RNA–Protein interactions for RNA: ENST00000639561.1

ATRIP-208, Transcript of ATR interacting protein, humanhuman

TSL 2

Gene ATRIP, Length 2,376 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-208ENST00000639561 GDPD2Q9HCC8 539 aa16.42■□□□□ 0.22
ATRIP-208ENST00000639561 SCNN1DP51172 638 aa16.41■□□□□ 0.22
ATRIP-208ENST00000639561 CIAPIN1Q6FI81 312 aa16.41■□□□□ 0.22
ATRIP-208ENST00000639561 HELBQ8NG08 1087 aaPredicted RBP16.41■□□□□ 0.22
ATRIP-208ENST00000639561 SEC31BQ9NQW1 1179 aa16.41■□□□□ 0.22
ATRIP-208ENST00000639561 RBM27Q9P2N5 1060 aaKnown RBP16.41■□□□□ 0.22
ATRIP-208ENST00000639561 CXCL9Q07325 125 aa16.41■□□□□ 0.22
ATRIP-208ENST00000639561 WASHC4Q2M389 1173 aa16.41■□□□□ 0.22
ATRIP-208ENST00000639561 ZSCAN23Q3MJ62 389 aa16.41■□□□□ 0.22
ATRIP-208ENST00000639561 CDC5LQ99459 802 aaKnown RBP16.41■□□□□ 0.22
ATRIP-208ENST00000639561 CREBZFQ9NS37 354 aa16.41■□□□□ 0.22
ATRIP-208ENST00000639561 MTMR6Q9Y217 621 aa16.41■□□□□ 0.22
ATRIP-208ENST00000639561 MYO5AQ9Y4I1 1855 aaKnown RBP16.41■□□□□ 0.22
ATRIP-208ENST00000639561 PASKQ96RG2 1323 aa16.4■□□□□ 0.22
ATRIP-208ENST00000639561 C6orf229H3BNL8 230 aa16.4■□□□□ 0.22
ATRIP-208ENST00000639561 F13A1P00488 732 aa16.4■□□□□ 0.22
ATRIP-208ENST00000639561 FGFR2P21802 821 aa16.4■□□□□ 0.22
ATRIP-208ENST00000639561 GPSM2P81274 684 aa16.4■□□□□ 0.22
ATRIP-208ENST00000639561 USP50Q70EL3 339 aaPredicted RBP16.4■□□□□ 0.22
ATRIP-208ENST00000639561 ANKRD18AQ8IVF6 992 aa16.4■□□□□ 0.22
ATRIP-208ENST00000639561 ZNF512BQ96KM6 892 aaPredicted RBP16.4■□□□□ 0.22
ATRIP-208ENST00000639561 PODXL2Q9NZ53 605 aa16.4■□□□□ 0.22
ATRIP-208ENST00000639561 ARAP2Q8WZ64 1704 aa16.4■□□□□ 0.22
ATRIP-208ENST00000639561 RTL9Q8NET4 1388 aa16.4■□□□□ 0.22
ATRIP-208ENST00000639561 ZFYP08048 801 aaPredicted RBP16.4■□□□□ 0.22
ATRIP-208ENST00000639561 PHKA1P46020 1223 aa16.4■□□□□ 0.22
ATRIP-208ENST00000639561 STK3Q13188 491 aa16.4■□□□□ 0.22
ATRIP-208ENST00000639561 TTLL5Q6EMB2 1281 aa16.4■□□□□ 0.22
ATRIP-208ENST00000639561 Q6ZUG5 572 aa16.4■□□□□ 0.22
ATRIP-208ENST00000639561 JMYQ8N9B5 988 aa16.4■□□□□ 0.22
ATRIP-208ENST00000639561 LRRC2Q9BYS8 371 aa16.4■□□□□ 0.22
ATRIP-208ENST00000639561 PUS7LQ9H0K6 701 aaKnown RBP16.4■□□□□ 0.22
ATRIP-208ENST00000639561 MROH5Q6ZUA9 1318 aa16.39■□□□□ 0.21
ATRIP-208ENST00000639561 SNAP23O00161 211 aa16.39■□□□□ 0.21
ATRIP-208ENST00000639561 PUM3Q15397 648 aaKnown RBP16.39■□□□□ 0.21
ATRIP-208ENST00000639561 CCDC102BQ68D86 513 aa16.39■□□□□ 0.21
ATRIP-208ENST00000639561 GPRC5DQ9NZD1 345 aa16.39■□□□□ 0.21
ATRIP-208ENST00000639561 TMEM63CQ9P1W3 806 aa16.39■□□□□ 0.21
ATRIP-208ENST00000639561 ZNF445P59923 1031 aa16.38■□□□□ 0.21
ATRIP-208ENST00000639561 LRRFIP1Q32MZ4 808 aaKnown RBP16.38■□□□□ 0.21
ATRIP-208ENST00000639561 APPBP2Q92624 585 aa16.38■□□□□ 0.21
ATRIP-208ENST00000639561 ADARB2Q9NS39 739 aaKnown RBP16.38■□□□□ 0.21
ATRIP-208ENST00000639561 GADD45BO75293 160 aaPredicted RBP16.38■□□□□ 0.21
ATRIP-208ENST00000639561 EPS15P42566 896 aa16.38■□□□□ 0.21
ATRIP-208ENST00000639561 USP48Q86UV5 1035 aa16.38■□□□□ 0.21
ATRIP-208ENST00000639561 TBC1D16Q8TBP0 767 aa16.38■□□□□ 0.21
ATRIP-208ENST00000639561 LPIN2Q92539 896 aa16.38■□□□□ 0.21
ATRIP-208ENST00000639561 ANKIB1Q9P2G1 1089 aa16.38■□□□□ 0.21
ATRIP-208ENST00000639561 POLLQ9UGP5 575 aa16.38■□□□□ 0.21
ATRIP-208ENST00000639561 E7EWF7 191 aa16.37■□□□□ 0.21
ATRIP-208ENST00000639561 ARID4AP29374 1257 aaPredicted RBP16.37■□□□□ 0.21
ATRIP-208ENST00000639561 BRF1Q92994 677 aa16.37■□□□□ 0.21
ATRIP-208ENST00000639561 GTF3C6Q969F1 213 aa16.37■□□□□ 0.21
ATRIP-208ENST00000639561 PIH1D3Q9NQM4 214 aaKnown RBP16.37■□□□□ 0.21
ATRIP-208ENST00000639561 GGA1Q9UJY5 639 aa16.37■□□□□ 0.21
ATRIP-208ENST00000639561 CNPY2Q9Y2B0 182 aa16.37■□□□□ 0.21
ATRIP-208ENST00000639561 RAD17O75943 681 aa16.37■□□□□ 0.21
ATRIP-208ENST00000639561 ITGBL1O95965 494 aaPredicted RBP16.37■□□□□ 0.21
ATRIP-208ENST00000639561 MBD3O95983 291 aa16.37■□□□□ 0.21
ATRIP-208ENST00000639561 GMPSP49915 693 aaPredicted RBP16.37■□□□□ 0.21
ATRIP-208ENST00000639561 DHX32Q7L7V1 743 aaKnown RBP16.37■□□□□ 0.21
ATRIP-208ENST00000639561 TMEM87AQ8NBN3 555 aa16.37■□□□□ 0.21
ATRIP-208ENST00000639561 XDHP47989 1333 aa16.37■□□□□ 0.21
ATRIP-208ENST00000639561 RIMBP2O15034 1052 aa16.36■□□□□ 0.21
ATRIP-208ENST00000639561 UFL1O94874 794 aa16.36■□□□□ 0.21
ATRIP-208ENST00000639561 HMGB1P09429 215 aaKnown RBP16.36■□□□□ 0.21
ATRIP-208ENST00000639561 EXOSC10Q01780 885 aaKnown RBP16.36■□□□□ 0.21
ATRIP-208ENST00000639561 MPHOSPH8Q99549 860 aa16.36■□□□□ 0.21
ATRIP-208ENST00000639561 ZC3H12CQ9C0D7 883 aaKnown RBP16.36■□□□□ 0.21
ATRIP-208ENST00000639561 VPS37CA5D8V6 355 aaPredicted RBP16.36■□□□□ 0.21
ATRIP-208ENST00000639561 YDJCA8MPS7 323 aa16.36■□□□□ 0.21
ATRIP-208ENST00000639561 ADD2P35612 726 aa16.36■□□□□ 0.21
ATRIP-208ENST00000639561 MAP1SQ66K74 1059 aaPredicted RBP16.36■□□□□ 0.21
ATRIP-208ENST00000639561 TRPM7Q96QT4 1865 aa16.35■□□□□ 0.21
ATRIP-208ENST00000639561 PSME4Q14997 1843 aa16.35■□□□□ 0.21
ATRIP-208ENST00000639561 TMEM88BA6NKF7 163 aa16.35■□□□□ 0.21
ATRIP-208ENST00000639561 GPAA1O43292 621 aa16.35■□□□□ 0.21
ATRIP-208ENST00000639561 ECE2O60344 883 aa16.35■□□□□ 0.21
ATRIP-208ENST00000639561 LARP1BQ659C4 914 aaKnown RBP16.35■□□□□ 0.21
ATRIP-208ENST00000639561 CDC37L1Q7L3B6 337 aa16.35■□□□□ 0.21
ATRIP-208ENST00000639561 AGXT2Q9BYV1 514 aa16.35■□□□□ 0.21
ATRIP-208ENST00000639561 DBNDD1Q9H9R9 158 aa16.35■□□□□ 0.21
ATRIP-208ENST00000639561 G3V3G9 751 aa16.35■□□□□ 0.21
ATRIP-208ENST00000639561 JAK2O60674 1132 aa16.35■□□□□ 0.21
ATRIP-208ENST00000639561 FGAP02671 866 aa16.35■□□□□ 0.21
ATRIP-208ENST00000639561 SLC9C2Q5TAH2 1124 aa16.35■□□□□ 0.21
ATRIP-208ENST00000639561 DCAF8Q5TAQ9 597 aa16.35■□□□□ 0.21
ATRIP-208ENST00000639561 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.35■□□□□ 0.21
ATRIP-208ENST00000639561 ATP2B4P23634 1241 aa16.34■□□□□ 0.21
ATRIP-208ENST00000639561 HAND2P61296 217 aa16.34■□□□□ 0.21
ATRIP-208ENST00000639561 BSDC1Q9NW68 430 aaPredicted RBP16.34■□□□□ 0.21
ATRIP-208ENST00000639561 IDH1O75874 414 aaKnown RBP16.34■□□□□ 0.21
ATRIP-208ENST00000639561 UQCRFS1P1P0C7P4 283 aa16.34■□□□□ 0.21
ATRIP-208ENST00000639561 RPS12P25398 132 aaKnown RBP16.34■□□□□ 0.21
ATRIP-208ENST00000639561 IGHMBP2P38935 993 aaKnown RBP16.34■□□□□ 0.21
ATRIP-208ENST00000639561 DNM1Q05193 864 aaKnown RBP16.34■□□□□ 0.21
ATRIP-208ENST00000639561 SCRN1Q12765 414 aa16.34■□□□□ 0.21
ATRIP-208ENST00000639561 RASGRF1Q13972 1273 aa16.34■□□□□ 0.21
ATRIP-208ENST00000639561 TTF1Q15361 905 aaPredicted RBP16.34■□□□□ 0.21
ATRIP-208ENST00000639561 DPF2Q92785 391 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms