXC12-201ENST00000243103 M0R1B8 84 aa12.08□□□□□ -0.48
HOXC12-201ENST00000243103 PRR20EP86478 221 aa12.08□□□□□ -0.48
HOXC12-201ENST00000243103 PRR20CP86479 221 aa12.08□□□□□ -0.48
HOXC12-201ENST00000243103 PRR20DP86480 221 aa12.08□□□□□ -0.48
HOXC12-201ENST00000243103 PRR20BP86481 221 aa12.08□□□□□ -0.48
HOXC12-201ENST00000243103 PRR20AP86496 221 aa12.08□□□□□ -0.48
HOXC12-201ENST00000243103 KRTAP27-1Q3LI81 207 aa12.08□□□□□ -0.48
HOXC12-201ENST00000243103 ZC2HC1BQ5TFG8 222 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms