RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 MOSP00540 346 aa12.76□□□□□ -0.37
SF3A2-201ENST00000221494 CD40P25942 277 aa12.76□□□□□ -0.37
SF3A2-201ENST00000221494 OCIAD2Q56VL3 154 aa12.76□□□□□ -0.37
SF3A2-201ENST00000221494 Q6ZVH6 145 aa12.76□□□□□ -0.37
SF3A2-201ENST00000221494 LINC00311Q8N616 119 aa12.76□□□□□ -0.37
SF3A2-201ENST00000221494 GTSF1Q8WW33 167 aa12.76□□□□□ -0.37
SF3A2-201ENST00000221494 PEF1Q9UBV8 284 aaKnown RBP12.76□□□□□ -0.37
SF3A2-201ENST00000221494 HEATR1Q9H583 2144 aaKnown RBP12.76□□□□□ -0.37
SF3A2-201ENST00000221494 ADGRG4Q8IZF6 3080 aa12.76□□□□□ -0.37
SF3A2-201ENST00000221494 PGPA6NDG6 321 aa12.76□□□□□ -0.37
SF3A2-201ENST00000221494 CHEK1O14757 476 aa12.76□□□□□ -0.37
SF3A2-201ENST00000221494 TCF24Q7RTU0 167 aa12.76□□□□□ -0.37
SF3A2-201ENST00000221494 S100A7AQ86SG5 101 aa12.76□□□□□ -0.37
SF3A2-201ENST00000221494 MRPL20Q9BYC9 149 aaKnown RBP12.76□□□□□ -0.37
SF3A2-201ENST00000221494 TNCP24821 2201 aa12.75□□□□□ -0.37
SF3A2-201ENST00000221494 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.75□□□□□ -0.37
SF3A2-201ENST00000221494 TCRAP04437 139 aa12.75□□□□□ -0.37
SF3A2-201ENST00000221494 WT1-ASQ06250 92 aa12.75□□□□□ -0.37
SF3A2-201ENST00000221494 OTORQ9NRC9 128 aa12.75□□□□□ -0.37
SF3A2-201ENST00000221494 K7ERU9 68 aa12.74□□□□□ -0.37
SF3A2-201ENST00000221494 COX8AP10176 69 aa12.74□□□□□ -0.37
SF3A2-201ENST00000221494 GNG5P63218 68 aa12.74□□□□□ -0.37
SF3A2-201ENST00000221494 TMEM186Q96B77 213 aa12.74□□□□□ -0.37
SF3A2-201ENST00000221494 TMEM14CQ9P0S9 112 aa12.74□□□□□ -0.37
SF3A2-201ENST00000221494 CGB1A6NKQ9 187 aa12.74□□□□□ -0.37
SF3A2-201ENST00000221494 SPRY3O43610 288 aa12.74□□□□□ -0.37
SF3A2-201ENST00000221494 GP9P14770 177 aa12.74□□□□□ -0.37
SF3A2-201ENST00000221494 ADORA2A-AS1P86434 159 aa12.74□□□□□ -0.37
SF3A2-201ENST00000221494 TNFAIP6P98066 277 aaPredicted RBP12.74□□□□□ -0.37
SF3A2-201ENST00000221494 VMA21Q3ZAQ7 101 aa12.74□□□□□ -0.37
SF3A2-201ENST00000221494 Q6AWC8 147 aa12.74□□□□□ -0.37
SF3A2-201ENST00000221494 WFDC8Q8IUA0 241 aa12.74□□□□□ -0.37
SF3A2-201ENST00000221494 PCNX1Q96RV3 2341 aa12.73□□□□□ -0.37
SF3A2-201ENST00000221494 SMG1Q96Q15 3661 aaKnown RBP12.73□□□□□ -0.37
SF3A2-201ENST00000221494 hDV102S1A0JD36 115 aa12.73□□□□□ -0.37
SF3A2-201ENST00000221494 APOHP02749 345 aaPredicted RBP12.73□□□□□ -0.37
SF3A2-201ENST00000221494 HOXB4P17483 251 aaPredicted RBP12.73□□□□□ -0.37
SF3A2-201ENST00000221494 GPR183P32249 361 aa12.73□□□□□ -0.37
SF3A2-201ENST00000221494 ZNF137PP52743 207 aa12.73□□□□□ -0.37
SF3A2-201ENST00000221494 SSBP2P81877 361 aaPredicted RBP12.73□□□□□ -0.37
SF3A2-201ENST00000221494 FBXL19-AS1Q494R0 122 aa12.73□□□□□ -0.37
SF3A2-201ENST00000221494 SPRNQ5BIV9 151 aa12.73□□□□□ -0.37
SF3A2-201ENST00000221494 PGLYRP4Q96LB8 373 aa12.73□□□□□ -0.37
SF3A2-201ENST00000221494 VPS25Q9BRG1 176 aa12.73□□□□□ -0.37
SF3A2-201ENST00000221494 NBASA2RRP1 2371 aa12.73□□□□□ -0.37
SF3A2-201ENST00000221494 MUC21A0A0G2JKD1 596 aa12.72□□□□□ -0.37
SF3A2-201ENST00000221494 MUC21A0A140T8X8 626 aa12.72□□□□□ -0.37
SF3A2-201ENST00000221494 CSN1S1P47710 185 aa12.72□□□□□ -0.37
SF3A2-201ENST00000221494 MUC21Q5SSG8 566 aa12.72□□□□□ -0.37
SF3A2-201ENST00000221494 SHISA2Q6UWI4 295 aa12.72□□□□□ -0.37
SF3A2-201ENST00000221494 Q86TA4 180 aa12.72□□□□□ -0.37
SF3A2-201ENST00000221494 TMEM116Q8NCL8 245 aa12.72□□□□□ -0.37
SF3A2-201ENST00000221494 SMPXQ9UHP9 88 aa12.72□□□□□ -0.37
SF3A2-201ENST00000221494 S100A7P31151 101 aa12.72□□□□□ -0.37
SF3A2-201ENST00000221494 RIGQ13278 110 aa12.72□□□□□ -0.37
SF3A2-201ENST00000221494 RNF151Q2KHN1 245 aa12.72□□□□□ -0.37
SF3A2-201ENST00000221494 OR1N2Q8NGR9 330 aa12.72□□□□□ -0.37
SF3A2-201ENST00000221494 C8orf46Q8TAG6 207 aa12.72□□□□□ -0.37
SF3A2-201ENST00000221494 SH2D7A6NKC9 451 aaPredicted RBP12.71□□□□□ -0.37
SF3A2-201ENST00000221494 IGLV2-23P01705 113 aa12.71□□□□□ -0.37
SF3A2-201ENST00000221494 LGALS7P47929 136 aa12.71□□□□□ -0.37
SF3A2-201ENST00000221494 CDSNQ15517 529 aa12.71□□□□□ -0.37
SF3A2-201ENST00000221494 LDLRAD2Q5SZI1 272 aa12.71□□□□□ -0.37
SF3A2-201ENST00000221494 LINC00322Q6ZN03 302 aaPredicted RBP12.71□□□□□ -0.37
SF3A2-201ENST00000221494 CCL13Q99616 98 aa12.71□□□□□ -0.37
SF3A2-201ENST00000221494 Q9H3A6 140 aa12.71□□□□□ -0.37
SF3A2-201ENST00000221494 CADP27708 2225 aa12.71□□□□□ -0.37
SF3A2-201ENST00000221494 FAM90A27PA6NNH2 459 aa12.7□□□□□ -0.38
SF3A2-201ENST00000221494 IGHV1-46P01743 117 aa12.7□□□□□ -0.38
SF3A2-201ENST00000221494 LINC00173Q6ZV60 143 aa12.7□□□□□ -0.38
SF3A2-201ENST00000221494 BPIFA4PQ86YQ2 179 aa12.7□□□□□ -0.38
SF3A2-201ENST00000221494 NUP37Q8NFH4 326 aa12.7□□□□□ -0.38
SF3A2-201ENST00000221494 ST6GALNAC6Q969X2 333 aa12.7□□□□□ -0.38
SF3A2-201ENST00000221494 A0A1B0GUT8 65 aa12.7□□□□□ -0.38
SF3A2-201ENST00000221494 OR2T8A6NH00 312 aa12.7□□□□□ -0.38
SF3A2-201ENST00000221494 PSG1P11464 419 aa12.7□□□□□ -0.38
SF3A2-201ENST00000221494 COL8A1P27658 744 aa12.7□□□□□ -0.38
SF3A2-201ENST00000221494 PSG9Q00887 426 aa12.7□□□□□ -0.38
SF3A2-201ENST00000221494 BSPH1Q075Z2 132 aa12.7□□□□□ -0.38
SF3A2-201ENST00000221494 PSMG4Q5JS54 123 aa12.7□□□□□ -0.38
SF3A2-201ENST00000221494 DUX4L9Q6RFH8 374 aaPredicted RBP12.7□□□□□ -0.38
SF3A2-201ENST00000221494 FAM216BQ8N7L0 139 aa12.7□□□□□ -0.38
SF3A2-201ENST00000221494 OR1B1Q8NGR6 318 aa12.7□□□□□ -0.38
SF3A2-201ENST00000221494 OR10AG1Q8NH19 301 aa12.7□□□□□ -0.38
SF3A2-201ENST00000221494 BLNKQ8WV28 456 aa12.7□□□□□ -0.38
SF3A2-201ENST00000221494 NEU4Q8WWR8 484 aaPredicted RBP12.7□□□□□ -0.38
SF3A2-201ENST00000221494 RNASE6Q93091 150 aaKnown RBP12.7□□□□□ -0.38
SF3A2-201ENST00000221494 AP5S1Q9NUS5 200 aa12.7□□□□□ -0.38
SF3A2-201ENST00000221494 E7EUB6 86 aa12.69□□□□□ -0.38
SF3A2-201ENST00000221494 HTR1DP28221 377 aa12.69□□□□□ -0.38
SF3A2-201ENST00000221494 CEACAM3P40198 252 aa12.69□□□□□ -0.38
SF3A2-201ENST00000221494 FAM201AQ5SY85 155 aa12.69□□□□□ -0.38
SF3A2-201ENST00000221494 AMMECR1LQ6DCA0 310 aa12.69□□□□□ -0.38
SF3A2-201ENST00000221494 TEX45Q8NA69 505 aa12.69□□□□□ -0.38
SF3A2-201ENST00000221494 ZNF747Q9BV97 191 aa12.69□□□□□ -0.38
SF3A2-201ENST00000221494 COL6A6A6NMZ7 2263 aa12.69□□□□□ -0.38
SF3A2-201ENST00000221494 SIVA1O15304 175 aa12.69□□□□□ -0.38
SF3A2-201ENST00000221494 IGLC1P0CG04 106 aa12.69□□□□□ -0.38
SF3A2-201ENST00000221494 ORM2P19652 201 aa12.69□□□□□ -0.38
SF3A2-201ENST00000221494 C5orf64Q2M2E5 130 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms