RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 SLC34A2O95436 690 aa20.79■□□□□ 0.92
PHGDH-213ENST00000641272 CT47B1P0C2W7 299 aaPredicted RBP20.79■□□□□ 0.92
PHGDH-213ENST00000641272 INPP5BP32019 993 aa20.79■□□□□ 0.92
PHGDH-213ENST00000641272 RARSP54136 660 aaKnown RBP20.79■□□□□ 0.92
PHGDH-213ENST00000641272 FKBP1CQ5VVH2 108 aa20.79■□□□□ 0.92
PHGDH-213ENST00000641272 CDC42EP5Q6NZY7 148 aa20.79■□□□□ 0.92
PHGDH-213ENST00000641272 TNNQ9UQP3 1299 aa20.79■□□□□ 0.92
PHGDH-213ENST00000641272 ECM2O94769 699 aaPredicted RBP20.78■□□□□ 0.92
PHGDH-213ENST00000641272 LDHBP07195 334 aaKnown RBP20.78■□□□□ 0.92
PHGDH-213ENST00000641272 IL15P40933 162 aaPredicted RBP20.78■□□□□ 0.92
PHGDH-213ENST00000641272 DCAF15Q66K64 600 aa20.78■□□□□ 0.92
PHGDH-213ENST00000641272 ERO1BQ86YB8 467 aa20.78■□□□□ 0.92
PHGDH-213ENST00000641272 PTPN22Q9Y2R2 807 aa20.78■□□□□ 0.92
PHGDH-213ENST00000641272 POTEFA5A3E0 1075 aa20.77■□□□□ 0.92
PHGDH-213ENST00000641272 IRF6O14896 467 aa20.77■□□□□ 0.92
PHGDH-213ENST00000641272 MRIQ9BWK5 157 aa20.77■□□□□ 0.92
PHGDH-213ENST00000641272 ZNF341Q9BYN7 854 aa20.77■□□□□ 0.92
PHGDH-213ENST00000641272 ZFYVE28Q9HCC9 887 aa20.77■□□□□ 0.92
PHGDH-213ENST00000641272 GNL3LQ9NVN8 582 aaKnown RBP20.77■□□□□ 0.92
PHGDH-213ENST00000641272 FBXO3Q9UK99 471 aa20.77■□□□□ 0.92
PHGDH-213ENST00000641272 BTBD19C9JJ37 291 aa20.76■□□□□ 0.91
PHGDH-213ENST00000641272 CCDC102BQ68D86 513 aa20.76■□□□□ 0.91
PHGDH-213ENST00000641272 FAM151AQ8WW52 585 aa20.76■□□□□ 0.91
PHGDH-213ENST00000641272 HOOK2Q96ED9 719 aa20.76■□□□□ 0.91
PHGDH-213ENST00000641272 CCER2I3L3R5 266 aa20.75■□□□□ 0.91
PHGDH-213ENST00000641272 SRGAP3O43295 1099 aa20.75■□□□□ 0.91
PHGDH-213ENST00000641272 CETPP11597 493 aa20.75■□□□□ 0.91
PHGDH-213ENST00000641272 PPIL2Q13356 520 aa20.75■□□□□ 0.91
PHGDH-213ENST00000641272 RASGRF1Q13972 1273 aa20.75■□□□□ 0.91
PHGDH-213ENST00000641272 PRPF38BQ5VTL8 546 aaKnown RBP20.75■□□□□ 0.91
PHGDH-213ENST00000641272 COPRSQ9NQ92 184 aa20.75■□□□□ 0.91
PHGDH-213ENST00000641272 USP40Q9NVE5 1235 aa20.75■□□□□ 0.91
PHGDH-213ENST00000641272 FAM198AQ9UFP1 575 aa20.75■□□□□ 0.91
PHGDH-213ENST00000641272 DENND2AQ9ULE3 1009 aa20.75■□□□□ 0.91
PHGDH-213ENST00000641272 SNAPC2Q13487 334 aa20.74■□□□□ 0.91
PHGDH-213ENST00000641272 ZFPM1Q8IX07 1006 aa20.74■□□□□ 0.91
PHGDH-213ENST00000641272 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.74■□□□□ 0.91
PHGDH-213ENST00000641272 ARHGAP39Q9C0H5 1083 aa20.74■□□□□ 0.91
PHGDH-213ENST00000641272 PTCH2Q9Y6C5 1203 aa20.74■□□□□ 0.91
PHGDH-213ENST00000641272 SALL1Q9NSC2 1324 aa20.74■□□□□ 0.91
PHGDH-213ENST00000641272 RFX7Q2KHR2 1363 aa20.73■□□□□ 0.91
PHGDH-213ENST00000641272 TIMM10P62072 90 aa20.73■□□□□ 0.91
PHGDH-213ENST00000641272 TFCP2Q12800 502 aa20.73■□□□□ 0.91
PHGDH-213ENST00000641272 DZIP1Q86YF9 867 aaKnown RBP20.73■□□□□ 0.91
PHGDH-213ENST00000641272 FRAT1Q92837 279 aaPredicted RBP20.73■□□□□ 0.91
PHGDH-213ENST00000641272 ABCF2Q9UG63 623 aa20.73■□□□□ 0.91
PHGDH-213ENST00000641272 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.73■□□□□ 0.91
PHGDH-213ENST00000641272 DOCK1Q14185 1865 aa20.73■□□□□ 0.91
PHGDH-213ENST00000641272 A0A1B0GUL7 405 aa20.72■□□□□ 0.91
PHGDH-213ENST00000641272 SEMA3EO15041 775 aa20.72■□□□□ 0.91
PHGDH-213ENST00000641272 INTS3Q68E01 1043 aaKnown RBP20.72■□□□□ 0.91
PHGDH-213ENST00000641272 CLUAP1Q96AJ1 413 aa20.72■□□□□ 0.91
PHGDH-213ENST00000641272 HDAC5Q9UQL6 1122 aa20.72■□□□□ 0.91
PHGDH-213ENST00000641272 CENPFP49454 3210 aa20.71■□□□□ 0.91
PHGDH-213ENST00000641272 MYCP01106 439 aaPredicted RBP20.71■□□□□ 0.91
PHGDH-213ENST00000641272 GNAI3P08754 354 aa20.71■□□□□ 0.91
PHGDH-213ENST00000641272 SLURP2P0DP57 97 aa20.71■□□□□ 0.91
PHGDH-213ENST00000641272 TRIM27P14373 513 aa20.71■□□□□ 0.91
PHGDH-213ENST00000641272 RGS3P49796 1198 aa20.71■□□□□ 0.91
PHGDH-213ENST00000641272 ARMC5Q96C12 935 aa20.71■□□□□ 0.91
PHGDH-213ENST00000641272 ATRNL1Q5VV63 1379 aa20.71■□□□□ 0.91
PHGDH-213ENST00000641272 KIAA0100Q14667 2235 aaKnown RBP20.7■□□□□ 0.9
PHGDH-213ENST00000641272 WDHD1O75717 1129 aaPredicted RBP20.7■□□□□ 0.9
PHGDH-213ENST00000641272 BCAR3O75815 825 aa20.7■□□□□ 0.9
PHGDH-213ENST00000641272 PPATQ06203 517 aa20.7■□□□□ 0.9
PHGDH-213ENST00000641272 PICALMQ13492 652 aa20.7■□□□□ 0.9
PHGDH-213ENST00000641272 PI16Q6UXB8 463 aa20.7■□□□□ 0.9
PHGDH-213ENST00000641272 XAGE2Q96GT9 111 aa20.7■□□□□ 0.9
PHGDH-213ENST00000641272 GAKO14976 1311 aa20.7■□□□□ 0.9
PHGDH-213ENST00000641272 PTPRFP10586 1907 aa20.69■□□□□ 0.9
PHGDH-213ENST00000641272 TLR2O60603 784 aa20.69■□□□□ 0.9
PHGDH-213ENST00000641272 BTDP43251 543 aa20.69■□□□□ 0.9
PHGDH-213ENST00000641272 SLC9C1Q4G0N8 1177 aa20.69■□□□□ 0.9
PHGDH-213ENST00000641272 ZSCAN29Q8IWY8 852 aaPredicted RBP20.69■□□□□ 0.9
PHGDH-213ENST00000641272 ZGPATQ8N5A5 531 aaKnown RBP20.69■□□□□ 0.9
PHGDH-213ENST00000641272 CPA4Q9UI42 421 aa20.69■□□□□ 0.9
PHGDH-213ENST00000641272 MAST2Q6P0Q8 1798 aa20.69■□□□□ 0.9
PHGDH-213ENST00000641272 LACTBP83111 547 aaPredicted RBP20.68■□□□□ 0.9
PHGDH-213ENST00000641272 ARHGAP45Q92619 1136 aa20.68■□□□□ 0.9
PHGDH-213ENST00000641272 NEUROD6Q96NK8 337 aa20.68■□□□□ 0.9
PHGDH-213ENST00000641272 DDX4Q9NQI0 724 aaKnown RBP20.68■□□□□ 0.9
PHGDH-213ENST00000641272 ZNF112Q9UJU3 913 aa20.68■□□□□ 0.9
PHGDH-213ENST00000641272 MROH7-TTC4A0A0A0MT08 1334 aa20.68■□□□□ 0.9
PHGDH-213ENST00000641272 PHIPQ8WWQ0 1821 aa20.67■□□□□ 0.9
PHGDH-213ENST00000641272 PNMA6EA0A0J9YXQ4 647 aa20.67■□□□□ 0.9
PHGDH-213ENST00000641272 EN2P19622 333 aaPredicted RBP20.67■□□□□ 0.9
PHGDH-213ENST00000641272 MTX1Q13505 466 aa20.67■□□□□ 0.9
PHGDH-213ENST00000641272 MVPQ14764 893 aaKnown RBP20.67■□□□□ 0.9
PHGDH-213ENST00000641272 NOL9Q5SY16 702 aaKnown RBP20.67■□□□□ 0.9
PHGDH-213ENST00000641272 ATF7IPQ6VMQ6 1270 aa20.67■□□□□ 0.9
PHGDH-213ENST00000641272 SH3BP5LQ7L8J4 393 aa20.67■□□□□ 0.9
PHGDH-213ENST00000641272 SH3TC2Q8TF17 1288 aa20.67■□□□□ 0.9
PHGDH-213ENST00000641272 ZNF333Q96JL9 665 aa20.67■□□□□ 0.9
PHGDH-213ENST00000641272 ZCCHC17Q9NP64 241 aaKnown RBP20.67■□□□□ 0.9
PHGDH-213ENST00000641272 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.67■□□□□ 0.9
PHGDH-213ENST00000641272 KCNH4Q9UQ05 1017 aa20.67■□□□□ 0.9
PHGDH-213ENST00000641272 PDHXO00330 501 aa20.66■□□□□ 0.9
PHGDH-213ENST00000641272 KIF22Q14807 665 aa20.66■□□□□ 0.9
PHGDH-213ENST00000641272 AKAP2Q9Y2D5 859 aa20.66■□□□□ 0.9
PHGDH-213ENST00000641272 PDS5AQ29RF7 1337 aaKnown RBP20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms