RNA–Protein interactions for RNA: ENST00000638329.1

PIGN-222, Transcript of phosphatidylinositol glycan anchor biosynthesis class N, human

TSL 5 BASIC

Gene PIGN, Length 2,367 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PIGN-222	ENST00000638329	DDX4	Q9NQI0	724 aa	Known RBP	13.14	□□□□□ -0.31
PIGN-222	ENST00000638329	SLC4A4	Q9Y6R1	1079 aa		13.14	□□□□□ -0.31
PIGN-222	ENST00000638329	FAM205A	Q6ZU69	1335 aa		13.13	□□□□□ -0.31
PIGN-222	ENST00000638329	USP17L8	P0C7I0	530 aa		13.13	□□□□□ -0.31
PIGN-222	ENST00000638329	LMNB1	P20700	586 aa		13.13	□□□□□ -0.31
PIGN-222	ENST00000638329	CRK	P46108	304 aa		13.13	□□□□□ -0.31
PIGN-222	ENST00000638329	TTF1	Q15361	905 aa	Predicted RBP	13.13	□□□□□ -0.31
PIGN-222	ENST00000638329	STRIP1	Q5VSL9	837 aa		13.13	□□□□□ -0.31
PIGN-222	ENST00000638329	CIAPIN1	Q6FI81	312 aa		13.13	□□□□□ -0.31
PIGN-222	ENST00000638329	SUPT20H	Q8NEM7	779 aa		13.13	□□□□□ -0.31
PIGN-222	ENST00000638329	LRRC2	Q9BYS8	371 aa		13.13	□□□□□ -0.31
PIGN-222	ENST00000638329	UPF3B	Q9BZI7	483 aa	Known RBP	13.13	□□□□□ -0.31
PIGN-222	ENST00000638329	RBM8A	Q9Y5S9	174 aa	Known RBP	13.13	□□□□□ -0.31
PIGN-222	ENST00000638329	CCDC171	Q6TFL3	1326 aa		13.13	□□□□□ -0.31
PIGN-222	ENST00000638329	MAGEB6P1	A0A0J9YX57	407 aa		13.13	□□□□□ -0.31
PIGN-222	ENST00000638329	PRDM1	O75626	825 aa		13.13	□□□□□ -0.31
PIGN-222	ENST00000638329	CD2BP2	O95400	341 aa	Known RBP	13.13	□□□□□ -0.31
PIGN-222	ENST00000638329	SHROOM1	Q2M3G4	852 aa	Predicted RBP	13.13	□□□□□ -0.31
PIGN-222	ENST00000638329	RSBN1L	Q6PCB5	846 aa	Predicted RBP	13.13	□□□□□ -0.31
PIGN-222	ENST00000638329	C22orf23	Q9BZE7	217 aa		13.13	□□□□□ -0.31
PIGN-222	ENST00000638329	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	13.13	□□□□□ -0.31
PIGN-222	ENST00000638329	FGA	P02671	866 aa		13.12	□□□□□ -0.31
PIGN-222	ENST00000638329	POTEI	P0CG38	1075 aa		13.12	□□□□□ -0.31
PIGN-222	ENST00000638329	POTEJ	P0CG39	1038 aa		13.12	□□□□□ -0.31
PIGN-222	ENST00000638329	APOBEC3H	Q6NTF7	200 aa	Known RBP	13.12	□□□□□ -0.31
PIGN-222	ENST00000638329	GSG1L2	A8MUP6	293 aa		13.12	□□□□□ -0.31
PIGN-222	ENST00000638329	MINDY4B	A8MYZ0	360 aa		13.12	□□□□□ -0.31
PIGN-222	ENST00000638329	FZD9	O00144	591 aa		13.12	□□□□□ -0.31
PIGN-222	ENST00000638329	VIL1	P09327	827 aa	Known RBP	13.12	□□□□□ -0.31
PIGN-222	ENST00000638329	CFAP100	Q494V2	611 aa		13.12	□□□□□ -0.31
PIGN-222	ENST00000638329	MICALL2	Q8IY33	904 aa		13.12	□□□□□ -0.31
PIGN-222	ENST00000638329	SLC44A5	Q8NCS7	719 aa		13.12	□□□□□ -0.31
PIGN-222	ENST00000638329	TRPM4	Q8TD43	1214 aa		13.12	□□□□□ -0.31
PIGN-222	ENST00000638329	KIF2C	Q99661	725 aa		13.12	□□□□□ -0.31
PIGN-222	ENST00000638329	UPF2	Q9HAU5	1272 aa	Known RBP	13.12	□□□□□ -0.31
PIGN-222	ENST00000638329	TCP10L2	B9ZVM9	353 aa		13.11	□□□□□ -0.31
PIGN-222	ENST00000638329	SEMA3E	O15041	775 aa		13.11	□□□□□ -0.31
PIGN-222	ENST00000638329	FMR1	Q06787	632 aa	Known RBP eCLIP	13.11	□□□□□ -0.31
PIGN-222	ENST00000638329	UBE3C	Q15386	1083 aa		13.11	□□□□□ -0.31
PIGN-222	ENST00000638329	SOGA3	Q5TF21	947 aa		13.11	□□□□□ -0.31
PIGN-222	ENST00000638329	CASC1	Q6TDU7	716 aa		13.11	□□□□□ -0.31
PIGN-222	ENST00000638329	STOX1	Q6ZVD7	989 aa		13.11	□□□□□ -0.31
PIGN-222	ENST00000638329	SPRYD3	Q8NCJ5	442 aa		13.11	□□□□□ -0.31
PIGN-222	ENST00000638329	DYNLL2	Q96FJ2	89 aa		13.11	□□□□□ -0.31
PIGN-222	ENST00000638329	GML	Q99445	158 aa		13.11	□□□□□ -0.31
PIGN-222	ENST00000638329	NBPF3	Q9H094	633 aa		13.11	□□□□□ -0.31
PIGN-222	ENST00000638329	CYP21A2	P08686	494 aa		13.1	□□□□□ -0.31
PIGN-222	ENST00000638329	RHBDL3	P58872	404 aa		13.1	□□□□□ -0.31
PIGN-222	ENST00000638329	CDC42EP5	Q6NZY7	148 aa		13.1	□□□□□ -0.31
PIGN-222	ENST00000638329	VEZT	Q9HBM0	779 aa		13.1	□□□□□ -0.31
PIGN-222	ENST00000638329	GPHN	Q9NQX3	736 aa	Predicted RBP	13.1	□□□□□ -0.31
PIGN-222	ENST00000638329	USP40	Q9NVE5	1235 aa		13.1	□□□□□ -0.31
PIGN-222	ENST00000638329	CNOT7	Q9UIV1	285 aa	Known RBP	13.1	□□□□□ -0.31
PIGN-222	ENST00000638329	POLR2A	P24928	1970 aa	Known RBP	13.1	□□□□□ -0.31
PIGN-222	ENST00000638329	MROH7-TTC4	A0A0A0MT08	1334 aa		13.1	□□□□□ -0.31
PIGN-222	ENST00000638329	PPFIA3	O75145	1194 aa		13.1	□□□□□ -0.31
PIGN-222	ENST00000638329	PLCD1	P51178	756 aa		13.09	□□□□□ -0.31
PIGN-222	ENST00000638329	HIRA	P54198	1017 aa	Predicted RBP	13.09	□□□□□ -0.31
PIGN-222	ENST00000638329	NFKBIB	Q15653	356 aa		13.09	□□□□□ -0.31
PIGN-222	ENST00000638329	KIAA1211	Q6ZU35	1233 aa		13.09	□□□□□ -0.31
PIGN-222	ENST00000638329	RAB11FIP4	Q86YS3	637 aa		13.09	□□□□□ -0.31
PIGN-222	ENST00000638329	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	13.09	□□□□□ -0.31
PIGN-222	ENST00000638329	EIF6	P56537	245 aa	Known RBP	13.09	□□□□□ -0.31
PIGN-222	ENST00000638329	IFNL3	Q8IZI9	196 aa		13.09	□□□□□ -0.31
PIGN-222	ENST00000638329	HELLS	Q9NRZ9	838 aa		13.09	□□□□□ -0.31
PIGN-222	ENST00000638329	SALL1	Q9NSC2	1324 aa		13.09	□□□□□ -0.31
PIGN-222	ENST00000638329	USP17L12	C9JPN9	530 aa		13.08	□□□□□ -0.32
PIGN-222	ENST00000638329	USP17L21	D6R901	530 aa		13.08	□□□□□ -0.32
PIGN-222	ENST00000638329	CREB3L3	Q68CJ9	461 aa		13.08	□□□□□ -0.32
PIGN-222	ENST00000638329	TBC1D10C	Q8IV04	446 aa		13.08	□□□□□ -0.32
PIGN-222	ENST00000638329	TEX11	Q8IYF3	940 aa		13.08	□□□□□ -0.32
PIGN-222	ENST00000638329	MAP4K1	Q92918	833 aa		13.08	□□□□□ -0.32
PIGN-222	ENST00000638329	TBC1D32	Q96NH3	1257 aa		13.08	□□□□□ -0.32
PIGN-222	ENST00000638329	RAD50	Q92878	1312 aa		13.08	□□□□□ -0.32
PIGN-222	ENST00000638329	WNT10B	O00744	389 aa		13.08	□□□□□ -0.32
PIGN-222	ENST00000638329	SLC27A2	O14975	620 aa		13.08	□□□□□ -0.32
PIGN-222	ENST00000638329	WDHD1	O75717	1129 aa	Predicted RBP	13.08	□□□□□ -0.32
PIGN-222	ENST00000638329	TDO2	P48775	406 aa		13.08	□□□□□ -0.32
PIGN-222	ENST00000638329	RRP12	Q5JTH9	1297 aa	Known RBP	13.08	□□□□□ -0.32
PIGN-222	ENST00000638329	TEKT1	Q969V4	418 aa		13.08	□□□□□ -0.32
PIGN-222	ENST00000638329	ZKSCAN3	Q9BRR0	538 aa		13.08	□□□□□ -0.32
PIGN-222	ENST00000638329	MCM9	Q9NXL9	1143 aa		13.08	□□□□□ -0.32
PIGN-222	ENST00000638329	SNX14	Q9Y5W7	946 aa		13.08	□□□□□ -0.32
PIGN-222	ENST00000638329	USP5	P45974	858 aa		13.07	□□□□□ -0.32
PIGN-222	ENST00000638329	TBC1D22A	Q8WUA7	517 aa		13.07	□□□□□ -0.32
PIGN-222	ENST00000638329	RUFY2	Q8WXA3	655 aa		13.07	□□□□□ -0.32
PIGN-222	ENST00000638329	DCP1A	Q9NPI6	582 aa	Predicted RBP	13.07	□□□□□ -0.32
PIGN-222	ENST00000638329	BRCA2	P51587	3418 aa		13.07	□□□□□ -0.32
PIGN-222	ENST00000638329	CDK5RAP2	Q96SN8	1893 aa		13.07	□□□□□ -0.32
PIGN-222	ENST00000638329	ZFY	P08048	801 aa	Predicted RBP	13.07	□□□□□ -0.32
PIGN-222	ENST00000638329	PRKG1	Q13976	671 aa		13.07	□□□□□ -0.32
PIGN-222	ENST00000638329	BECN1	Q14457	450 aa		13.07	□□□□□ -0.32
PIGN-222	ENST00000638329	NECTIN1	Q15223	517 aa		13.07	□□□□□ -0.32
PIGN-222	ENST00000638329	SPTY2D1	Q68D10	685 aa	Predicted RBP	13.07	□□□□□ -0.32
PIGN-222	ENST00000638329	CLEC10A	Q8IUN9	316 aa		13.07	□□□□□ -0.32
PIGN-222	ENST00000638329	TMEM39B	Q9GZU3	492 aa		13.07	□□□□□ -0.32
PIGN-222	ENST00000638329	MYOZ2	Q9NPC6	264 aa		13.07	□□□□□ -0.32
PIGN-222	ENST00000638329	FOXD4L1	Q9NU39	408 aa		13.07	□□□□□ -0.32
PIGN-222	ENST00000638329	LTBP3	Q9NS15	1303 aa		13.06	□□□□□ -0.32
PIGN-222	ENST00000638329	GPR75-ASB3	A0A0A6YYF3	556 aa		13.06	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms