RNA–Protein interactions for RNA: ENST00000639888.1

SPIN3-230, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 4,299 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-230ENST00000639888 NSD2O96028 1365 aa12.53□□□□□ -0.4
SPIN3-230ENST00000639888 ZNF518AQ6AHZ1 1483 aa12.53□□□□□ -0.4
SPIN3-230ENST00000639888 FYB1O15117 783 aa12.53□□□□□ -0.4
SPIN3-230ENST00000639888 CHRM1P11229 460 aaPredicted RBP12.53□□□□□ -0.4
SPIN3-230ENST00000639888 MXRA7P84157 204 aa12.53□□□□□ -0.4
SPIN3-230ENST00000639888 KIF5AQ12840 1032 aa12.53□□□□□ -0.4
SPIN3-230ENST00000639888 CCDC6Q16204 474 aa12.53□□□□□ -0.4
SPIN3-230ENST00000639888 NCBP3Q53F19 620 aaKnown RBP12.53□□□□□ -0.4
SPIN3-230ENST00000639888 NCAPH2Q6IBW4 605 aa12.53□□□□□ -0.4
SPIN3-230ENST00000639888 AIDAQ96BJ3 306 aa12.53□□□□□ -0.4
SPIN3-230ENST00000639888 PARP3Q9Y6F1 533 aa12.53□□□□□ -0.4
SPIN3-230ENST00000639888 TLDC2A0PJX2 215 aa12.52□□□□□ -0.4
SPIN3-230ENST00000639888 GCFC2P16383 781 aaKnown RBP12.52□□□□□ -0.4
SPIN3-230ENST00000639888 CCDC129Q6ZRS4 1044 aa12.52□□□□□ -0.4
SPIN3-230ENST00000639888 ALS2CR12Q96Q35 445 aa12.52□□□□□ -0.4
SPIN3-230ENST00000639888 POLD4Q9HCU8 107 aa12.52□□□□□ -0.4
SPIN3-230ENST00000639888 PCDHA7Q9UN72 937 aa12.52□□□□□ -0.4
SPIN3-230ENST00000639888 IQGAP3Q86VI3 1631 aa12.52□□□□□ -0.4
SPIN3-230ENST00000639888 GNPTABQ3T906 1256 aa12.52□□□□□ -0.41
SPIN3-230ENST00000639888 THOC1Q96FV9 657 aaKnown RBP12.52□□□□□ -0.41
SPIN3-230ENST00000639888 ZSWIM6Q9HCJ5 1215 aa12.52□□□□□ -0.41
SPIN3-230ENST00000639888 GOLGA8KD6RF30 607 aa12.52□□□□□ -0.41
SPIN3-230ENST00000639888 TRIM21P19474 475 aaKnown RBP12.52□□□□□ -0.41
SPIN3-230ENST00000639888 GIGYF2Q6Y7W6 1299 aaKnown RBP12.52□□□□□ -0.41
SPIN3-230ENST00000639888 SELENOSQ9BQE4 189 aa12.52□□□□□ -0.41
SPIN3-230ENST00000639888 CARD10Q9BWT7 1032 aa12.52□□□□□ -0.41
SPIN3-230ENST00000639888 PTPRTO14522 1441 aa12.52□□□□□ -0.41
SPIN3-230ENST00000639888 AKR1B10O60218 316 aa12.51□□□□□ -0.41
SPIN3-230ENST00000639888 CYLC1P35663 651 aaPredicted RBP12.51□□□□□ -0.41
SPIN3-230ENST00000639888 RANBP1P43487 201 aa12.51□□□□□ -0.41
SPIN3-230ENST00000639888 MMP14P50281 582 aa12.51□□□□□ -0.41
SPIN3-230ENST00000639888 ZC3H6P61129 1189 aaKnown RBP12.51□□□□□ -0.41
SPIN3-230ENST00000639888 HAND2P61296 217 aa12.51□□□□□ -0.41
SPIN3-230ENST00000639888 PNOCQ13519 176 aa12.51□□□□□ -0.41
SPIN3-230ENST00000639888 SAMD1Q6SPF0 538 aaPredicted RBP12.51□□□□□ -0.41
SPIN3-230ENST00000639888 TOGARAM2Q6ZUX3 1019 aa12.51□□□□□ -0.41
SPIN3-230ENST00000639888 RIC3Q7Z5B4 369 aa12.51□□□□□ -0.41
SPIN3-230ENST00000639888 LMNTD2Q8IXW0 634 aa12.51□□□□□ -0.41
SPIN3-230ENST00000639888 CTAGE1Q96RT6 745 aa12.51□□□□□ -0.41
SPIN3-230ENST00000639888 VPS16Q9H269 839 aa12.51□□□□□ -0.41
SPIN3-230ENST00000639888 SUDS3Q9H7L9 328 aaPredicted RBP12.51□□□□□ -0.41
SPIN3-230ENST00000639888 KAT14Q9H8E8 782 aa12.51□□□□□ -0.41
SPIN3-230ENST00000639888 ABCC1P33527 1531 aa12.51□□□□□ -0.41
SPIN3-230ENST00000639888 EXOC5O00471 708 aa12.51□□□□□ -0.41
SPIN3-230ENST00000639888 NEFHP12036 1026 aa12.51□□□□□ -0.41
SPIN3-230ENST00000639888 KRT9P35527 623 aa12.51□□□□□ -0.41
SPIN3-230ENST00000639888 LACTBP83111 547 aaPredicted RBP12.51□□□□□ -0.41
SPIN3-230ENST00000639888 MYO1EQ12965 1108 aa12.51□□□□□ -0.41
SPIN3-230ENST00000639888 TMED8Q6PL24 325 aaPredicted RBP12.51□□□□□ -0.41
SPIN3-230ENST00000639888 CACNA2D3Q8IZS8 1091 aa12.51□□□□□ -0.41
SPIN3-230ENST00000639888 NGDNQ8NEJ9 315 aaKnown RBP12.51□□□□□ -0.41
SPIN3-230ENST00000639888 TM6SF1Q9BZW5 370 aa12.51□□□□□ -0.41
SPIN3-230ENST00000639888 STK38LQ9Y2H1 464 aa12.51□□□□□ -0.41
SPIN3-230ENST00000639888 UNC13BO14795 1591 aa12.51□□□□□ -0.41
SPIN3-230ENST00000639888 SMIM23A6NLE4 172 aa12.51□□□□□ -0.41
SPIN3-230ENST00000639888 KIF3CO14782 793 aa12.51□□□□□ -0.41
SPIN3-230ENST00000639888 TACC1O75410 805 aa12.51□□□□□ -0.41
SPIN3-230ENST00000639888 RNASE9P60153 205 aaKnown RBP12.51□□□□□ -0.41
SPIN3-230ENST00000639888 ZBTB10Q96DT7 871 aa12.51□□□□□ -0.41
SPIN3-230ENST00000639888 TANGO6Q9C0B7 1094 aa12.51□□□□□ -0.41
SPIN3-230ENST00000639888 LUC7LQ9NQ29 371 aaKnown RBP12.51□□□□□ -0.41
SPIN3-230ENST00000639888 TRPM2O94759 1503 aa12.51□□□□□ -0.41
SPIN3-230ENST00000639888 SOS1Q07889 1333 aaPredicted RBP12.51□□□□□ -0.41
SPIN3-230ENST00000639888 SOWAHDA6NJG2 315 aa12.51□□□□□ -0.41
SPIN3-230ENST00000639888 ADALQ6DHV7 355 aa12.51□□□□□ -0.41
SPIN3-230ENST00000639888 GSPT2Q8IYD1 628 aaKnown RBP12.51□□□□□ -0.41
SPIN3-230ENST00000639888 OSBPL3Q9H4L5 887 aa12.51□□□□□ -0.41
SPIN3-230ENST00000639888 UGGT1Q9NYU2 1555 aa12.5□□□□□ -0.41
SPIN3-230ENST00000639888 ERVK-7P63135 1459 aa12.5□□□□□ -0.41
SPIN3-230ENST00000639888 DDX58O95786 925 aaKnown RBP12.5□□□□□ -0.41
SPIN3-230ENST00000639888 VIMP08670 466 aaKnown RBP12.5□□□□□ -0.41
SPIN3-230ENST00000639888 GUCY2FP51841 1108 aa12.5□□□□□ -0.41
SPIN3-230ENST00000639888 MAP3K9P80192 1104 aa12.5□□□□□ -0.41
SPIN3-230ENST00000639888 HSP90AB2PQ58FF8 381 aa12.5□□□□□ -0.41
SPIN3-230ENST00000639888 C8orf74Q6P047 294 aa12.5□□□□□ -0.41
SPIN3-230ENST00000639888 LSG1Q9H089 658 aaKnown RBP12.5□□□□□ -0.41
SPIN3-230ENST00000639888 PLXNC1O60486 1568 aa12.5□□□□□ -0.41
SPIN3-230ENST00000639888 KRT83P78385 493 aa12.5□□□□□ -0.41
SPIN3-230ENST00000639888 MRPS25P82663 173 aaKnown RBP12.5□□□□□ -0.41
SPIN3-230ENST00000639888 ATL3Q6DD88 541 aa12.5□□□□□ -0.41
SPIN3-230ENST00000639888 CAPRIN2Q6IMN6 1127 aaKnown RBP12.5□□□□□ -0.41
SPIN3-230ENST00000639888 TMX4Q9H1E5 349 aaPredicted RBP12.5□□□□□ -0.41
SPIN3-230ENST00000639888 SAMD15Q9P1V8 674 aa12.5□□□□□ -0.41
SPIN3-230ENST00000639888 RPAP1Q9BWH6 1393 aaPredicted RBP12.5□□□□□ -0.41
SPIN3-230ENST00000639888 MYO1BO43795 1136 aa12.5□□□□□ -0.41
SPIN3-230ENST00000639888 CDKL5O76039 1030 aa12.5□□□□□ -0.41
SPIN3-230ENST00000639888 TDRD12Q587J7 1177 aaKnown RBP12.5□□□□□ -0.41
SPIN3-230ENST00000639888 DHX40Q8IX18 779 aaKnown RBP12.5□□□□□ -0.41
SPIN3-230ENST00000639888 TRIM22Q8IYM9 498 aa12.5□□□□□ -0.41
SPIN3-230ENST00000639888 KIF9Q9HAQ2 790 aa12.5□□□□□ -0.41
SPIN3-230ENST00000639888 PA2G4Q9UQ80 394 aaKnown RBP12.5□□□□□ -0.41
SPIN3-230ENST00000639888 TMEM232C9JQI7 657 aa12.49□□□□□ -0.41
SPIN3-230ENST00000639888 ZNF827Q17R98 1081 aa12.49□□□□□ -0.41
SPIN3-230ENST00000639888 TMTC1Q8IUR5 882 aa12.49□□□□□ -0.41
SPIN3-230ENST00000639888 REXO1L1PQ8IX06 675 aa12.49□□□□□ -0.41
SPIN3-230ENST00000639888 G3BP2Q9UN86 482 aaKnown RBP12.49□□□□□ -0.41
SPIN3-230ENST00000639888 IRAK1P51617 712 aa12.49□□□□□ -0.41
SPIN3-230ENST00000639888 SWT1Q5T5J6 900 aaKnown RBP12.49□□□□□ -0.41
SPIN3-230ENST00000639888 LUC7L2Q9Y383 392 aaKnown RBP12.49□□□□□ -0.41
SPIN3-230ENST00000639888 SSH2Q76I76 1423 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms