RNA–Protein interactions for RNA: ENST00000222345.10

SIPA1L3-201, Transcript of signal induced proliferation associated 1 like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1L3, Length 7,987 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3-201ENST00000222345 TCF15Q12870 199 aa11.34□□□□□ -0.59
SIPA1L3-201ENST00000222345 CLEC19AQ6UXS0 136 aa11.34□□□□□ -0.59
SIPA1L3-201ENST00000222345 NCR2O95944 276 aa11.34□□□□□ -0.59
SIPA1L3-201ENST00000222345 LINC01545Q5VT33 79 aa11.34□□□□□ -0.59
SIPA1L3-201ENST00000222345 VGLL1Q99990 258 aa11.34□□□□□ -0.59
SIPA1L3-201ENST00000222345 Q6ZWC4 215 aa11.34□□□□□ -0.59
SIPA1L3-201ENST00000222345 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.34□□□□□ -0.59
SIPA1L3-201ENST00000222345 LY6G5BQ8NDX9 201 aa11.34□□□□□ -0.59
SIPA1L3-201ENST00000222345 SCRT1Q9BWW7 348 aa11.34□□□□□ -0.59
SIPA1L3-201ENST00000222345 TMEM131Q92545 1883 aa11.33□□□□□ -0.59
SIPA1L3-201ENST00000222345 SELENOKQ9Y6D0 94 aa11.33□□□□□ -0.6
SIPA1L3-201ENST00000222345 PDE6HQ13956 83 aa11.33□□□□□ -0.6
SIPA1L3-201ENST00000222345 EFEMP2O95967 443 aa11.33□□□□□ -0.6
SIPA1L3-201ENST00000222345 DCTN5Q9BTE1 182 aa11.33□□□□□ -0.6
SIPA1L3-201ENST00000222345 ZNF114Q8NC26 417 aa11.33□□□□□ -0.6
SIPA1L3-201ENST00000222345 ZNF138P52744 262 aa11.33□□□□□ -0.6
SIPA1L3-201ENST00000222345 STPG4Q8N801 248 aa11.33□□□□□ -0.6
SIPA1L3-201ENST00000222345 PFN1P07737 140 aaKnown RBP11.33□□□□□ -0.6
SIPA1L3-201ENST00000222345 FGF6P10767 208 aa11.33□□□□□ -0.6
SIPA1L3-201ENST00000222345 CENPVQ7Z7K6 275 aaPredicted RBP11.33□□□□□ -0.6
SIPA1L3-201ENST00000222345 AMN1Q8IY45 258 aa11.33□□□□□ -0.6
SIPA1L3-201ENST00000222345 LINC00477Q96M19 166 aa11.33□□□□□ -0.6
SIPA1L3-201ENST00000222345 MRPS18CQ9Y3D5 142 aaKnown RBP11.33□□□□□ -0.6
SIPA1L3-201ENST00000222345 IGHV3-23P01764 117 aa11.32□□□□□ -0.6
SIPA1L3-201ENST00000222345 TMEM75Q8N9X5 138 aa11.32□□□□□ -0.6
SIPA1L3-201ENST00000222345 MBNL3Q9NUK0 354 aaKnown RBP11.32□□□□□ -0.6
SIPA1L3-201ENST00000222345 ZNF492Q9P255 531 aa11.32□□□□□ -0.6
SIPA1L3-201ENST00000222345 ERCC8Q13216 396 aa11.32□□□□□ -0.6
SIPA1L3-201ENST00000222345 ITLN2Q8WWU7 325 aaPredicted RBP11.32□□□□□ -0.6
SIPA1L3-201ENST00000222345 IGHV3-35A0A0C4DH35 117 aa11.32□□□□□ -0.6
SIPA1L3-201ENST00000222345 KIR2DL5BA0A0G2JN68 375 aa11.32□□□□□ -0.6
SIPA1L3-201ENST00000222345 KIR2DL5BA0A0G2JPC4 375 aa11.32□□□□□ -0.6
SIPA1L3-201ENST00000222345 SH2D1AO60880 128 aa11.32□□□□□ -0.6
SIPA1L3-201ENST00000222345 KIR2DL5AQ8N109 375 aa11.32□□□□□ -0.6
SIPA1L3-201ENST00000222345 NHSL1Q5SYE7 1610 aa11.32□□□□□ -0.6
SIPA1L3-201ENST00000222345 ATOX1O00244 68 aa11.31□□□□□ -0.6
SIPA1L3-201ENST00000222345 GAS1P54826 345 aa11.31□□□□□ -0.6
SIPA1L3-201ENST00000222345 UCNP55089 124 aa11.31□□□□□ -0.6
SIPA1L3-201ENST00000222345 PRADC1Q9BSG0 188 aa11.31□□□□□ -0.6
SIPA1L3-201ENST00000222345 TRAV40A0A0B4J280 105 aa11.31□□□□□ -0.6
SIPA1L3-201ENST00000222345 C4orf51C9J302 202 aa11.31□□□□□ -0.6
SIPA1L3-201ENST00000222345 DSCR8Q96T75 97 aa11.31□□□□□ -0.6
SIPA1L3-201ENST00000222345 TICRRQ7Z2Z1 1910 aa11.31□□□□□ -0.6
SIPA1L3-201ENST00000222345 IGHV3-49A0A0A0MS15 119 aa11.31□□□□□ -0.6
SIPA1L3-201ENST00000222345 SMIM20Q8N5G0 67 aa11.31□□□□□ -0.6
SIPA1L3-201ENST00000222345 YPEL3P61236 119 aaPredicted RBP11.31□□□□□ -0.6
SIPA1L3-201ENST00000222345 CCL19Q99731 98 aa11.31□□□□□ -0.6
SIPA1L3-201ENST00000222345 IGHV3OR16-13A0A075B7E8 117 aa11.3□□□□□ -0.6
SIPA1L3-201ENST00000222345 IGHV3-74A0A0B4J1X5 117 aa11.3□□□□□ -0.6
SIPA1L3-201ENST00000222345 VWA8A3KMH1 1905 aa11.3□□□□□ -0.6
SIPA1L3-201ENST00000222345 H3BMG7 143 aa11.3□□□□□ -0.6
SIPA1L3-201ENST00000222345 RPL32P62910 135 aaKnown RBP11.3□□□□□ -0.6
SIPA1L3-201ENST00000222345 LY6EQ16553 131 aa11.3□□□□□ -0.6
SIPA1L3-201ENST00000222345 Q6ZS49 121 aa11.3□□□□□ -0.6
SIPA1L3-201ENST00000222345 KLF2Q9Y5W3 355 aaPredicted RBP11.3□□□□□ -0.6
SIPA1L3-201ENST00000222345 PMS2P5A8MQ11 134 aa11.3□□□□□ -0.6
SIPA1L3-201ENST00000222345 APOBEC3AP31941 199 aaPredicted RBP11.3□□□□□ -0.6
SIPA1L3-201ENST00000222345 SMIM27A0A1W2PRY6 76 aa11.3□□□□□ -0.6
SIPA1L3-201ENST00000222345 LILRA1O75019 489 aa11.3□□□□□ -0.6
SIPA1L3-201ENST00000222345 MST1LQ2TV78 715 aa11.3□□□□□ -0.6
SIPA1L3-201ENST00000222345 ZNF329Q86UD4 541 aa11.3□□□□□ -0.6
SIPA1L3-201ENST00000222345 STHQ8IWL8 128 aa11.3□□□□□ -0.6
SIPA1L3-201ENST00000222345 A0A0U1RRA0 63 aa11.3□□□□□ -0.6
SIPA1L3-201ENST00000222345 COX6A1P12074 109 aa11.3□□□□□ -0.6
SIPA1L3-201ENST00000222345 TRBV6-6A0A0A6YYG2 114 aa11.29□□□□□ -0.6
SIPA1L3-201ENST00000222345 IGLL1P15814 213 aa11.29□□□□□ -0.6
SIPA1L3-201ENST00000222345 PRIMA1Q86XR5 153 aa11.29□□□□□ -0.6
SIPA1L3-201ENST00000222345 NOTCH3Q9UM47 2321 aa11.29□□□□□ -0.6
SIPA1L3-201ENST00000222345 C15orf53Q8NAA6 179 aa11.29□□□□□ -0.6
SIPA1L3-201ENST00000222345 TCTEX1D4Q5JR98 221 aa11.29□□□□□ -0.6
SIPA1L3-201ENST00000222345 MRPL14Q6P1L8 145 aaKnown RBP11.29□□□□□ -0.6
SIPA1L3-201ENST00000222345 ATRXP46100 2492 aa11.29□□□□□ -0.6
SIPA1L3-201ENST00000222345 PPIFP30405 207 aaKnown RBP11.29□□□□□ -0.6
SIPA1L3-201ENST00000222345 LSM4Q9Y4Z0 139 aaKnown RBP11.29□□□□□ -0.6
SIPA1L3-201ENST00000222345 IGKV1-9A0A0C4DH69 117 aa11.29□□□□□ -0.6
SIPA1L3-201ENST00000222345 EXOC3-AS1Q8N2X6 119 aa11.29□□□□□ -0.6
SIPA1L3-201ENST00000222345 PLXNB3Q9ULL4 1909 aa11.29□□□□□ -0.6
SIPA1L3-201ENST00000222345 CFPP27918 469 aa11.29□□□□□ -0.6
SIPA1L3-201ENST00000222345 PDLIM4P50479 330 aa11.29□□□□□ -0.6
SIPA1L3-201ENST00000222345 SUMO4Q6EEV6 95 aa11.29□□□□□ -0.6
SIPA1L3-201ENST00000222345 IGHV3OR16-10A0A075B7F0 116 aa11.28□□□□□ -0.6
SIPA1L3-201ENST00000222345 TRAV13-2A0A0B4J235 113 aa11.28□□□□□ -0.6
SIPA1L3-201ENST00000222345 PRSS46E5RG02 174 aa11.28□□□□□ -0.6
SIPA1L3-201ENST00000222345 IGKV2-40A0A087WW87 121 aaPredicted RBP11.28□□□□□ -0.6
SIPA1L3-201ENST00000222345 IGKV2D-40P01614 121 aaPredicted RBP11.28□□□□□ -0.6
SIPA1L3-201ENST00000222345 PF4P02776 101 aa11.28□□□□□ -0.6
SIPA1L3-201ENST00000222345 PPP1R32Q7Z5V6 425 aa11.28□□□□□ -0.6
SIPA1L3-201ENST00000222345 TIAF1O95411 115 aa11.28□□□□□ -0.6
SIPA1L3-201ENST00000222345 TRGV4A0A0C4DH28 118 aa11.28□□□□□ -0.6
SIPA1L3-201ENST00000222345 SYNJ2BPP57105 145 aa11.28□□□□□ -0.6
SIPA1L3-201ENST00000222345 ANAPC10Q9UM13 185 aa11.28□□□□□ -0.6
SIPA1L3-201ENST00000222345 DEFB125Q8N687 156 aa11.28□□□□□ -0.6
SIPA1L3-201ENST00000222345 LIME1Q9H400 295 aa11.28□□□□□ -0.6
SIPA1L3-201ENST00000222345 IGLC7A0M8Q6 106 aa11.27□□□□□ -0.6
SIPA1L3-201ENST00000222345 CMC4P56277 68 aaPredicted RBP11.27□□□□□ -0.6
SIPA1L3-201ENST00000222345 ZNF876PQ49A33 203 aa11.27□□□□□ -0.6
SIPA1L3-201ENST00000222345 SPSB3Q6PJ21 355 aa11.27□□□□□ -0.6
SIPA1L3-201ENST00000222345 SPTA1P02549 2419 aa11.27□□□□□ -0.6
SIPA1L3-201ENST00000222345 RPL36AP83881 106 aaKnown RBP11.27□□□□□ -0.6
SIPA1L3-201ENST00000222345 Q8N8P6 123 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms