RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 HIGD1AQ9Y241 93 aa11.15□□□□□ -0.62
USH1C-201ENST00000005226 RIF1Q5UIP0 2472 aaKnown RBP11.15□□□□□ -0.62
USH1C-201ENST00000005226 CRXO43186 299 aaPredicted RBP11.15□□□□□ -0.62
USH1C-201ENST00000005226 NCR2O95944 276 aa11.15□□□□□ -0.62
USH1C-201ENST00000005226 FXYD7P58549 80 aa11.15□□□□□ -0.62
USH1C-201ENST00000005226 BVES-AS1Q5T3Y7 98 aa11.15□□□□□ -0.62
USH1C-201ENST00000005226 ETFRF1Q6IPR1 90 aa11.15□□□□□ -0.62
USH1C-201ENST00000005226 SLC25A34Q6PIV7 304 aa11.15□□□□□ -0.62
USH1C-201ENST00000005226 TMEM116Q8NCL8 245 aa11.15□□□□□ -0.62
USH1C-201ENST00000005226 C22orf15Q8WYQ4 148 aa11.15□□□□□ -0.62
USH1C-201ENST00000005226 CHCHD1Q96BP2 118 aaKnown RBP11.15□□□□□ -0.62
USH1C-201ENST00000005226 ZNF492Q9P255 531 aa11.15□□□□□ -0.62
USH1C-201ENST00000005226 DCHS2Q6V1P9 2916 aa11.15□□□□□ -0.63
USH1C-201ENST00000005226 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.15□□□□□ -0.63
USH1C-201ENST00000005226 IGHV2-70DA0A0C4DH43 119 aa11.15□□□□□ -0.63
USH1C-201ENST00000005226 OVOL3O00110 214 aa11.15□□□□□ -0.63
USH1C-201ENST00000005226 APOHP02749 345 aaPredicted RBP11.15□□□□□ -0.63
USH1C-201ENST00000005226 THBDP07204 575 aa11.15□□□□□ -0.63
USH1C-201ENST00000005226 SLC25A39Q9BZJ4 359 aaPredicted RBP11.15□□□□□ -0.63
USH1C-201ENST00000005226 ST20Q9HBF5 79 aa11.15□□□□□ -0.63
USH1C-201ENST00000005226 COX7A1P24310 79 aa11.14□□□□□ -0.63
USH1C-201ENST00000005226 C3orf36Q3SXR2 165 aa11.14□□□□□ -0.63
USH1C-201ENST00000005226 BCL6BQ8N143 479 aaPredicted RBP11.14□□□□□ -0.63
USH1C-201ENST00000005226 NUP37Q8NFH4 326 aa11.14□□□□□ -0.63
USH1C-201ENST00000005226 MAP1LC3CQ9BXW4 147 aa11.14□□□□□ -0.63
USH1C-201ENST00000005226 SIGLEC9Q9Y336 463 aa11.14□□□□□ -0.63
USH1C-201ENST00000005226 TMSB15BA0A087X1C1 80 aa11.14□□□□□ -0.63
USH1C-201ENST00000005226 A0A0G2JNJ9 132 aa11.14□□□□□ -0.63
USH1C-201ENST00000005226 CEACAM4O75871 244 aa11.14□□□□□ -0.63
USH1C-201ENST00000005226 MC5RP33032 325 aa11.14□□□□□ -0.63
USH1C-201ENST00000005226 TMEM191AQ9H0A3 160 aa11.14□□□□□ -0.63
USH1C-201ENST00000005226 Q9UFV3 132 aa11.14□□□□□ -0.63
USH1C-201ENST00000005226 LOC389332A0A1B0GUA5 103 aa11.13□□□□□ -0.63
USH1C-201ENST00000005226 C16orf97H3BN30 126 aa11.13□□□□□ -0.63
USH1C-201ENST00000005226 TNFRSF13BO14836 293 aaPredicted RBP11.13□□□□□ -0.63
USH1C-201ENST00000005226 LGALS7P47929 136 aa11.13□□□□□ -0.63
USH1C-201ENST00000005226 TMEM155Q4W5P6 130 aa11.13□□□□□ -0.63
USH1C-201ENST00000005226 AMMECR1LQ6DCA0 310 aa11.13□□□□□ -0.63
USH1C-201ENST00000005226 PIP4P1Q86T03 277 aa11.13□□□□□ -0.63
USH1C-201ENST00000005226 LINC00311Q8N616 119 aa11.13□□□□□ -0.63
USH1C-201ENST00000005226 NEU4Q8WWR8 484 aaPredicted RBP11.13□□□□□ -0.63
USH1C-201ENST00000005226 NDFIP1Q9BT67 221 aa11.13□□□□□ -0.63
USH1C-201ENST00000005226 TEX22C9J3V5 150 aa11.13□□□□□ -0.63
USH1C-201ENST00000005226 HSBP1L1C9JCN9 74 aa11.13□□□□□ -0.63
USH1C-201ENST00000005226 M0R3E3 92 aa11.13□□□□□ -0.63
USH1C-201ENST00000005226 IGLC1P0CG04 106 aa11.13□□□□□ -0.63
USH1C-201ENST00000005226 LOXL1Q08397 574 aaPredicted RBP11.13□□□□□ -0.63
USH1C-201ENST00000005226 CT83Q5H943 113 aa11.13□□□□□ -0.63
USH1C-201ENST00000005226 TMEM133Q9H2Q1 129 aa11.13□□□□□ -0.63
USH1C-201ENST00000005226 SCRT2Q9NQ03 307 aa11.13□□□□□ -0.63
USH1C-201ENST00000005226 INSIG2Q9Y5U4 225 aa11.13□□□□□ -0.63
USH1C-201ENST00000005226 ARHGAP32A7KAX9 2087 aa11.12□□□□□ -0.63
USH1C-201ENST00000005226 CUL9Q8IWT3 2517 aa11.12□□□□□ -0.63
USH1C-201ENST00000005226 LIPFP07098 398 aa11.12□□□□□ -0.63
USH1C-201ENST00000005226 KLF17Q5JT82 389 aaPredicted RBP11.12□□□□□ -0.63
USH1C-201ENST00000005226 OTORQ9NRC9 128 aa11.12□□□□□ -0.63
USH1C-201ENST00000005226 NPIPB6E9PJ23 425 aa11.12□□□□□ -0.63
USH1C-201ENST00000005226 HAX1O00165 279 aa11.12□□□□□ -0.63
USH1C-201ENST00000005226 OR5AL1P0C617 328 aa11.12□□□□□ -0.63
USH1C-201ENST00000005226 CRIP1P50238 77 aa11.12□□□□□ -0.63
USH1C-201ENST00000005226 Q6ZS92 163 aa11.12□□□□□ -0.63
USH1C-201ENST00000005226 PPP1R27Q86WC6 154 aa11.12□□□□□ -0.63
USH1C-201ENST00000005226 F11RQ9Y624 299 aaKnown RBP11.12□□□□□ -0.63
USH1C-201ENST00000005226 SERTM2A0A1B0GWG4 89 aa11.11□□□□□ -0.63
USH1C-201ENST00000005226 CRYGBP07316 175 aa11.11□□□□□ -0.63
USH1C-201ENST00000005226 ARF6P62330 175 aa11.11□□□□□ -0.63
USH1C-201ENST00000005226 FAM162BQ5T6X4 162 aa11.11□□□□□ -0.63
USH1C-201ENST00000005226 SMIM12Q96EX1 92 aa11.11□□□□□ -0.63
USH1C-201ENST00000005226 GFRA4Q9GZZ7 299 aa11.11□□□□□ -0.63
USH1C-201ENST00000005226 A0A1B0GUT8 65 aa11.11□□□□□ -0.63
USH1C-201ENST00000005226 K7EP13 123 aa11.11□□□□□ -0.63
USH1C-201ENST00000005226 IGKV1-17P01599 117 aa11.11□□□□□ -0.63
USH1C-201ENST00000005226 C8orf49Q96NF6 230 aa11.11□□□□□ -0.63
USH1C-201ENST00000005226 RASL11BQ9BPW5 248 aa11.11□□□□□ -0.63
USH1C-201ENST00000005226 DYNLRB1Q9NP97 96 aa11.11□□□□□ -0.63
USH1C-201ENST00000005226 SOX21Q9Y651 276 aaPredicted RBP11.11□□□□□ -0.63
USH1C-201ENST00000005226 BSNQ9UPA5 3926 aa11.1□□□□□ -0.63
USH1C-201ENST00000005226 IGHV1-3A0A0C4DH29 117 aa11.1□□□□□ -0.63
USH1C-201ENST00000005226 PLGLAQ15195 96 aa11.1□□□□□ -0.63
USH1C-201ENST00000005226 PRSS3P2Q8NHM4 247 aa11.1□□□□□ -0.63
USH1C-201ENST00000005226 FAM57AQ8TBR7 257 aa11.1□□□□□ -0.63
USH1C-201ENST00000005226 RNASE6Q93091 150 aaKnown RBP11.1□□□□□ -0.63
USH1C-201ENST00000005226 ZFHX2Q9C0A1 2572 aaPredicted RBP11.1□□□□□ -0.63
USH1C-201ENST00000005226 IFI27P40305 119 aaPredicted RBP11.1□□□□□ -0.63
USH1C-201ENST00000005226 PVRIGQ6DKI7 326 aa11.1□□□□□ -0.63
USH1C-201ENST00000005226 C1RLQ9NZP8 487 aa11.1□□□□□ -0.63
USH1C-201ENST00000005226 ABCA4P78363 2273 aa11.1□□□□□ -0.63
USH1C-201ENST00000005226 I3L2K1 104 aa11.09□□□□□ -0.63
USH1C-201ENST00000005226 UQCRFS1P47985 274 aa11.09□□□□□ -0.63
USH1C-201ENST00000005226 PLP1P60201 277 aa11.09□□□□□ -0.63
USH1C-201ENST00000005226 FAM71F2Q6NXP2 309 aa11.09□□□□□ -0.63
USH1C-201ENST00000005226 PET117Q6UWS5 81 aa11.09□□□□□ -0.63
USH1C-201ENST00000005226 OR8A1Q8NGG7 326 aa11.09□□□□□ -0.63
USH1C-201ENST00000005226 PSG8Q9UQ74 426 aa11.09□□□□□ -0.63
USH1C-201ENST00000005226 RELNP78509 3460 aa11.09□□□□□ -0.63
USH1C-201ENST00000005226 TRAV30A0A087WSZ9 112 aa11.09□□□□□ -0.63
USH1C-201ENST00000005226 TMEM213A2RRL7 107 aa11.09□□□□□ -0.63
USH1C-201ENST00000005226 HLA-DRB1P01911 266 aa11.09□□□□□ -0.63
USH1C-201ENST00000005226 LDLRAD2Q5SZI1 272 aa11.09□□□□□ -0.63
USH1C-201ENST00000005226 DEFB125Q8N687 156 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 202.7 ms