RNA–Protein interactions for RNA: ENST00000640552.1

GFAP-237, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 3,573 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-237ENST00000640552 ANKIB1Q9P2G1 1089 aa16.28■□□□□ 0.2
GFAP-237ENST00000640552 ERVV-1B6SEH8 477 aa16.28■□□□□ 0.2
GFAP-237ENST00000640552 KRT40Q6A162 431 aa16.28■□□□□ 0.2
GFAP-237ENST00000640552 CELF1Q92879 486 aaKnown RBP16.28■□□□□ 0.2
GFAP-237ENST00000640552 FBXO3Q9UK99 471 aa16.28■□□□□ 0.2
GFAP-237ENST00000640552 CDHR2Q9BYE9 1310 aa16.28■□□□□ 0.2
GFAP-237ENST00000640552 MRC1P22897 1456 aa16.28■□□□□ 0.2
GFAP-237ENST00000640552 SIPA1L3O60292 1781 aaPredicted RBP16.28■□□□□ 0.2
GFAP-237ENST00000640552 SETDB2Q96T68 719 aa16.28■□□□□ 0.2
GFAP-237ENST00000640552 ELP1O95163 1332 aa16.27■□□□□ 0.2
GFAP-237ENST00000640552 CAMTA2O94983 1202 aa16.27■□□□□ 0.2
GFAP-237ENST00000640552 SAFBQ15424 915 aaKnown RBP eCLIP16.27■□□□□ 0.2
GFAP-237ENST00000640552 MYSM1Q5VVJ2 828 aa16.27■□□□□ 0.2
GFAP-237ENST00000640552 GPR101Q96P66 508 aaPredicted RBP16.27■□□□□ 0.2
GFAP-237ENST00000640552 ALDH8A1Q9H2A2 487 aaPredicted RBP16.27■□□□□ 0.2
GFAP-237ENST00000640552 PYCARDQ9ULZ3 195 aa16.27■□□□□ 0.2
GFAP-237ENST00000640552 HPS5Q9UPZ3 1129 aa16.27■□□□□ 0.2
GFAP-237ENST00000640552 TUBGCP6Q96RT7 1819 aa16.27■□□□□ 0.2
GFAP-237ENST00000640552 PATL2C9JE40 543 aaKnown RBP16.27■□□□□ 0.2
GFAP-237ENST00000640552 SSRP1Q08945 709 aaKnown RBP16.27■□□□□ 0.2
GFAP-237ENST00000640552 UBE3CQ15386 1083 aa16.27■□□□□ 0.2
GFAP-237ENST00000640552 C16orf45Q96MC5 204 aaPredicted RBP16.27■□□□□ 0.2
GFAP-237ENST00000640552 EPB41L4AQ9HCS5 686 aaPredicted RBP16.27■□□□□ 0.2
GFAP-237ENST00000640552 AATFQ9NY61 560 aaKnown RBP eCLIP16.27■□□□□ 0.2
GFAP-237ENST00000640552 TRIM22Q8IYM9 498 aa16.27■□□□□ 0.19
GFAP-237ENST00000640552 SPATA31A1Q5TZJ5 1347 aa16.26■□□□□ 0.19
GFAP-237ENST00000640552 MAGEB6P1A0A0J9YX57 407 aa16.26■□□□□ 0.19
GFAP-237ENST00000640552 KLRK1P26718 216 aa16.26■□□□□ 0.19
GFAP-237ENST00000640552 FAM160A1Q05DH4 1040 aa16.26■□□□□ 0.19
GFAP-237ENST00000640552 HS1BP3Q53T59 392 aa16.26■□□□□ 0.19
GFAP-237ENST00000640552 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.26■□□□□ 0.19
GFAP-237ENST00000640552 CDKL5O76039 1030 aa16.26■□□□□ 0.19
GFAP-237ENST00000640552 PARP10Q53GL7 1025 aa16.26■□□□□ 0.19
GFAP-237ENST00000640552 AKNAD1Q5T1N1 836 aa16.26■□□□□ 0.19
GFAP-237ENST00000640552 VGLL2Q8N8G2 317 aa16.26■□□□□ 0.19
GFAP-237ENST00000640552 NBPF3Q9H094 633 aa16.26■□□□□ 0.19
GFAP-237ENST00000640552 RCOR1Q9UKL0 485 aa16.26■□□□□ 0.19
GFAP-237ENST00000640552 RIC1Q4ADV7 1423 aa16.26■□□□□ 0.19
GFAP-237ENST00000640552 SLC3A2P08195 630 aaKnown RBP16.25■□□□□ 0.19
GFAP-237ENST00000640552 TBC1D9BQ66K14 1250 aa16.25■□□□□ 0.19
GFAP-237ENST00000640552 SLC51AQ86UW1 340 aa16.25■□□□□ 0.19
GFAP-237ENST00000640552 CEP57L1Q8IYX8 460 aa16.25■□□□□ 0.19
GFAP-237ENST00000640552 NLRP3Q96P20 1036 aa16.25■□□□□ 0.19
GFAP-237ENST00000640552 TRMT1Q9NXH9 659 aaKnown RBP16.25■□□□□ 0.19
GFAP-237ENST00000640552 BTBD18B2RXH4 712 aa16.25■□□□□ 0.19
GFAP-237ENST00000640552 ARID5BQ14865 1188 aa16.25■□□□□ 0.19
GFAP-237ENST00000640552 RTN1Q16799 776 aa16.25■□□□□ 0.19
GFAP-237ENST00000640552 ANO1Q5XXA6 986 aa16.25■□□□□ 0.19
GFAP-237ENST00000640552 ILDR1Q86SU0 546 aaPredicted RBP16.25■□□□□ 0.19
GFAP-237ENST00000640552 FUCA2Q9BTY2 467 aa16.25■□□□□ 0.19
GFAP-237ENST00000640552 GUCY1A2P33402 732 aa16.25■□□□□ 0.19
GFAP-237ENST00000640552 LINC00116Q8NCU8 138 aa16.25■□□□□ 0.19
GFAP-237ENST00000640552 RFX7Q2KHR2 1363 aa16.24■□□□□ 0.19
GFAP-237ENST00000640552 GSG1L2A8MUP6 293 aa16.24■□□□□ 0.19
GFAP-237ENST00000640552 STX1AQ16623 288 aa16.24■□□□□ 0.19
GFAP-237ENST00000640552 FAM47AQ5JRC9 791 aa16.24■□□□□ 0.19
GFAP-237ENST00000640552 SH2B2O14492 632 aaPredicted RBP16.24■□□□□ 0.19
GFAP-237ENST00000640552 LMOD1P29536 600 aaPredicted RBP16.24■□□□□ 0.19
GFAP-237ENST00000640552 CCNL1Q9UK58 526 aaPredicted RBP16.24■□□□□ 0.19
GFAP-237ENST00000640552 ADGRA1Q86SQ6 560 aa16.23■□□□□ 0.19
GFAP-237ENST00000640552 ANO10Q9NW15 660 aa16.23■□□□□ 0.19
GFAP-237ENST00000640552 NTSR2O95665 410 aa16.23■□□□□ 0.19
GFAP-237ENST00000640552 SYKP43405 635 aa16.23■□□□□ 0.19
GFAP-237ENST00000640552 NR5A1Q13285 461 aa16.23■□□□□ 0.19
GFAP-237ENST00000640552 LINC00301Q8NCQ3 95 aa16.23■□□□□ 0.19
GFAP-237ENST00000640552 N4BP2Q86UW6 1770 aaPredicted RBP16.23■□□□□ 0.19
GFAP-237ENST00000640552 USP17L12C9JPN9 530 aa16.22■□□□□ 0.19
GFAP-237ENST00000640552 USP17L21D6R901 530 aa16.22■□□□□ 0.19
GFAP-237ENST00000640552 TOM1O60784 492 aa16.22■□□□□ 0.19
GFAP-237ENST00000640552 ZNF202O95125 648 aa16.22■□□□□ 0.19
GFAP-237ENST00000640552 KIF23Q02241 960 aaPredicted RBP16.22■□□□□ 0.19
GFAP-237ENST00000640552 EVX2Q03828 476 aa16.22■□□□□ 0.19
GFAP-237ENST00000640552 SMARCC1Q92922 1105 aaPredicted RBP16.22■□□□□ 0.19
GFAP-237ENST00000640552 RFC4P35249 363 aa16.22■□□□□ 0.19
GFAP-237ENST00000640552 TPD52L1Q16890 204 aaPredicted RBP16.22■□□□□ 0.19
GFAP-237ENST00000640552 KCNG4Q8TDN1 519 aa16.22■□□□□ 0.19
GFAP-237ENST00000640552 TNS2Q63HR2 1409 aa16.22■□□□□ 0.19
GFAP-237ENST00000640552 JCADQ9P266 1359 aa16.22■□□□□ 0.19
GFAP-237ENST00000640552 ZNF500O60304 480 aaPredicted RBP16.22■□□□□ 0.19
GFAP-237ENST00000640552 ARID4AP29374 1257 aaPredicted RBP16.22■□□□□ 0.19
GFAP-237ENST00000640552 PPARAQ07869 468 aa16.22■□□□□ 0.19
GFAP-237ENST00000640552 DZIP1Q86YF9 867 aaKnown RBP16.22■□□□□ 0.19
GFAP-237ENST00000640552 DIS3L2Q8IYB7 885 aaKnown RBP16.22■□□□□ 0.19
GFAP-237ENST00000640552 DPCR1Q3MIW9 517 aa16.21■□□□□ 0.19
GFAP-237ENST00000640552 KRT23Q9C075 422 aa16.21■□□□□ 0.19
GFAP-237ENST00000640552 VPS54Q9P1Q0 977 aa16.21■□□□□ 0.19
GFAP-237ENST00000640552 PFKFB1P16118 471 aa16.21■□□□□ 0.19
GFAP-237ENST00000640552 RPS8P62241 208 aaKnown RBP16.21■□□□□ 0.19
GFAP-237ENST00000640552 CABP5Q9NP86 173 aa16.21■□□□□ 0.19
GFAP-237ENST00000640552 ZMYM6O95789 1325 aa16.21■□□□□ 0.19
GFAP-237ENST00000640552 NMT2O60551 498 aa16.21■□□□□ 0.18
GFAP-237ENST00000640552 ZNF75DP51815 510 aa16.21■□□□□ 0.18
GFAP-237ENST00000640552 CDCA7Q9BWT1 371 aaPredicted RBP16.21■□□□□ 0.18
GFAP-237ENST00000640552 NAT10Q9H0A0 1025 aaKnown RBP16.21■□□□□ 0.18
GFAP-237ENST00000640552 LY9Q9HBG7 655 aa16.21■□□□□ 0.18
GFAP-237ENST00000640552 RAD21O60216 631 aa16.2■□□□□ 0.18
GFAP-237ENST00000640552 PRDX5P30044 214 aa16.2■□□□□ 0.18
GFAP-237ENST00000640552 TMEM87BQ96K49 555 aa16.2■□□□□ 0.18
GFAP-237ENST00000640552 AGXT2Q9BYV1 514 aa16.2■□□□□ 0.18
GFAP-237ENST00000640552 MINPP1Q9UNW1 487 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms