RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 SHANK2-AS3Q9BTD1 123 aa12.37□□□□□ -0.43
LIM2-201ENST00000221973 TECRQ9NZ01 308 aaKnown RBP12.37□□□□□ -0.43
LIM2-201ENST00000221973 IGLV1-51P01701 117 aa12.36□□□□□ -0.43
LIM2-201ENST00000221973 SPP1P10451 314 aa12.36□□□□□ -0.43
LIM2-201ENST00000221973 M6PRP20645 277 aa12.36□□□□□ -0.43
LIM2-201ENST00000221973 RAB2AP61019 212 aa12.36□□□□□ -0.43
LIM2-201ENST00000221973 SERF2P84101 59 aa12.36□□□□□ -0.43
LIM2-201ENST00000221973 FAM78BQ5VT40 261 aa12.36□□□□□ -0.43
LIM2-201ENST00000221973 MORN5Q5VZ52 161 aa12.36□□□□□ -0.43
LIM2-201ENST00000221973 TCF24Q7RTU0 167 aa12.36□□□□□ -0.43
LIM2-201ENST00000221973 GPR61Q9BZJ8 451 aa12.36□□□□□ -0.43
LIM2-201ENST00000221973 IGKV3-7A0A075B6H7 116 aa12.35□□□□□ -0.43
LIM2-201ENST00000221973 TRAV5A0A0B4J249 113 aa12.35□□□□□ -0.43
LIM2-201ENST00000221973 RPL11P62913 178 aaKnown RBP12.35□□□□□ -0.43
LIM2-201ENST00000221973 C1orf194Q5T5A4 169 aa12.35□□□□□ -0.43
LIM2-201ENST00000221973 SPATA31B1PQ5VZV4 182 aa12.35□□□□□ -0.43
LIM2-201ENST00000221973 OR8I2Q8N0Y5 310 aa12.35□□□□□ -0.43
LIM2-201ENST00000221973 OR10G4Q8NGN3 311 aa12.35□□□□□ -0.43
LIM2-201ENST00000221973 OR10G9Q8NGN4 311 aa12.35□□□□□ -0.43
LIM2-201ENST00000221973 OR10G7Q8NGN6 311 aa12.35□□□□□ -0.43
LIM2-201ENST00000221973 GLMPQ8WWB7 406 aa12.35□□□□□ -0.43
LIM2-201ENST00000221973 B9D2Q9BPU9 175 aa12.35□□□□□ -0.43
LIM2-201ENST00000221973 SEPSECSQ9HD40 501 aaKnown RBP12.35□□□□□ -0.43
LIM2-201ENST00000221973 IZUMO1RA6ND01 250 aa12.34□□□□□ -0.43
LIM2-201ENST00000221973 SEC11BP0C7V7 166 aa12.34□□□□□ -0.43
LIM2-201ENST00000221973 AKR1C8PQ5T2L2 129 aa12.34□□□□□ -0.43
LIM2-201ENST00000221973 FAM90A2PQ658T7 463 aa12.34□□□□□ -0.43
LIM2-201ENST00000221973 FAM122CQ6P4D5 195 aa12.34□□□□□ -0.43
LIM2-201ENST00000221973 RBPMS2Q6ZRY4 209 aaKnown RBP12.34□□□□□ -0.43
LIM2-201ENST00000221973 MIR17HGQ75NE6 70 aa12.34□□□□□ -0.43
LIM2-201ENST00000221973 TMEM61Q8N0U2 210 aa12.34□□□□□ -0.43
LIM2-201ENST00000221973 TMED6Q8WW62 240 aa12.34□□□□□ -0.43
LIM2-201ENST00000221973 FUT9Q9Y231 359 aa12.34□□□□□ -0.43
LIM2-201ENST00000221973 A0A1W2PPV4 95 aa12.33□□□□□ -0.44
LIM2-201ENST00000221973 EIF3GO75821 320 aaKnown RBP eCLIP12.33□□□□□ -0.44
LIM2-201ENST00000221973 MBP02144 154 aa12.33□□□□□ -0.44
LIM2-201ENST00000221973 RHOBP62745 196 aa12.33□□□□□ -0.44
LIM2-201ENST00000221973 TMEM41BQ5BJD5 291 aa12.33□□□□□ -0.44
LIM2-201ENST00000221973 SIGLEC15Q6ZMC9 328 aa12.33□□□□□ -0.44
LIM2-201ENST00000221973 MRPL32Q9BYC8 188 aaKnown RBP12.33□□□□□ -0.44
LIM2-201ENST00000221973 RPRMQ9NS64 109 aa12.33□□□□□ -0.44
LIM2-201ENST00000221973 PLA2G2EQ9NZK7 142 aa12.33□□□□□ -0.44
LIM2-201ENST00000221973 HELTA6NFD8 242 aa12.32□□□□□ -0.44
LIM2-201ENST00000221973 GUCA2BQ16661 112 aa12.32□□□□□ -0.44
LIM2-201ENST00000221973 LCN12Q6JVE5 192 aa12.32□□□□□ -0.44
LIM2-201ENST00000221973 GBGT1Q8N5D6 347 aa12.32□□□□□ -0.44
LIM2-201ENST00000221973 OR2K2Q8NGT1 345 aa12.32□□□□□ -0.44
LIM2-201ENST00000221973 RNF24Q9Y225 148 aa12.32□□□□□ -0.44
LIM2-201ENST00000221973 TRAV25A0A0B4J276 109 aa12.31□□□□□ -0.44
LIM2-201ENST00000221973 CD5P06127 495 aa12.31□□□□□ -0.44
LIM2-201ENST00000221973 RPL7P18124 248 aaKnown RBP12.31□□□□□ -0.44
LIM2-201ENST00000221973 GALR1P47211 349 aa12.31□□□□□ -0.44
LIM2-201ENST00000221973 TFPI2P48307 235 aa12.31□□□□□ -0.44
LIM2-201ENST00000221973 EIF5AL1Q6IS14 154 aaKnown RBP12.31□□□□□ -0.44
LIM2-201ENST00000221973 WFDC3Q8IUB2 231 aa12.31□□□□□ -0.44
LIM2-201ENST00000221973 RPP25LQ8N5L8 163 aaKnown RBP12.31□□□□□ -0.44
LIM2-201ENST00000221973 STXBP6Q8NFX7 210 aa12.31□□□□□ -0.44
LIM2-201ENST00000221973 GPR82Q96P67 336 aa12.31□□□□□ -0.44
LIM2-201ENST00000221973 SMAD5-AS1Q9Y6J3 95 aa12.31□□□□□ -0.44
LIM2-201ENST00000221973 STAB2Q8WWQ8 2551 aa12.3□□□□□ -0.44
LIM2-201ENST00000221973 ZNF785A8K8V0 405 aa12.3□□□□□ -0.44
LIM2-201ENST00000221973 TSPAN4O14817 238 aa12.3□□□□□ -0.44
LIM2-201ENST00000221973 HMGB3O15347 200 aaKnown RBP12.3□□□□□ -0.44
LIM2-201ENST00000221973 CDC34P49427 236 aaPredicted RBP12.3□□□□□ -0.44
LIM2-201ENST00000221973 BPIFA4PQ86YQ2 179 aa12.3□□□□□ -0.44
LIM2-201ENST00000221973 FAM167A-AS1Q96KT0 104 aa12.3□□□□□ -0.44
LIM2-201ENST00000221973 SLC25A2Q9BXI2 301 aa12.3□□□□□ -0.44
LIM2-201ENST00000221973 ACTR3CQ9C0K3 210 aaPredicted RBP12.3□□□□□ -0.44
LIM2-201ENST00000221973 MS4A6AQ9H2W1 248 aa12.3□□□□□ -0.44
LIM2-201ENST00000221973 HUWE1Q7Z6Z7 4374 aaKnown RBP12.3□□□□□ -0.44
LIM2-201ENST00000221973 UMAD1C9J7I0 102 aa12.29□□□□□ -0.44
LIM2-201ENST00000221973 DNASE2O00115 360 aaPredicted RBP12.29□□□□□ -0.44
LIM2-201ENST00000221973 SNRPCP09234 159 aaKnown RBP12.29□□□□□ -0.44
LIM2-201ENST00000221973 TAS2R45P59539 299 aa12.29□□□□□ -0.44
LIM2-201ENST00000221973 PAFAH1B2P68402 229 aa12.29□□□□□ -0.44
LIM2-201ENST00000221973 RAB24Q969Q5 203 aa12.29□□□□□ -0.44
LIM2-201ENST00000221973 SPAG8Q99932 426 aaPredicted RBP12.29□□□□□ -0.44
LIM2-201ENST00000221973 MRPS12O15235 138 aaKnown RBP12.28□□□□□ -0.44
LIM2-201ENST00000221973 OR7C2O60412 319 aa12.28□□□□□ -0.44
LIM2-201ENST00000221973 PYYP10082 97 aa12.28□□□□□ -0.44
LIM2-201ENST00000221973 ATF4P18848 351 aaPredicted RBP12.28□□□□□ -0.44
LIM2-201ENST00000221973 FHITP49789 147 aa12.28□□□□□ -0.44
LIM2-201ENST00000221973 ZNF726P1Q15940 193 aa12.28□□□□□ -0.44
LIM2-201ENST00000221973 KHDC3LQ587J8 217 aa12.28□□□□□ -0.44
LIM2-201ENST00000221973 SSX7Q7RTT5 188 aa12.28□□□□□ -0.44
LIM2-201ENST00000221973 FAM213BQ8TBF2 198 aa12.28□□□□□ -0.44
LIM2-201ENST00000221973 WWC2-AS2Q96NR7 200 aa12.28□□□□□ -0.44
LIM2-201ENST00000221973 NRN1Q9NPD7 142 aa12.28□□□□□ -0.44
LIM2-201ENST00000221973 H3BTX0 84 aa12.27□□□□□ -0.45
LIM2-201ENST00000221973 GP9P14770 177 aa12.27□□□□□ -0.45
LIM2-201ENST00000221973 FAM74A1Q5RGS3 127 aa12.27□□□□□ -0.45
LIM2-201ENST00000221973 ALKAL2Q6UX46 152 aa12.27□□□□□ -0.45
LIM2-201ENST00000221973 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.27□□□□□ -0.45
LIM2-201ENST00000221973 PAXXQ9BUH6 204 aa12.27□□□□□ -0.45
LIM2-201ENST00000221973 OR51M1Q9H341 326 aa12.27□□□□□ -0.45
LIM2-201ENST00000221973 TMEM14CQ9P0S9 112 aa12.27□□□□□ -0.45
LIM2-201ENST00000221973 ZNF256Q9Y2P7 627 aaPredicted RBP12.27□□□□□ -0.45
LIM2-201ENST00000221973 CTXND1A0A1B0GTU2 59 aa12.26□□□□□ -0.45
LIM2-201ENST00000221973 OR4C46A6NHA9 309 aa12.26□□□□□ -0.45
LIM2-201ENST00000221973 H3BQ15 152 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms