RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 ZCCHC24Q8N2G6 241 aaKnown RBP11.41□□□□□ -0.58
PCDHB3-201ENST00000231130 FAM167A-AS1Q96KT0 104 aa11.41□□□□□ -0.58
PCDHB3-201ENST00000231130 VGLL1Q99990 258 aa11.41□□□□□ -0.58
PCDHB3-201ENST00000231130 UPK2O00526 184 aa11.41□□□□□ -0.58
PCDHB3-201ENST00000231130 SMAD7O15105 426 aaKnown RBP11.41□□□□□ -0.58
PCDHB3-201ENST00000231130 CNIH1O95406 144 aa11.41□□□□□ -0.58
PCDHB3-201ENST00000231130 RNASE2P10153 161 aaKnown RBP11.41□□□□□ -0.58
PCDHB3-201ENST00000231130 KIR2DS2P43631 304 aa11.41□□□□□ -0.58
PCDHB3-201ENST00000231130 PDPNQ86YL7 162 aa11.41□□□□□ -0.58
PCDHB3-201ENST00000231130 WIPF2Q8TF74 440 aaPredicted RBP11.41□□□□□ -0.58
PCDHB3-201ENST00000231130 CSMD1Q96PZ7 3565 aa11.41□□□□□ -0.58
PCDHB3-201ENST00000231130 SPINK8P0C7L1 97 aa11.41□□□□□ -0.58
PCDHB3-201ENST00000231130 CT45A6P0DMU7 189 aa11.41□□□□□ -0.58
PCDHB3-201ENST00000231130 CT45A5P0DMU8 189 aa11.41□□□□□ -0.58
PCDHB3-201ENST00000231130 CT45A7P0DMV0 189 aa11.41□□□□□ -0.58
PCDHB3-201ENST00000231130 GATA3P23771 443 aa11.41□□□□□ -0.58
PCDHB3-201ENST00000231130 Q71RC1 249 aaPredicted RBP11.41□□□□□ -0.58
PCDHB3-201ENST00000231130 ZNF329Q86UD4 541 aa11.41□□□□□ -0.58
PCDHB3-201ENST00000231130 C9orf106Q8NAJ2 232 aa11.41□□□□□ -0.58
PCDHB3-201ENST00000231130 MRPL36Q9P0J6 103 aaKnown RBP11.41□□□□□ -0.58
PCDHB3-201ENST00000231130 ENSAO43768 121 aaKnown RBP11.4□□□□□ -0.58
PCDHB3-201ENST00000231130 FAM87AP0C7U9 286 aa11.4□□□□□ -0.58
PCDHB3-201ENST00000231130 ACP1P24666 158 aa11.4□□□□□ -0.58
PCDHB3-201ENST00000231130 DMXL1Q9Y485 3027 aa11.4□□□□□ -0.58
PCDHB3-201ENST00000231130 IGHV1-18A0A0C4DH31 117 aa11.4□□□□□ -0.58
PCDHB3-201ENST00000231130 ANXA2RQ3ZCQ2 193 aa11.4□□□□□ -0.58
PCDHB3-201ENST00000231130 LINC01545Q5VT33 79 aa11.4□□□□□ -0.58
PCDHB3-201ENST00000231130 SFTA2Q6UW10 78 aa11.4□□□□□ -0.58
PCDHB3-201ENST00000231130 LCNL1Q6ZST4 164 aa11.4□□□□□ -0.58
PCDHB3-201ENST00000231130 PATE2Q6UY27 113 aa11.39□□□□□ -0.59
PCDHB3-201ENST00000231130 MBD6Q96DN6 1003 aa11.39□□□□□ -0.59
PCDHB3-201ENST00000231130 COL8A1P27658 744 aa11.39□□□□□ -0.59
PCDHB3-201ENST00000231130 FXYD2P54710 66 aa11.39□□□□□ -0.59
PCDHB3-201ENST00000231130 DIAPH2-AS1Q14236 149 aa11.39□□□□□ -0.59
PCDHB3-201ENST00000231130 FAM169BQ8N8A8 192 aa11.39□□□□□ -0.59
PCDHB3-201ENST00000231130 C18orf15Q96N68 181 aa11.39□□□□□ -0.59
PCDHB3-201ENST00000231130 MRPL20Q9BYC9 149 aaKnown RBP11.39□□□□□ -0.59
PCDHB3-201ENST00000231130 IGKV3-15P01624 115 aa11.39□□□□□ -0.59
PCDHB3-201ENST00000231130 CCL3L1P16619 93 aa11.39□□□□□ -0.59
PCDHB3-201ENST00000231130 KIR2DL2P43627 348 aaPredicted RBP11.39□□□□□ -0.59
PCDHB3-201ENST00000231130 C20orf78Q9BR46 151 aa11.39□□□□□ -0.59
PCDHB3-201ENST00000231130 hADV38S2A0JD32 116 aa11.38□□□□□ -0.59
PCDHB3-201ENST00000231130 ZNF747Q9BV97 191 aa11.38□□□□□ -0.59
PCDHB3-201ENST00000231130 ARRDC1-AS1Q9H2J1 176 aa11.38□□□□□ -0.59
PCDHB3-201ENST00000231130 NKX2-8O15522 239 aa11.38□□□□□ -0.59
PCDHB3-201ENST00000231130 SRSF6Q13247 344 aaKnown RBP11.38□□□□□ -0.59
PCDHB3-201ENST00000231130 CIARTQ8N365 385 aaPredicted RBP11.38□□□□□ -0.59
PCDHB3-201ENST00000231130 OR4X2Q8NGF9 303 aa11.38□□□□□ -0.59
PCDHB3-201ENST00000231130 RPP21Q9H633 154 aaKnown RBP11.38□□□□□ -0.59
PCDHB3-201ENST00000231130 SSUH2Q9Y2M2 353 aa11.38□□□□□ -0.59
PCDHB3-201ENST00000231130 CCL8P80075 99 aa11.37□□□□□ -0.59
PCDHB3-201ENST00000231130 RUSC1-AS1Q66K80 236 aa11.37□□□□□ -0.59
PCDHB3-201ENST00000231130 GTSF1Q8WW33 167 aa11.37□□□□□ -0.59
PCDHB3-201ENST00000231130 RNF183Q96D59 192 aa11.37□□□□□ -0.59
PCDHB3-201ENST00000231130 ABCA4P78363 2273 aa11.37□□□□□ -0.59
PCDHB3-201ENST00000231130 B5MCH6 92 aa11.37□□□□□ -0.59
PCDHB3-201ENST00000231130 PRNTQ86SH4 94 aa11.37□□□□□ -0.59
PCDHB3-201ENST00000231130 MDS2Q8NDY4 140 aa11.37□□□□□ -0.59
PCDHB3-201ENST00000231130 MRPL16Q9NX20 251 aaKnown RBP11.37□□□□□ -0.59
PCDHB3-201ENST00000231130 EPDR1Q9UM22 224 aa11.37□□□□□ -0.59
PCDHB3-201ENST00000231130 TMSB15BA0A087X1C1 80 aa11.37□□□□□ -0.59
PCDHB3-201ENST00000231130 C19orf67A6NJJ6 358 aa11.37□□□□□ -0.59
PCDHB3-201ENST00000231130 FAM106CPP0CH98 169 aa11.37□□□□□ -0.59
PCDHB3-201ENST00000231130 DLX1P56177 255 aa11.37□□□□□ -0.59
PCDHB3-201ENST00000231130 FAM106AQ4KMX7 169 aa11.37□□□□□ -0.59
PCDHB3-201ENST00000231130 WT1-ASQ06250 92 aa11.36□□□□□ -0.59
PCDHB3-201ENST00000231130 ATP5L2Q7Z4Y8 100 aa11.36□□□□□ -0.59
PCDHB3-201ENST00000231130 TMEM178AQ8NBL3 297 aa11.36□□□□□ -0.59
PCDHB3-201ENST00000231130 SYT8Q8NBV8 401 aa11.36□□□□□ -0.59
PCDHB3-201ENST00000231130 OR9G4Q8NGQ1 327 aa11.36□□□□□ -0.59
PCDHB3-201ENST00000231130 ZNF414Q96IQ9 312 aa11.36□□□□□ -0.59
PCDHB3-201ENST00000231130 INSIG2Q9Y5U4 225 aa11.36□□□□□ -0.59
PCDHB3-201ENST00000231130 DLL1O00548 723 aa11.36□□□□□ -0.59
PCDHB3-201ENST00000231130 SHISA2Q6UWI4 295 aa11.36□□□□□ -0.59
PCDHB3-201ENST00000231130 FER1L6-AS2Q96M78 137 aa11.36□□□□□ -0.59
PCDHB3-201ENST00000231130 SPANXB1Q9NS25 103 aaPredicted RBP11.36□□□□□ -0.59
PCDHB3-201ENST00000231130 IFI27P40305 119 aaPredicted RBP11.36□□□□□ -0.59
PCDHB3-201ENST00000231130 GAGE13Q4V321 117 aa11.36□□□□□ -0.59
PCDHB3-201ENST00000231130 C2orf83Q53S99 150 aa11.36□□□□□ -0.59
PCDHB3-201ENST00000231130 OR1L8Q8NGR8 309 aa11.36□□□□□ -0.59
PCDHB3-201ENST00000231130 FXYD5Q96DB9 178 aa11.36□□□□□ -0.59
PCDHB3-201ENST00000231130 ZNF479Q96JC4 524 aa11.36□□□□□ -0.59
PCDHB3-201ENST00000231130 ANAPC13Q9BS18 74 aa11.36□□□□□ -0.59
PCDHB3-201ENST00000231130 SPTBN1Q01082 2364 aaKnown RBP11.36□□□□□ -0.59
PCDHB3-201ENST00000231130 ACACAQ13085 2346 aa11.35□□□□□ -0.59
PCDHB3-201ENST00000231130 GPR82Q96P67 336 aa11.35□□□□□ -0.59
PCDHB3-201ENST00000231130 TPSG1Q9NRR2 321 aa11.35□□□□□ -0.59
PCDHB3-201ENST00000231130 RBPMS2Q6ZRY4 209 aaKnown RBP11.35□□□□□ -0.59
PCDHB3-201ENST00000231130 EXOC3-AS1Q8N2X6 119 aa11.35□□□□□ -0.59
PCDHB3-201ENST00000231130 OR10X1Q8NGY0 326 aa11.35□□□□□ -0.59
PCDHB3-201ENST00000231130 APOMO95445 188 aa11.34□□□□□ -0.59
PCDHB3-201ENST00000231130 LOXL1Q08397 574 aaPredicted RBP11.34□□□□□ -0.59
PCDHB3-201ENST00000231130 BOD1L2Q8IYS8 172 aa11.34□□□□□ -0.59
PCDHB3-201ENST00000231130 OR1L4Q8NGR5 311 aa11.34□□□□□ -0.59
PCDHB3-201ENST00000231130 MRPL32Q9BYC8 188 aaKnown RBP11.34□□□□□ -0.59
PCDHB3-201ENST00000231130 RIF1Q5UIP0 2472 aaKnown RBP11.34□□□□□ -0.59
PCDHB3-201ENST00000231130 FGF6P10767 208 aa11.34□□□□□ -0.59
PCDHB3-201ENST00000231130 GOLT1AQ6ZVE7 132 aa11.34□□□□□ -0.59
PCDHB3-201ENST00000231130 SPTA1P02549 2419 aa11.34□□□□□ -0.59
PCDHB3-201ENST00000231130 HERV-K104P63124 156 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms