RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 PAK6Q9NQU5 681 aaPredicted RBP10.52□□□□□ -0.73
SCARB2-226ENST00000640916 ZMYND8Q9ULU4 1186 aaPredicted RBP10.52□□□□□ -0.73
SCARB2-226ENST00000640916 MAPK8IP3Q9UPT6 1336 aa10.52□□□□□ -0.73
SCARB2-226ENST00000640916 COL2A1P02458 1487 aaPredicted RBP10.51□□□□□ -0.73
SCARB2-226ENST00000640916 FMNL1O95466 1100 aaPredicted RBP10.51□□□□□ -0.73
SCARB2-226ENST00000640916 HOXD10P28358 340 aa10.51□□□□□ -0.73
SCARB2-226ENST00000640916 MAGEA10P43363 369 aaPredicted RBP10.51□□□□□ -0.73
SCARB2-226ENST00000640916 UBXN2AP68543 259 aa10.51□□□□□ -0.73
SCARB2-226ENST00000640916 ERO1BQ86YB8 467 aa10.51□□□□□ -0.73
SCARB2-226ENST00000640916 DEFB118Q96PH6 123 aa10.51□□□□□ -0.73
SCARB2-226ENST00000640916 METTL22Q9BUU2 404 aaPredicted RBP10.51□□□□□ -0.73
SCARB2-226ENST00000640916 JAG2Q9Y219 1238 aa10.51□□□□□ -0.73
SCARB2-226ENST00000640916 RPTORQ8N122 1335 aa10.51□□□□□ -0.73
SCARB2-226ENST00000640916 DDX60LQ5H9U9 1706 aaKnown RBP10.5□□□□□ -0.73
SCARB2-226ENST00000640916 STK25O00506 426 aa10.5□□□□□ -0.73
SCARB2-226ENST00000640916 TFRCP02786 760 aaKnown RBP10.5□□□□□ -0.73
SCARB2-226ENST00000640916 IGKV5-2P06315 115 aa10.5□□□□□ -0.73
SCARB2-226ENST00000640916 BCRP11274 1271 aa10.5□□□□□ -0.73
SCARB2-226ENST00000640916 CHRNDQ07001 517 aa10.5□□□□□ -0.73
SCARB2-226ENST00000640916 PPIL2Q13356 520 aa10.5□□□□□ -0.73
SCARB2-226ENST00000640916 SNAPC2Q13487 334 aa10.5□□□□□ -0.73
SCARB2-226ENST00000640916 DUSP27Q5VZP5 1158 aa10.5□□□□□ -0.73
SCARB2-226ENST00000640916 C7orf61Q8IZ16 206 aa10.5□□□□□ -0.73
SCARB2-226ENST00000640916 SLAIN1Q8ND83 568 aa10.5□□□□□ -0.73
SCARB2-226ENST00000640916 ZKSCAN4Q969J2 545 aaPredicted RBP10.5□□□□□ -0.73
SCARB2-226ENST00000640916 BIN2Q9UBW5 565 aaPredicted RBP10.5□□□□□ -0.73
SCARB2-226ENST00000640916 RAPGEFL1Q9UHV5 662 aa10.5□□□□□ -0.73
SCARB2-226ENST00000640916 TRIM35Q9UPQ4 493 aa10.5□□□□□ -0.73
SCARB2-226ENST00000640916 CSADQ9Y600 493 aa10.5□□□□□ -0.73
SCARB2-226ENST00000640916 CDH23Q9H251 3354 aa10.49□□□□□ -0.73
SCARB2-226ENST00000640916 TCP10L2B9ZVM9 353 aa10.49□□□□□ -0.73
SCARB2-226ENST00000640916 PDHXO00330 501 aa10.49□□□□□ -0.73
SCARB2-226ENST00000640916 INHAP05111 366 aa10.49□□□□□ -0.73
SCARB2-226ENST00000640916 ELNP15502 786 aa10.49□□□□□ -0.73
SCARB2-226ENST00000640916 SYN1P17600 705 aa10.49□□□□□ -0.73
SCARB2-226ENST00000640916 COL9A1P20849 921 aa10.49□□□□□ -0.73
SCARB2-226ENST00000640916 GOLGA2Q08379 1002 aa10.49□□□□□ -0.73
SCARB2-226ENST00000640916 TNFAIP1Q13829 316 aa10.49□□□□□ -0.73
SCARB2-226ENST00000640916 FAM109BQ6ICB4 259 aaPredicted RBP10.49□□□□□ -0.73
SCARB2-226ENST00000640916 ANKRD23Q86SG2 305 aa10.49□□□□□ -0.73
SCARB2-226ENST00000640916 ANKRD2Q9GZV1 360 aa10.49□□□□□ -0.73
SCARB2-226ENST00000640916 ADCY3O60266 1144 aa10.48□□□□□ -0.73
SCARB2-226ENST00000640916 TAF5LO75529 589 aa10.48□□□□□ -0.73
SCARB2-226ENST00000640916 WDHD1O75717 1129 aaPredicted RBP10.48□□□□□ -0.73
SCARB2-226ENST00000640916 CAPN2P17655 700 aa10.48□□□□□ -0.73
SCARB2-226ENST00000640916 RBM5P52756 815 aaKnown RBP eCLIP10.48□□□□□ -0.73
SCARB2-226ENST00000640916 NECAB2Q7Z6G3 386 aa10.48□□□□□ -0.73
SCARB2-226ENST00000640916 DZIP1LQ8IYY4 767 aaKnown RBP10.48□□□□□ -0.73
SCARB2-226ENST00000640916 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.48□□□□□ -0.73
SCARB2-226ENST00000640916 PNNQ9H307 717 aaKnown RBP10.48□□□□□ -0.73
SCARB2-226ENST00000640916 LAS1LQ9Y4W2 734 aaKnown RBP10.48□□□□□ -0.73
SCARB2-226ENST00000640916 H7C1W4 665 aa10.47□□□□□ -0.73
SCARB2-226ENST00000640916 ITGA6P23229 1130 aa10.47□□□□□ -0.73
SCARB2-226ENST00000640916 IGHMBP2P38935 993 aaKnown RBP10.47□□□□□ -0.73
SCARB2-226ENST00000640916 FLT3LGP49771 235 aa10.47□□□□□ -0.73
SCARB2-226ENST00000640916 GRIK5Q16478 980 aa10.47□□□□□ -0.73
SCARB2-226ENST00000640916 GPAT2Q6NUI2 795 aa10.47□□□□□ -0.73
SCARB2-226ENST00000640916 PXYLP1Q8TE99 480 aa10.47□□□□□ -0.73
SCARB2-226ENST00000640916 WRNIP1Q96S55 665 aa10.47□□□□□ -0.73
SCARB2-226ENST00000640916 PCGF6Q9BYE7 350 aa10.47□□□□□ -0.73
SCARB2-226ENST00000640916 UBE2OQ9C0C9 1292 aaKnown RBP10.47□□□□□ -0.73
SCARB2-226ENST00000640916 SERPINA10Q9UK55 444 aa10.47□□□□□ -0.73
SCARB2-226ENST00000640916 KCNH4Q9UQ05 1017 aa10.47□□□□□ -0.73
SCARB2-226ENST00000640916 DNAH12Q6ZR08 3092 aa10.47□□□□□ -0.73
SCARB2-226ENST00000640916 CSF1RP07333 972 aa10.46□□□□□ -0.73
SCARB2-226ENST00000640916 INPP5BP32019 993 aa10.46□□□□□ -0.73
SCARB2-226ENST00000640916 CASP7P55210 303 aa10.46□□□□□ -0.73
SCARB2-226ENST00000640916 FCGRTP55899 365 aa10.46□□□□□ -0.73
SCARB2-226ENST00000640916 PPATQ06203 517 aa10.46□□□□□ -0.73
SCARB2-226ENST00000640916 LMOD3Q0VAK6 560 aa10.46□□□□□ -0.73
SCARB2-226ENST00000640916 IRF5Q13568 498 aa10.46□□□□□ -0.73
SCARB2-226ENST00000640916 BBXQ8WY36 941 aaPredicted RBP10.46□□□□□ -0.73
SCARB2-226ENST00000640916 PLA2G12BQ9BX93 195 aa10.46□□□□□ -0.73
SCARB2-226ENST00000640916 TTF2Q9UNY4 1162 aaKnown RBP10.46□□□□□ -0.73
SCARB2-226ENST00000640916 MAP3K2Q9Y2U5 619 aa10.46□□□□□ -0.73
SCARB2-226ENST00000640916 STK24Q9Y6E0 443 aa10.46□□□□□ -0.73
SCARB2-226ENST00000640916 FAM205AQ6ZU69 1335 aa10.46□□□□□ -0.73
SCARB2-226ENST00000640916 PTPRFP10586 1907 aa10.46□□□□□ -0.74
SCARB2-226ENST00000640916 TTC28Q96AY4 2481 aa10.46□□□□□ -0.74
SCARB2-226ENST00000640916 CYP2C8P10632 490 aa10.45□□□□□ -0.74
SCARB2-226ENST00000640916 KCNJ4P48050 445 aa10.45□□□□□ -0.74
SCARB2-226ENST00000640916 CACNB3P54284 484 aa10.45□□□□□ -0.74
SCARB2-226ENST00000640916 TRIM26Q12899 539 aaPredicted RBP10.45□□□□□ -0.74
SCARB2-226ENST00000640916 CWF19L2Q2TBE0 894 aaKnown RBP10.45□□□□□ -0.74
SCARB2-226ENST00000640916 FBXO22Q8NEZ5 403 aa10.45□□□□□ -0.74
SCARB2-226ENST00000640916 FAM161BQ96MY7 647 aa10.45□□□□□ -0.74
SCARB2-226ENST00000640916 MBIPQ9NS73 344 aa10.45□□□□□ -0.74
SCARB2-226ENST00000640916 PLXNB2O15031 1838 aa10.44□□□□□ -0.74
SCARB2-226ENST00000640916 PFASO15067 1338 aa10.44□□□□□ -0.74
SCARB2-226ENST00000640916 NEURL1BA8MQ27 555 aa10.44□□□□□ -0.74
SCARB2-226ENST00000640916 ZNF853P0CG23 659 aa10.44□□□□□ -0.74
SCARB2-226ENST00000640916 CRKP46108 304 aa10.44□□□□□ -0.74
SCARB2-226ENST00000640916 NEUROD2Q15784 382 aa10.44□□□□□ -0.74
SCARB2-226ENST00000640916 MFSD14BQ5SR56 506 aa10.44□□□□□ -0.74
SCARB2-226ENST00000640916 IER5LQ5T953 404 aa10.44□□□□□ -0.74
SCARB2-226ENST00000640916 UBE3BQ7Z3V4 1068 aa10.44□□□□□ -0.74
SCARB2-226ENST00000640916 ZNF804AQ7Z570 1209 aa10.44□□□□□ -0.74
SCARB2-226ENST00000640916 EFCAB3Q8N7B9 438 aa10.44□□□□□ -0.74
SCARB2-226ENST00000640916 ANKLE1Q8NAG6 615 aa10.44□□□□□ -0.74
SCARB2-226ENST00000640916 TDRD7Q8NHU6 1098 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms