RNA–Protein interactions for RNA: ENST00000641899.1

SRRM4-204, Transcript of serine/arginine repetitive matrix 4, humanhuman

Gene SRRM4, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-204ENST00000641899 CCL5P13501 91 aa18.94■□□□□ 0.62
SRRM4-204ENST00000641899 OSBPP22059 807 aa18.94■□□□□ 0.62
SRRM4-204ENST00000641899 ZEB1P37275 1124 aaPredicted RBP18.94■□□□□ 0.62
SRRM4-204ENST00000641899 CACNB3P54284 484 aa18.94■□□□□ 0.62
SRRM4-204ENST00000641899 MTFR1Q15390 333 aa18.94■□□□□ 0.62
SRRM4-204ENST00000641899 SLC4A10Q6U841 1118 aa18.94■□□□□ 0.62
SRRM4-204ENST00000641899 HHIPL2Q6UWX4 724 aa18.94■□□□□ 0.62
SRRM4-204ENST00000641899 IFIT1P09914 478 aaKnown RBP18.93■□□□□ 0.62
SRRM4-204ENST00000641899 IQSEC3Q9UPP2 1182 aaPredicted RBP18.93■□□□□ 0.62
SRRM4-204ENST00000641899 ECM2O94769 699 aaPredicted RBP18.92■□□□□ 0.62
SRRM4-204ENST00000641899 EXOSC9Q06265 439 aaKnown RBP18.92■□□□□ 0.62
SRRM4-204ENST00000641899 MIGA2Q7L4E1 593 aa18.92■□□□□ 0.62
SRRM4-204ENST00000641899 SLC17A8Q8NDX2 589 aa18.92■□□□□ 0.62
SRRM4-204ENST00000641899 FAM151AQ8WW52 585 aa18.92■□□□□ 0.62
SRRM4-204ENST00000641899 SHISA4Q96DD7 197 aa18.92■□□□□ 0.62
SRRM4-204ENST00000641899 KCNH4Q9UQ05 1017 aa18.92■□□□□ 0.62
SRRM4-204ENST00000641899 OTOFQ9HC10 1997 aa18.92■□□□□ 0.62
SRRM4-204ENST00000641899 FARP2O94887 1054 aaPredicted RBP18.91■□□□□ 0.62
SRRM4-204ENST00000641899 PDE8BO95263 885 aa18.91■□□□□ 0.62
SRRM4-204ENST00000641899 APOBEC3HQ6NTF7 200 aaKnown RBP18.91■□□□□ 0.62
SRRM4-204ENST00000641899 FASTKD5Q7L8L6 764 aaKnown RBP18.91■□□□□ 0.62
SRRM4-204ENST00000641899 WDR66Q8TBY9 1149 aa18.91■□□□□ 0.62
SRRM4-204ENST00000641899 PUS3Q9BZE2 481 aaKnown RBP18.91■□□□□ 0.62
SRRM4-204ENST00000641899 KIF16BQ96L93 1317 aa18.91■□□□□ 0.62
SRRM4-204ENST00000641899 CXCL11O14625 94 aa18.9■□□□□ 0.62
SRRM4-204ENST00000641899 EVI5O60447 810 aa18.9■□□□□ 0.62
SRRM4-204ENST00000641899 U2AF1L4Q8WU68 220 aaKnown RBP18.9■□□□□ 0.62
SRRM4-204ENST00000641899 PUM3Q15397 648 aaKnown RBP18.89■□□□□ 0.61
SRRM4-204ENST00000641899 SUCLG2Q96I99 432 aa18.89■□□□□ 0.61
SRRM4-204ENST00000641899 PICK1Q9NRD5 415 aa18.89■□□□□ 0.61
SRRM4-204ENST00000641899 DLL1O00548 723 aa18.88■□□□□ 0.61
