RNA–Protein interactions for RNA: ENST00000187762.6

TMEM38A-201, Transcript of transmembrane protein 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38A, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-201ENST00000187762 HIGD1BQ9P298 99 aa11.9□□□□□ -0.5
TMEM38A-201ENST00000187762 IGHV3OR15-7A0A075B7D8 119 aa11.9□□□□□ -0.51
TMEM38A-201ENST00000187762 IGHV1-18A0A0C4DH31 117 aa11.9□□□□□ -0.51
TMEM38A-201ENST00000187762 NPIPB6E9PJ23 425 aa11.9□□□□□ -0.51
TMEM38A-201ENST00000187762 C15orf65H3BRN8 121 aa11.9□□□□□ -0.51
TMEM38A-201ENST00000187762 MSMPQ1L6U9 139 aa11.9□□□□□ -0.51
TMEM38A-201ENST00000187762 RPL39P5Q59GN2 51 aa11.9□□□□□ -0.51
TMEM38A-201ENST00000187762 AMTNQ6UX39 209 aa11.9□□□□□ -0.51
TMEM38A-201ENST00000187762 CHAC1Q9BUX1 264 aa11.9□□□□□ -0.51
TMEM38A-201ENST00000187762 EPDR1Q9UM22 224 aa11.9□□□□□ -0.51
TMEM38A-201ENST00000187762 FOXA2Q9Y261 457 aaPredicted RBP11.9□□□□□ -0.51
TMEM38A-201ENST00000187762 LTAP01374 205 aa11.89□□□□□ -0.51
TMEM38A-201ENST00000187762 SPRNQ5BIV9 151 aa11.89□□□□□ -0.51
TMEM38A-201ENST00000187762 DDB2Q92466 427 aa11.89□□□□□ -0.51
TMEM38A-201ENST00000187762 DAZAP1Q96EP5 407 aaKnown RBP11.89□□□□□ -0.51
TMEM38A-201ENST00000187762 ZNF414Q96IQ9 312 aa11.89□□□□□ -0.51
TMEM38A-201ENST00000187762 S1PR3Q99500 378 aa11.89□□□□□ -0.51
TMEM38A-201ENST00000187762 TMEM14BQ9NUH8 114 aa11.89□□□□□ -0.51
TMEM38A-201ENST00000187762 KLF12Q9Y4X4 402 aa11.89□□□□□ -0.51
TMEM38A-201ENST00000187762 SLC25A5P05141 298 aaKnown RBP11.89□□□□□ -0.51
TMEM38A-201ENST00000187762 CRYGCP07315 174 aa11.89□□□□□ -0.51
TMEM38A-201ENST00000187762 MYCNOSP40205 109 aa11.89□□□□□ -0.51
TMEM38A-201ENST00000187762 IFI27P40305 119 aaPredicted RBP11.89□□□□□ -0.51
TMEM38A-201ENST00000187762 KLRD1Q13241 179 aa11.89□□□□□ -0.51
TMEM38A-201ENST00000187762 MLANAQ16655 118 aa11.89□□□□□ -0.51
TMEM38A-201ENST00000187762 PRDX2P32119 198 aa11.88□□□□□ -0.51
TMEM38A-201ENST00000187762 UTF1Q5T230 341 aa11.88□□□□□ -0.51
TMEM38A-201ENST00000187762 ICE1Q9Y2F5 2266 aa11.88□□□□□ -0.51
TMEM38A-201ENST00000187762 K7EMI3 77 aa11.88□□□□□ -0.51
TMEM38A-201ENST00000187762 APOMO95445 188 aa11.88□□□□□ -0.51
TMEM38A-201ENST00000187762 GAGE5Q13069 117 aa11.88□□□□□ -0.51
TMEM38A-201ENST00000187762 GAGE6Q13070 117 aa11.88□□□□□ -0.51
TMEM38A-201ENST00000187762 OR5AN1Q8NGI8 311 aa11.88□□□□□ -0.51
TMEM38A-201ENST00000187762 FXYD5Q96DB9 178 aa11.88□□□□□ -0.51
TMEM38A-201ENST00000187762 GNG12Q9UBI6 72 aa11.88□□□□□ -0.51
TMEM38A-201ENST00000187762 IGKV1D-17A0A075B6S4 117 aa11.87□□□□□ -0.51
TMEM38A-201ENST00000187762 A0A1B0GWB2 263 aa11.87□□□□□ -0.51
TMEM38A-201ENST00000187762 hADV38S2A0JD32 116 aa11.87□□□□□ -0.51
TMEM38A-201ENST00000187762 C16orf97H3BN30 126 aa11.87□□□□□ -0.51
TMEM38A-201ENST00000187762 SPINT2O43291 252 aa11.87□□□□□ -0.51
TMEM38A-201ENST00000187762 CT45A10P0DMU9 189 aa11.87□□□□□ -0.51
TMEM38A-201ENST00000187762 HERV-K104P63124 156 aa11.87□□□□□ -0.51
TMEM38A-201ENST00000187762 DMXL1Q9Y485 3027 aa11.87□□□□□ -0.51
TMEM38A-201ENST00000187762 TRBV7-9A0A0J9YWB2 115 aa11.87□□□□□ -0.51
TMEM38A-201ENST00000187762 FOXI1Q12951 378 aa11.87□□□□□ -0.51
TMEM38A-201ENST00000187762 Q6ZUT4 128 aa11.87□□□□□ -0.51
TMEM38A-201ENST00000187762 TM2D2Q9BX73 214 aa11.87□□□□□ -0.51
TMEM38A-201ENST00000187762 TTTY13Q9BZ97 58 aa11.87□□□□□ -0.51
TMEM38A-201ENST00000187762 OVOL3O00110 214 aa11.86□□□□□ -0.51
TMEM38A-201ENST00000187762 TNFRSF13BO14836 293 aaPredicted RBP11.86□□□□□ -0.51
TMEM38A-201ENST00000187762 COX7A2P2O60397 106 aa11.86□□□□□ -0.51
TMEM38A-201ENST00000187762 IGLV1-44P01699 117 aa11.86□□□□□ -0.51
TMEM38A-201ENST00000187762 XGP55808 180 aa11.86□□□□□ -0.51
TMEM38A-201ENST00000187762 CEND1Q8N111 149 aa11.86□□□□□ -0.51
TMEM38A-201ENST00000187762 ZNRF1Q8ND25 227 aa11.86□□□□□ -0.51
TMEM38A-201ENST00000187762 FAM110AQ9BQ89 295 aa11.86□□□□□ -0.51
TMEM38A-201ENST00000187762 ANAPC13Q9BS18 74 aa11.86□□□□□ -0.51
TMEM38A-201ENST00000187762 EP300Q09472 2414 aaPredicted RBP11.86□□□□□ -0.51
TMEM38A-201ENST00000187762 IGKV2D-26A0A0A0MRZ7 120 aa11.86□□□□□ -0.51
TMEM38A-201ENST00000187762 ZNF134P52741 427 aa11.86□□□□□ -0.51
TMEM38A-201ENST00000187762 C1orf162Q8NEQ5 155 aaPredicted RBP11.86□□□□□ -0.51
TMEM38A-201ENST00000187762 OSR1Q8TAX0 266 aaPredicted RBP11.86□□□□□ -0.51
TMEM38A-201ENST00000187762 LEAP2Q969E1 77 aa11.86□□□□□ -0.51
TMEM38A-201ENST00000187762 ZNF714Q96N38 554 aa11.86□□□□□ -0.51
TMEM38A-201ENST00000187762 DKK2Q9UBU2 259 aa11.86□□□□□ -0.51
TMEM38A-201ENST00000187762 DSCAMO60469 2012 aa11.85□□□□□ -0.51
TMEM38A-201ENST00000187762 SMG1Q96Q15 3661 aaKnown RBP11.85□□□□□ -0.51
TMEM38A-201ENST00000187762 LOC389332A0A1B0GUA5 103 aa11.85□□□□□ -0.51
TMEM38A-201ENST00000187762 PGPA6NDG6 321 aa11.85□□□□□ -0.51
TMEM38A-201ENST00000187762 FXYD7P58549 80 aa11.85□□□□□ -0.51
TMEM38A-201ENST00000187762 MBNL2Q5VZF2 373 aaKnown RBP11.85□□□□□ -0.51
TMEM38A-201ENST00000187762 C10orf113Q5VZT2 155 aa11.85□□□□□ -0.51
TMEM38A-201ENST00000187762 ZNF71Q9NQZ8 489 aaPredicted RBP11.85□□□□□ -0.51
TMEM38A-201ENST00000187762 DKK4Q9UBT3 224 aa11.85□□□□□ -0.51
TMEM38A-201ENST00000187762 CACNA1HO95180 2353 aa11.85□□□□□ -0.51
TMEM38A-201ENST00000187762 A0A1B0GUT8 65 aa11.85□□□□□ -0.51
TMEM38A-201ENST00000187762 PPIFP30405 207 aaKnown RBP11.85□□□□□ -0.51
TMEM38A-201ENST00000187762 KIR2DS2P43631 304 aa11.85□□□□□ -0.51
TMEM38A-201ENST00000187762 FHL3Q13643 280 aa11.85□□□□□ -0.51
TMEM38A-201ENST00000187762 FAM201AQ5SY85 155 aa11.85□□□□□ -0.51
TMEM38A-201ENST00000187762 C1orf229Q6ZS94 237 aaPredicted RBP11.85□□□□□ -0.51
TMEM38A-201ENST00000187762 PDPNQ86YL7 162 aa11.85□□□□□ -0.51
TMEM38A-201ENST00000187762 DEFB124Q8NES8 71 aa11.85□□□□□ -0.51
TMEM38A-201ENST00000187762 IFI27L1Q96BM0 104 aa11.85□□□□□ -0.51
TMEM38A-201ENST00000187762 B5MCH6 92 aa11.84□□□□□ -0.51
TMEM38A-201ENST00000187762 ARMS2P0C7Q2 107 aa11.84□□□□□ -0.51
TMEM38A-201ENST00000187762 FMC1Q96HJ9 113 aa11.84□□□□□ -0.51
TMEM38A-201ENST00000187762 C1QTNF4Q9BXJ3 329 aa11.84□□□□□ -0.51
TMEM38A-201ENST00000187762 PROCRQ9UNN8 238 aa11.84□□□□□ -0.51
TMEM38A-201ENST00000187762 COL8A1P27658 744 aa11.84□□□□□ -0.51
TMEM38A-201ENST00000187762 PATE2Q6UY27 113 aa11.84□□□□□ -0.51
TMEM38A-201ENST00000187762 PIFOQ8TCI5 191 aa11.84□□□□□ -0.51
TMEM38A-201ENST00000187762 IFI27L2Q9H2X8 130 aa11.84□□□□□ -0.51
TMEM38A-201ENST00000187762 TANC2Q9HCD6 1990 aa11.83□□□□□ -0.52
TMEM38A-201ENST00000187762 TRBV25-1A0A075B6N4 114 aa11.83□□□□□ -0.52
TMEM38A-201ENST00000187762 TRAV17A0A0B4J275 112 aa11.83□□□□□ -0.52
TMEM38A-201ENST00000187762 SRRM5B3KS81 715 aa11.83□□□□□ -0.52
TMEM38A-201ENST00000187762 HBDP02042 147 aa11.83□□□□□ -0.52
TMEM38A-201ENST00000187762 SLC25A48Q6ZT89 311 aaKnown RBP11.83□□□□□ -0.52
TMEM38A-201ENST00000187762 SEM1Q6ZVN7 128 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 146.6 ms