RNA–Protein interactions for RNA: ENST00000639895.1

SPIN3-231, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 4,234 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-231	ENST00000639895	STX10	O60499	249 aa		12.8	□□□□□ -0.36
SPIN3-231	ENST00000639895	CCDC178	Q5BJE1	867 aa		12.8	□□□□□ -0.36
SPIN3-231	ENST00000639895	GIGYF2	Q6Y7W6	1299 aa	Known RBP	12.8	□□□□□ -0.36
SPIN3-231	ENST00000639895	CNGA4	Q8IV77	575 aa		12.8	□□□□□ -0.36
SPIN3-231	ENST00000639895	KLC4	Q9NSK0	619 aa		12.8	□□□□□ -0.36
SPIN3-231	ENST00000639895	HMG20B	Q9P0W2	317 aa		12.8	□□□□□ -0.36
SPIN3-231	ENST00000639895	YTHDC2	Q9H6S0	1430 aa	Known RBP	12.8	□□□□□ -0.36
SPIN3-231	ENST00000639895	ABCC4	O15439	1325 aa		12.8	□□□□□ -0.36
SPIN3-231	ENST00000639895	CCT6A	P40227	531 aa	Known RBP	12.8	□□□□□ -0.36
SPIN3-231	ENST00000639895	AFM	P43652	599 aa		12.8	□□□□□ -0.36
SPIN3-231	ENST00000639895	MXRA7	P84157	204 aa		12.8	□□□□□ -0.36
SPIN3-231	ENST00000639895	CCDC6	Q16204	474 aa		12.8	□□□□□ -0.36
SPIN3-231	ENST00000639895	SAMD1	Q6SPF0	538 aa	Predicted RBP	12.8	□□□□□ -0.36
SPIN3-231	ENST00000639895	CCDC170	Q8IYT3	715 aa		12.8	□□□□□ -0.36
SPIN3-231	ENST00000639895	RNF217	Q8TC41	542 aa		12.8	□□□□□ -0.36
SPIN3-231	ENST00000639895	RIN2	Q8WYP3	895 aa	Predicted RBP	12.8	□□□□□ -0.36
SPIN3-231	ENST00000639895	PNMA6E	A0A0J9YXQ4	647 aa		12.8	□□□□□ -0.36
SPIN3-231	ENST00000639895	KIF3C	O14782	793 aa		12.8	□□□□□ -0.36
SPIN3-231	ENST00000639895	SKAP2	O75563	359 aa	Predicted RBP	12.8	□□□□□ -0.36
SPIN3-231	ENST00000639895	GCFC2	P16383	781 aa	Known RBP	12.8	□□□□□ -0.36
SPIN3-231	ENST00000639895	PSEN1	P49768	467 aa		12.8	□□□□□ -0.36
SPIN3-231	ENST00000639895	ALS2CR12	Q96Q35	445 aa		12.8	□□□□□ -0.36
SPIN3-231	ENST00000639895	FUCA2	Q9BTY2	467 aa		12.8	□□□□□ -0.36
SPIN3-231	ENST00000639895	NEFH	P12036	1026 aa		12.79	□□□□□ -0.36
SPIN3-231	ENST00000639895	CCDC129	Q6ZRS4	1044 aa		12.79	□□□□□ -0.36
SPIN3-231	ENST00000639895	CHST3	Q7LGC8	479 aa		12.79	□□□□□ -0.36
SPIN3-231	ENST00000639895	FCHSD1	Q86WN1	690 aa		12.79	□□□□□ -0.36
SPIN3-231	ENST00000639895	LMNTD2	Q8IXW0	634 aa		12.79	□□□□□ -0.36
SPIN3-231	ENST00000639895	TMX4	Q9H1E5	349 aa	Predicted RBP	12.79	□□□□□ -0.36
SPIN3-231	ENST00000639895	AKAP2	Q9Y2D5	859 aa		12.79	□□□□□ -0.36
SPIN3-231	ENST00000639895	EIF4E1B	A6NMX2	242 aa	Known RBP	12.79	□□□□□ -0.36
SPIN3-231	ENST00000639895	CHRM1	P11229	460 aa	Predicted RBP	12.79	□□□□□ -0.36
SPIN3-231	ENST00000639895	VSNL1	P62760	191 aa		12.79	□□□□□ -0.36
SPIN3-231	ENST00000639895	LACTB	P83111	547 aa	Predicted RBP	12.79	□□□□□ -0.36
SPIN3-231	ENST00000639895	HIBCH	Q6NVY1	386 aa	Predicted RBP	12.79	□□□□□ -0.36
SPIN3-231	ENST00000639895	FAM43B	Q6ZT52	329 aa	Predicted RBP	12.79	□□□□□ -0.36
SPIN3-231	ENST00000639895	NCOA5	Q9HCD5	579 aa	Known RBP	12.79	□□□□□ -0.36
SPIN3-231	ENST00000639895		U3KPZ7	1027 aa	Predicted RBP	12.79	□□□□□ -0.36
SPIN3-231	ENST00000639895	ENC1	O14682	589 aa		12.79	□□□□□ -0.36
SPIN3-231	ENST00000639895	HMGB1	P09429	215 aa	Known RBP	12.79	□□□□□ -0.36
SPIN3-231	ENST00000639895	RPS6KB1	P23443	525 aa		12.79	□□□□□ -0.36
SPIN3-231	ENST00000639895	RANBP1	P43487	201 aa		12.79	□□□□□ -0.36
SPIN3-231	ENST00000639895	PTH1R	Q03431	593 aa		12.79	□□□□□ -0.36
SPIN3-231	ENST00000639895	KIF5A	Q12840	1032 aa		12.79	□□□□□ -0.36
SPIN3-231	ENST00000639895	TAF7	Q15545	349 aa	Predicted RBP	12.79	□□□□□ -0.36
SPIN3-231	ENST00000639895	GNPTAB	Q3T906	1256 aa		12.79	□□□□□ -0.36
SPIN3-231	ENST00000639895	TMED8	Q6PL24	325 aa	Predicted RBP	12.79	□□□□□ -0.36
SPIN3-231	ENST00000639895	CCDC82	Q8N4S0	544 aa		12.79	□□□□□ -0.36
SPIN3-231	ENST00000639895	PGBD1	Q96JS3	809 aa		12.79	□□□□□ -0.36
SPIN3-231	ENST00000639895	CARD10	Q9BWT7	1032 aa		12.79	□□□□□ -0.36
SPIN3-231	ENST00000639895	LUC7L	Q9NQ29	371 aa	Known RBP	12.79	□□□□□ -0.36
SPIN3-231	ENST00000639895	GOLGA8K	D6RF30	607 aa		12.78	□□□□□ -0.36
SPIN3-231	ENST00000639895	CUTA	O60888	179 aa		12.78	□□□□□ -0.36
SPIN3-231	ENST00000639895	AIDA	Q96BJ3	306 aa		12.78	□□□□□ -0.36
SPIN3-231	ENST00000639895	SELENOS	Q9BQE4	189 aa		12.78	□□□□□ -0.36
SPIN3-231	ENST00000639895	IRX2	Q9BZI1	471 aa	Predicted RBP	12.78	□□□□□ -0.36
SPIN3-231	ENST00000639895	SAR1B	Q9Y6B6	198 aa		12.78	□□□□□ -0.36
SPIN3-231	ENST00000639895	CYLC1	P35663	651 aa	Predicted RBP	12.78	□□□□□ -0.36
SPIN3-231	ENST00000639895	GGCX	P38435	758 aa		12.78	□□□□□ -0.36
SPIN3-231	ENST00000639895	NDUFA8	P51970	172 aa		12.78	□□□□□ -0.36
SPIN3-231	ENST00000639895	ZC3H6	P61129	1189 aa	Known RBP	12.78	□□□□□ -0.36
SPIN3-231	ENST00000639895	CACNA2D3	Q8IZS8	1091 aa		12.78	□□□□□ -0.36
SPIN3-231	ENST00000639895	ZNF330	Q9Y3S2	320 aa	Predicted RBP	12.78	□□□□□ -0.36
SPIN3-231	ENST00000639895	POGZ	Q7Z3K3	1410 aa		12.78	□□□□□ -0.36
SPIN3-231	ENST00000639895	ZRANB2	O95218	330 aa	Known RBP eCLIP	12.78	□□□□□ -0.36
SPIN3-231	ENST00000639895	TRIM21	P19474	475 aa	Known RBP	12.78	□□□□□ -0.36
SPIN3-231	ENST00000639895	MYO1E	Q12965	1108 aa		12.78	□□□□□ -0.36
SPIN3-231	ENST00000639895	CDC5L	Q99459	802 aa	Known RBP	12.78	□□□□□ -0.36
SPIN3-231	ENST00000639895	PARP3	Q9Y6F1	533 aa		12.78	□□□□□ -0.36
SPIN3-231	ENST00000639895	TLDC2	A0PJX2	215 aa		12.77	□□□□□ -0.36
SPIN3-231	ENST00000639895	SLC27A2	O14975	620 aa		12.77	□□□□□ -0.36
SPIN3-231	ENST00000639895	AKR1B10	O60218	316 aa		12.77	□□□□□ -0.36
SPIN3-231	ENST00000639895	MMP14	P50281	582 aa		12.77	□□□□□ -0.36
SPIN3-231	ENST00000639895	IQCB1	Q15051	598 aa		12.77	□□□□□ -0.36
SPIN3-231	ENST00000639895	NCAPH2	Q6IBW4	605 aa		12.77	□□□□□ -0.36
SPIN3-231	ENST00000639895	ZBTB10	Q96DT7	871 aa		12.77	□□□□□ -0.36
SPIN3-231	ENST00000639895	THOC1	Q96FV9	657 aa	Known RBP	12.77	□□□□□ -0.36
SPIN3-231	ENST00000639895	CTAGE1	Q96RT6	745 aa		12.77	□□□□□ -0.36
SPIN3-231	ENST00000639895	STK38L	Q9Y2H1	464 aa		12.77	□□□□□ -0.36
SPIN3-231	ENST00000639895	TACC1	O75410	805 aa		12.77	□□□□□ -0.36
SPIN3-231	ENST00000639895	CAPRIN2	Q6IMN6	1127 aa	Known RBP	12.77	□□□□□ -0.36
SPIN3-231	ENST00000639895	SAMD15	Q9P1V8	674 aa		12.77	□□□□□ -0.36
SPIN3-231	ENST00000639895	ARAP3	Q8WWN8	1544 aa		12.77	□□□□□ -0.37
SPIN3-231	ENST00000639895	SMIM23	A6NLE4	172 aa		12.77	□□□□□ -0.37
SPIN3-231	ENST00000639895	C8orf74	Q6P047	294 aa		12.77	□□□□□ -0.37
SPIN3-231	ENST00000639895	TANGO6	Q9C0B7	1094 aa		12.77	□□□□□ -0.37
SPIN3-231	ENST00000639895	KAT14	Q9H8E8	782 aa		12.77	□□□□□ -0.37
SPIN3-231	ENST00000639895	POLD4	Q9HCU8	107 aa		12.77	□□□□□ -0.37
SPIN3-231	ENST00000639895	EFCAB6	Q5THR3	1501 aa		12.77	□□□□□ -0.37
SPIN3-231	ENST00000639895	VIM	P08670	466 aa	Known RBP	12.77	□□□□□ -0.37
SPIN3-231	ENST00000639895	FAM227B	Q96M60	508 aa		12.77	□□□□□ -0.37
SPIN3-231	ENST00000639895	EXOC5	O00471	708 aa		12.76	□□□□□ -0.37
SPIN3-231	ENST00000639895	CDKL5	O76039	1030 aa		12.76	□□□□□ -0.37
SPIN3-231	ENST00000639895	KRT9	P35527	623 aa		12.76	□□□□□ -0.37
SPIN3-231	ENST00000639895	LRRC23	Q53EV4	343 aa	Predicted RBP	12.76	□□□□□ -0.37
SPIN3-231	ENST00000639895	TDRD12	Q587J7	1177 aa	Known RBP	12.76	□□□□□ -0.37
SPIN3-231	ENST00000639895	HSP90AB2P	Q58FF8	381 aa		12.76	□□□□□ -0.37
SPIN3-231	ENST00000639895	C1orf141	Q5JVX7	400 aa		12.76	□□□□□ -0.37
SPIN3-231	ENST00000639895	TOGARAM2	Q6ZUX3	1019 aa		12.76	□□□□□ -0.37
SPIN3-231	ENST00000639895	G2E3	Q7L622	706 aa		12.76	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 14 ms