SRRM4-204ENST00000641899 INPP5BP32019 993 aa18.88■□□□□ 0.61
SRRM4-204ENST00000641899 PRKCZQ05513 592 aa18.88■□□□□ 0.61
SRRM4-204ENST00000641899 GRIK5Q16478 980 aa18.88■□□□□ 0.61
SRRM4-204ENST00000641899 NOL9Q5SY16 702 aaKnown RBP18.88■□□□□ 0.61
SRRM4-204ENST00000641899 UBE2Q1Q7Z7E8 422 aa18.88■□□□□ 0.61
SRRM4-204ENST00000641899 ZNF112Q9UJU3 913 aa18.88■□□□□ 0.61
SRRM4-204ENST00000641899 ARAP2Q8WZ64 1704 aa18.88■□□□□ 0.61
SRRM4-204ENST00000641899 ZBTB7BO15156 539 aaPredicted RBP18.87■□□□□ 0.61
SRRM4-204ENST00000641899 SGPL1O95470 568 aa18.87■□□□□ 0.61
SRRM4-204ENST00000641899 TFRCP02786 760 aaKnown RBP18.87■□□□□ 0.61
SRRM4-204ENST00000641899 SLC5A1P13866 664 aa18.87■□□□□ 0.61
SRRM4-204ENST00000641899 BCAMP50895 628 aa18.87■□□□□ 0.61
SRRM4-204ENST00000641899 ADGRA2Q96PE1 1338 aa18.86■□□□□ 0.61
SRRM4-204ENST00000641899 ADCY3O60266 1144 aa18.86■□□□□ 0.61
SRRM4-204ENST00000641899 TCP10Q12799 353 aa18.86■□□□□ 0.61
SRRM4-204ENST00000641899 RABL6Q3YEC7 729 aaPredicted RBP18.86■□□□□ 0.61
SRRM4-204ENST00000641899 PXYLP1Q8TE99 480 aa18.86■□□□□ 0.61
SRRM4-204ENST00000641899 BICC1Q9H694 974 aaKnown RBP18.86■□□□□ 0.61
SRRM4-204ENST00000641899 GNL3LQ9NVN8 582 aaKnown RBP18.86■□□□□ 0.61
SRRM4-204ENST00000641899 UTYO14607 1347 aa18.85■□□□□ 0.61
SRRM4-204ENST00000641899 TNPO2O14787 897 aaKnown RBP18.85■□□□□ 0.61
SRRM4-204ENST00000641899 BCRP11274 1271 aa18.85■□□□□ 0.61
SRRM4-204ENST00000641899 CTGFP29279 349 aa18.85■□□□□ 0.61
SRRM4-204ENST00000641899 LRRC24Q50LG9 513 aa18.85■□□□□ 0.61
SRRM4-204ENST00000641899 SMCR8Q8TEV9 937 aaPredicted RBP18.85■□□□□ 0.61
SRRM4-204ENST00000641899 LPIN2Q92539 896 aa18.85■□□□□ 0.61
SRRM4-204ENST00000641899 SLC45A1Q9Y2W3 748 aa18.85■□□□□ 0.61
SRRM4-204ENST00000641899 A0A1B0GUL6 1792 aa18.85■□□□□ 0.61
SRRM4-204ENST00000641899 TRIOBPQ9H2D6 2365 aa18.84■□□□□ 0.61
SRRM4-204ENST00000641899 NBPF7P0C2Y1 421 aaPredicted RBP18.84■□□□□ 0.61
SRRM4-204ENST00000641899 COA7Q96BR5 231 aa18.84■□□□□ 0.61
SRRM4-204ENST00000641899 UNC93B1Q9H1C4 597 aa18.84■□□□□ 0.61
SRRM4-204ENST00000641899 PRO3102Q9H379 93 aa18.84■□□□□ 0.61
SRRM4-204ENST00000641899 SALL2Q9Y467 1007 aaPredicted RBP18.84■□□□□ 0.61
SRRM4-204ENST00000641899 CACNA1FO60840 1977 aa18.84■□□□□ 0.61
SRRM4-204ENST00000641899 CYP2C8P10632 490 aa18.83■□□□□ 0.6
SRRM4-204ENST00000641899 IRF5Q13568 498 aa18.83■□□□□ 0.6
SRRM4-204ENST00000641899 CDC42EP5Q6NZY7 148 aa18.83■□□□□ 0.6
SRRM4-204ENST00000641899 SCYL3Q8IZE3 742 aa18.83■□□□□ 0.6
SRRM4-204ENST00000641899 VGLL2Q8N8G2 317 aa18.83■□□□□ 0.6
SRRM4-204ENST00000641899 KAZALD1Q96I82 304 aa18.83■□□□□ 0.6
SRRM4-204ENST00000641899 LRRFIP2Q9Y608 721 aaKnown RBP18.83■□□□□ 0.6
SRRM4-204ENST00000641899 ZHX2Q9Y6X8 837 aa18.83■□□□□ 0.6
SRRM4-204ENST00000641899 INHAP05111 366 aa18.82■□□□□ 0.6
SRRM4-204ENST00000641899 LDHBP07195 334 aaKnown RBP18.82■□□□□ 0.6
SRRM4-204ENST00000641899 FLT3LGP49771 235 aa18.82■□□□□ 0.6
SRRM4-204ENST00000641899 ZGPATQ8N5A5 531 aaKnown RBP18.82■□□□□ 0.6
SRRM4-204ENST00000641899 USP40Q9NVE5 1235 aa18.82■□□□□ 0.6
SRRM4-204ENST00000641899 PNMA3Q9UL41 463 aa18.82■□□□□ 0.6
SRRM4-204ENST00000641899 DAGLAQ9Y4D2 1042 aa18.82■□□□□ 0.6
SRRM4-204ENST00000641899 A0A0G2JLL6 359 aaPredicted RBP18.81■□□□□ 0.6
SRRM4-204ENST00000641899 MOGSQ13724 837 aa18.81■□□□□ 0.6
SRRM4-204ENST00000641899 GPAT2Q6NUI2 795 aa18.81■□□□□ 0.6
SRRM4-204ENST00000641899 GADL1Q6ZQY3 521 aa18.81■□□□□ 0.6
SRRM4-204ENST00000641899 NECAB2Q7Z6G3 386 aa18.81■□□□□ 0.6
SRRM4-204ENST00000641899 PRRT2Q7Z6L0 340 aaPredicted RBP18.81■□□□□ 0.6
SRRM4-204ENST00000641899 ZSCAN29Q8IWY8 852 aaPredicted RBP18.81■□□□□ 0.6
SRRM4-204ENST00000641899 SLF2Q8IX21 1173 aa18.81■□□□□ 0.6
SRRM4-204ENST00000641899 DEFB118Q96PH6 123 aa18.81■□□□□ 0.6
SRRM4-204ENST00000641899 CEP290O15078 2479 aa18.81■□□□□ 0.6
SRRM4-204ENST00000641899 FGFR2P21802 821 aa18.8■□□□□ 0.6
SRRM4-204ENST00000641899 GPR153Q6NV75 609 aa18.8■□□□□ 0.6
SRRM4-204ENST00000641899 MRS2Q9HD23 443 aa18.8■□□□□ 0.6
SRRM4-204ENST00000641899 TAOK2Q9UL54 1235 aa18.8■□□□□ 0.6
SRRM4-204ENST00000641899 GABRQQ9UN88 632 aa18.8■□□□□ 0.6
SRRM4-204ENST00000641899 SEMA3EO15041 775 aa18.79■□□□□ 0.6
SRRM4-204ENST00000641899 ENTPD3O75355 529 aa18.79■□□□□ 0.6
SRRM4-204ENST00000641899 NFIAQ12857 509 aa18.79■□□□□ 0.6
SRRM4-204ENST00000641899 ANKLE1Q8NAG6 615 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms