RNA–Protein interactions for RNA: ENST00000640413.1

AP3S1-209, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5 BASIC

Gene AP3S1, Length 489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-209ENST00000640413 ARID3CA6NKF2 412 aa7.64□□□□□ -1.19
AP3S1-209ENST00000640413 PHLDB3Q6NSJ2 640 aa7.64□□□□□ -1.19
AP3S1-209ENST00000640413 ZNF576Q9H609 170 aa7.64□□□□□ -1.19
AP3S1-209ENST00000640413 LIG1P18858 919 aa7.63□□□□□ -1.19
AP3S1-209ENST00000640413 CDK5R2Q13319 367 aa7.63□□□□□ -1.19
AP3S1-209ENST00000640413 CYP27C1Q4G0S4 372 aa7.63□□□□□ -1.19
AP3S1-209ENST00000640413 STK11IPQ8N1F8 1099 aa7.63□□□□□ -1.19
AP3S1-209ENST00000640413 PLD6Q8N2A8 252 aaKnown RBP7.63□□□□□ -1.19
AP3S1-209ENST00000640413 FAM181AQ8N9Y4 354 aa7.63□□□□□ -1.19
AP3S1-209ENST00000640413 DDX54Q8TDD1 881 aaKnown RBP7.63□□□□□ -1.19
AP3S1-209ENST00000640413 BIN1O00499 593 aa7.62□□□□□ -1.19
AP3S1-209ENST00000640413 FAM87AP0C7U9 286 aa7.62□□□□□ -1.19
AP3S1-209ENST00000640413 CD8BP10966 210 aa7.62□□□□□ -1.19
AP3S1-209ENST00000640413 KIAA0319Q5VV43 1072 aa7.62□□□□□ -1.19
AP3S1-209ENST00000640413 WDR89Q96FK6 387 aaPredicted RBP7.62□□□□□ -1.19
AP3S1-209ENST00000640413 KRTAP4-9Q9BYQ8 210 aa7.62□□□□□ -1.19
AP3S1-209ENST00000640413 MTMR7Q9Y216 660 aa7.62□□□□□ -1.19
AP3S1-209ENST00000640413 TMPRSS2O15393 492 aa7.61□□□□□ -1.19
AP3S1-209ENST00000640413 CD96P40200 585 aa7.61□□□□□ -1.19
AP3S1-209ENST00000640413 ZC3H12CQ9C0D7 883 aaKnown RBP7.61□□□□□ -1.19
AP3S1-209ENST00000640413 EHD4Q9H223 541 aa7.61□□□□□ -1.19
AP3S1-209ENST00000640413 U3KQE9 123 aa7.61□□□□□ -1.19
AP3S1-209ENST00000640413 RNASE1P07998 156 aaKnown RBP7.6□□□□□ -1.19
AP3S1-209ENST00000640413 FUT4P22083 530 aa7.6□□□□□ -1.19
AP3S1-209ENST00000640413 ITPKAP23677 461 aa7.6□□□□□ -1.19
AP3S1-209ENST00000640413 ZNF157P51786 506 aaPredicted RBP7.6□□□□□ -1.19
AP3S1-209ENST00000640413 LCE4AQ5TA78 99 aa7.6□□□□□ -1.19
AP3S1-209ENST00000640413 NETO1Q8TDF5 533 aa7.6□□□□□ -1.19
AP3S1-209ENST00000640413 MISP3Q96FF7 219 aa7.6□□□□□ -1.19
AP3S1-209ENST00000640413 CCDC86Q9H6F5 360 aaKnown RBP7.6□□□□□ -1.19
AP3S1-209ENST00000640413 RC3H2Q9HBD1 1191 aaKnown RBP7.6□□□□□ -1.19
AP3S1-209ENST00000640413 ADAMTS6Q9UKP5 1117 aa7.6□□□□□ -1.19
AP3S1-209ENST00000640413 ATG4DQ86TL0 474 aaPredicted RBP7.59□□□□□ -1.19
AP3S1-209ENST00000640413 GLIS3Q8NEA6 775 aa7.59□□□□□ -1.19
AP3S1-209ENST00000640413 PIDD1Q9HB75 910 aa7.59□□□□□ -1.19
AP3S1-209ENST00000640413 NPHS2Q9NP85 383 aa7.59□□□□□ -1.19
AP3S1-209ENST00000640413 MBNL3Q9NUK0 354 aaKnown RBP7.59□□□□□ -1.19
AP3S1-209ENST00000640413 CRIM1Q9NZV1 1036 aa7.59□□□□□ -1.19
AP3S1-209ENST00000640413 AP3B2Q13367 1082 aa7.58□□□□□ -1.2
AP3S1-209ENST00000640413 ORC1Q13415 861 aa7.58□□□□□ -1.2
AP3S1-209ENST00000640413 FAM168AQ92567 244 aa7.58□□□□□ -1.2
AP3S1-209ENST00000640413 FANCD2OSQ96PS1 177 aa7.58□□□□□ -1.2
AP3S1-209ENST00000640413 SYNGAP1Q96PV0 1343 aa7.57□□□□□ -1.2
AP3S1-209ENST00000640413 DBX1A6NMT0 343 aa7.57□□□□□ -1.2
AP3S1-209ENST00000640413 ZNF862O60290 1169 aa7.57□□□□□ -1.2
AP3S1-209ENST00000640413 LEFTY1O75610 366 aa7.57□□□□□ -1.2
AP3S1-209ENST00000640413 FARP2O94887 1054 aaPredicted RBP7.57□□□□□ -1.2
AP3S1-209ENST00000640413 PI4K2BQ8TCG2 481 aa7.57□□□□□ -1.2
AP3S1-209ENST00000640413 BRPF3Q9ULD4 1205 aa7.57□□□□□ -1.2
AP3S1-209ENST00000640413 ID3Q02535 119 aa7.56□□□□□ -1.2
AP3S1-209ENST00000640413 FAAP100Q0VG06 881 aa7.56□□□□□ -1.2
AP3S1-209ENST00000640413 SMYD4Q8IYR2 804 aaPredicted RBP7.56□□□□□ -1.2
AP3S1-209ENST00000640413 LRRN4CLQ8ND94 238 aa7.56□□□□□ -1.2
AP3S1-209ENST00000640413 ATXN3LQ9H3M9 355 aa7.56□□□□□ -1.2
AP3S1-209ENST00000640413 ABCB6Q9NP58 842 aa7.56□□□□□ -1.2
AP3S1-209ENST00000640413 DISC1Q9NRI5 854 aa7.56□□□□□ -1.2
AP3S1-209ENST00000640413 VAV3Q9UKW4 847 aa7.56□□□□□ -1.2
AP3S1-209ENST00000640413 RNGTTO60942 597 aaKnown RBP7.55□□□□□ -1.2
AP3S1-209ENST00000640413 CPNE3O75131 537 aaKnown RBP7.55□□□□□ -1.2
AP3S1-209ENST00000640413 NEFLP07196 543 aa7.55□□□□□ -1.2
AP3S1-209ENST00000640413 SLFN14P0C7P3 912 aa7.55□□□□□ -1.2
AP3S1-209ENST00000640413 PRKCQQ04759 706 aa7.55□□□□□ -1.2
AP3S1-209ENST00000640413 TTLL4Q14679 1199 aa7.55□□□□□ -1.2
AP3S1-209ENST00000640413 AOC3Q16853 763 aa7.55□□□□□ -1.2
AP3S1-209ENST00000640413 ICMTO60725 284 aa7.54□□□□□ -1.2
AP3S1-209ENST00000640413 HCLS1P14317 486 aaPredicted RBP7.54□□□□□ -1.2
AP3S1-209ENST00000640413 PTPN12Q05209 780 aaKnown RBP7.54□□□□□ -1.2
AP3S1-209ENST00000640413 ECM1Q16610 540 aa7.54□□□□□ -1.2
AP3S1-209ENST00000640413 CCDC82Q8N4S0 544 aa7.54□□□□□ -1.2
AP3S1-209ENST00000640413 PLAGL2Q9UPG8 496 aa7.54□□□□□ -1.2
AP3S1-209ENST00000640413 TMEM238LA0A1B0GVL6 79 aa7.53□□□□□ -1.2
AP3S1-209ENST00000640413 GADD45BO75293 160 aaPredicted RBP7.53□□□□□ -1.2
AP3S1-209ENST00000640413 OXCT1P55809 520 aa7.53□□□□□ -1.2
AP3S1-209ENST00000640413 PKN1Q16512 942 aa7.53□□□□□ -1.2
AP3S1-209ENST00000640413 IFI16Q16666 785 aaKnown RBP7.53□□□□□ -1.2
AP3S1-209ENST00000640413 FBLN7Q53RD9 439 aa7.53□□□□□ -1.2
AP3S1-209ENST00000640413 SPOCD1Q6ZMY3 1216 aa7.53□□□□□ -1.2
AP3S1-209ENST00000640413 ARHGAP27Q6ZUM4 889 aa7.53□□□□□ -1.2
AP3S1-209ENST00000640413 KSR1Q8IVT5 923 aa7.53□□□□□ -1.2
AP3S1-209ENST00000640413 TMEM40Q8WWA1 233 aa7.53□□□□□ -1.2
AP3S1-209ENST00000640413 HRASLS5Q96KN8 279 aa7.53□□□□□ -1.2
AP3S1-209ENST00000640413 DUSP23Q9BVJ7 150 aa7.53□□□□□ -1.2
AP3S1-209ENST00000640413 PCDHGC5Q9Y5F6 944 aa7.53□□□□□ -1.2
AP3S1-209ENST00000640413 H3BRB1 525 aa7.52□□□□□ -1.21
AP3S1-209ENST00000640413 PPP1R15AO75807 674 aaPredicted RBP7.52□□□□□ -1.21
AP3S1-209ENST00000640413 KIF4BQ2VIQ3 1234 aa7.52□□□□□ -1.21
AP3S1-209ENST00000640413 RPS26P11Q5JNZ5 115 aaPredicted RBP7.52□□□□□ -1.21
AP3S1-209ENST00000640413 PRPF40BQ6NWY9 871 aaKnown RBP7.52□□□□□ -1.21
AP3S1-209ENST00000640413 CCDC74AQ96AQ1 378 aa7.52□□□□□ -1.21
AP3S1-209ENST00000640413 TUT1Q9H6E5 874 aaKnown RBP7.52□□□□□ -1.21
AP3S1-209ENST00000640413 CEACAM5P06731 702 aa7.51□□□□□ -1.21
AP3S1-209ENST00000640413 GSTP1P09211 210 aaKnown RBP7.51□□□□□ -1.21
AP3S1-209ENST00000640413 ITIH2P19823 946 aa7.51□□□□□ -1.21
AP3S1-209ENST00000640413 SERPINB4P48594 390 aa7.51□□□□□ -1.21
AP3S1-209ENST00000640413 GLYCTKQ8IVS8 523 aa7.51□□□□□ -1.21
AP3S1-209ENST00000640413 PRDM7Q9NQW5 492 aa7.51□□□□□ -1.21
AP3S1-209ENST00000640413 PCOLCE2Q9UKZ9 415 aa7.51□□□□□ -1.21
AP3S1-209ENST00000640413 EIF1AYO14602 144 aaKnown RBP7.5□□□□□ -1.21
AP3S1-209ENST00000640413 NEFMP07197 916 aa7.5□□□□□ -1.21
AP3S1-209ENST00000640413 TOP6BLQ8N6T0 577 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 151.7 ms