RNA–Protein interactions for RNA: ENST00000638144.1

CLN6-225, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 576 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-225ENST00000638144 ZBTB22O15209 634 aa15.31■□□□□ 0.04
CLN6-225ENST00000638144 BTDP43251 543 aa15.31■□□□□ 0.04
CLN6-225ENST00000638144 TCP10Q12799 353 aa15.31■□□□□ 0.04
CLN6-225ENST00000638144 NFIAQ12857 509 aa15.31■□□□□ 0.04
CLN6-225ENST00000638144 NSUN4Q96CB9 384 aaKnown RBP15.31■□□□□ 0.04
CLN6-225ENST00000638144 ZIC5Q96T25 663 aa15.31■□□□□ 0.04
CLN6-225ENST00000638144 MRIQ9BWK5 157 aa15.31■□□□□ 0.04
CLN6-225ENST00000638144 ANTXR1Q9H6X2 564 aa15.31■□□□□ 0.04
CLN6-225ENST00000638144 DCTPP1Q9H773 170 aa15.31■□□□□ 0.04
CLN6-225ENST00000638144 USP40Q9NVE5 1235 aa15.31■□□□□ 0.04
CLN6-225ENST00000638144 TMOD2Q9NZR1 351 aa15.31■□□□□ 0.04
CLN6-225ENST00000638144 MROH7-TTC4A0A0A0MT08 1334 aa15.31■□□□□ 0.04
CLN6-225ENST00000638144 GAKO14976 1311 aa15.31■□□□□ 0.04
CLN6-225ENST00000638144 TNFAIP1Q13829 316 aa15.3■□□□□ 0.04
CLN6-225ENST00000638144 EDC3Q96F86 508 aaKnown RBP15.3■□□□□ 0.04
CLN6-225ENST00000638144 ZNF512BQ96KM6 892 aaPredicted RBP15.3■□□□□ 0.04
CLN6-225ENST00000638144 TEPSINQ96N21 525 aa15.3■□□□□ 0.04
CLN6-225ENST00000638144 DNAJC2Q99543 621 aaKnown RBP15.3■□□□□ 0.04
CLN6-225ENST00000638144 ANGEL1Q9UNK9 670 aaKnown RBP15.3■□□□□ 0.04
CLN6-225ENST00000638144 PPP2R3BQ9Y5P8 575 aa15.3■□□□□ 0.04
CLN6-225ENST00000638144 ZNF157P51786 506 aaPredicted RBP15.29■□□□□ 0.04
CLN6-225ENST00000638144 TSHZ3Q63HK5 1081 aa15.29■□□□□ 0.04
CLN6-225ENST00000638144 RGMBQ6NW40 437 aa15.29■□□□□ 0.04
CLN6-225ENST00000638144 ADGRA1Q86SQ6 560 aa15.29■□□□□ 0.04
CLN6-225ENST00000638144 CDK5RAP2Q96SN8 1893 aa15.29■□□□□ 0.04
CLN6-225ENST00000638144 IDH1O75874 414 aaKnown RBP15.28■□□□□ 0.04
CLN6-225ENST00000638144 HSPA1AP0DMV8 641 aaKnown RBP15.28■□□□□ 0.04
CLN6-225ENST00000638144 HSPA1BP0DMV9 641 aaKnown RBP15.28■□□□□ 0.04
CLN6-225ENST00000638144 ECE1P42892 770 aa15.28■□□□□ 0.04
CLN6-225ENST00000638144 TNNI2P48788 182 aa15.28■□□□□ 0.04
CLN6-225ENST00000638144 MKRN3Q13064 507 aaKnown RBP15.28■□□□□ 0.04
CLN6-225ENST00000638144 PICALMQ13492 652 aa15.28■□□□□ 0.04
CLN6-225ENST00000638144 NAA16Q6N069 864 aaPredicted RBP15.28■□□□□ 0.04
CLN6-225ENST00000638144 ZFPM1Q8IX07 1006 aa15.28■□□□□ 0.04
CLN6-225ENST00000638144 FAM198AQ9UFP1 575 aa15.28■□□□□ 0.04
CLN6-225ENST00000638144 RFX7Q2KHR2 1363 aa15.27■□□□□ 0.04
CLN6-225ENST00000638144 FAM155AB1AL88 458 aaPredicted RBP15.27■□□□□ 0.04
CLN6-225ENST00000638144 GOLIM4O00461 696 aa15.27■□□□□ 0.04
CLN6-225ENST00000638144 RGS3P49796 1198 aa15.27■□□□□ 0.04
CLN6-225ENST00000638144 FKBP1BP68106 108 aa15.27■□□□□ 0.04
CLN6-225ENST00000638144 ARMC9Q7Z3E5 817 aa15.27■□□□□ 0.04
CLN6-225ENST00000638144 RASAL3Q86YV0 1011 aa15.27■□□□□ 0.04
CLN6-225ENST00000638144 SLF2Q8IX21 1173 aa15.27■□□□□ 0.04
CLN6-225ENST00000638144 OTUD7AQ8TE49 926 aaPredicted RBP15.27■□□□□ 0.04
CLN6-225ENST00000638144 HHIPL1Q96JK4 782 aa15.27■□□□□ 0.04
CLN6-225ENST00000638144 CLMNQ96JQ2 1002 aa15.27■□□□□ 0.04
CLN6-225ENST00000638144 BOLA2Q9H3K6 86 aa15.27■□□□□ 0.04
CLN6-225ENST00000638144 DDX4Q9NQI0 724 aaKnown RBP15.27■□□□□ 0.04
CLN6-225ENST00000638144 GPR75-ASB3A0A0A6YYF3 556 aa15.26■□□□□ 0.03
CLN6-225ENST00000638144 RHBDL3P58872 404 aa15.26■□□□□ 0.03
CLN6-225ENST00000638144 GSTO1P78417 241 aa15.26■□□□□ 0.03
CLN6-225ENST00000638144 SUPT20HL1Q3ZLR7 823 aa15.26■□□□□ 0.03
CLN6-225ENST00000638144 FAM163AQ96GL9 167 aaPredicted RBP15.26■□□□□ 0.03
CLN6-225ENST00000638144 AATFQ9NY61 560 aaKnown RBP eCLIP15.26■□□□□ 0.03
CLN6-225ENST00000638144 PPP1R12BO60237 982 aaPredicted RBP15.25■□□□□ 0.03
CLN6-225ENST00000638144 USP2O75604 605 aaPredicted RBP15.25■□□□□ 0.03
CLN6-225ENST00000638144 WDHD1O75717 1129 aaPredicted RBP15.25■□□□□ 0.03
CLN6-225ENST00000638144 LDHCP07864 332 aa15.25■□□□□ 0.03
CLN6-225ENST00000638144 SLC10A3P09131 477 aa15.25■□□□□ 0.03
CLN6-225ENST00000638144 SLURP2P0DP57 97 aa15.25■□□□□ 0.03
CLN6-225ENST00000638144 CYP7A1P22680 504 aa15.25■□□□□ 0.03
CLN6-225ENST00000638144 MIGA2Q7L4E1 593 aa15.25■□□□□ 0.03
CLN6-225ENST00000638144 FAM83AQ86UY5 434 aa15.25■□□□□ 0.03
CLN6-225ENST00000638144 MAGEB6Q8N7X4 407 aa15.25■□□□□ 0.03
CLN6-225ENST00000638144 MIGA1Q8NAN2 632 aa15.25■□□□□ 0.03
CLN6-225ENST00000638144 SH3RF3Q8TEJ3 882 aaPredicted RBP15.25■□□□□ 0.03
CLN6-225ENST00000638144 MYH7P12883 1935 aa15.25■□□□□ 0.03
CLN6-225ENST00000638144 RPAP1Q9BWH6 1393 aaPredicted RBP15.24■□□□□ 0.03
CLN6-225ENST00000638144 DYNLL1P63167 89 aaKnown RBP15.24■□□□□ 0.03
CLN6-225ENST00000638144 SLFNL1Q499Z3 407 aa15.24■□□□□ 0.03
CLN6-225ENST00000638144 FKBP1CQ5VVH2 108 aa15.24■□□□□ 0.03
CLN6-225ENST00000638144 FAM151AQ8WW52 585 aa15.24■□□□□ 0.03
CLN6-225ENST00000638144 FOCADQ5VW36 1801 aa15.24■□□□□ 0.03
CLN6-225ENST00000638144 FOXN1O15353 648 aa15.23■□□□□ 0.03
CLN6-225ENST00000638144 CHGBP05060 677 aa15.23■□□□□ 0.03
CLN6-225ENST00000638144 ATP5JP18859 108 aa15.23■□□□□ 0.03
CLN6-225ENST00000638144 IREB2P48200 963 aaKnown RBP15.23■□□□□ 0.03
CLN6-225ENST00000638144 KIF23Q02241 960 aaPredicted RBP15.23■□□□□ 0.03
CLN6-225ENST00000638144 NOGQ13253 232 aa15.23■□□□□ 0.03
CLN6-225ENST00000638144 HDAC1Q13547 482 aaPredicted RBP15.23■□□□□ 0.03
CLN6-225ENST00000638144 LDLRAD1Q5T700 205 aa15.23■□□□□ 0.03
CLN6-225ENST00000638144 ANKRD45Q5TZF3 282 aa15.23■□□□□ 0.03
CLN6-225ENST00000638144 SH3BP5LQ7L8J4 393 aa15.23■□□□□ 0.03
CLN6-225ENST00000638144 TEX11Q8IYF3 940 aa15.23■□□□□ 0.03
CLN6-225ENST00000638144 CCDC102AQ96A19 550 aa15.23■□□□□ 0.03
CLN6-225ENST00000638144 NOL10Q9BSC4 688 aaKnown RBP15.23■□□□□ 0.03
CLN6-225ENST00000638144 IDI2Q9BXS1 227 aa15.23■□□□□ 0.03
CLN6-225ENST00000638144 PAG1Q9NWQ8 432 aa15.23■□□□□ 0.03
CLN6-225ENST00000638144 TSKSQ9UJT2 592 aa15.23■□□□□ 0.03
CLN6-225ENST00000638144 DDTLA6NHG4 134 aaPredicted RBP15.22■□□□□ 0.03
CLN6-225ENST00000638144 MAP4K4O95819 1239 aaPredicted RBP15.22■□□□□ 0.03
CLN6-225ENST00000638144 IGHDP01880 384 aa15.22■□□□□ 0.03
CLN6-225ENST00000638144 PDE6AP16499 860 aa15.22■□□□□ 0.03
CLN6-225ENST00000638144 MAP3K12Q12852 859 aa15.22■□□□□ 0.03
CLN6-225ENST00000638144 MAP3K11Q16584 847 aa15.22■□□□□ 0.03
CLN6-225ENST00000638144 SLC4A8Q2Y0W8 1093 aa15.22■□□□□ 0.03
CLN6-225ENST00000638144 ZSCAN29Q8IWY8 852 aaPredicted RBP15.22■□□□□ 0.03
CLN6-225ENST00000638144 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.22■□□□□ 0.03
CLN6-225ENST00000638144 CNKSR2Q8WXI2 1034 aa15.22■□□□□ 0.03
CLN6-225ENST00000638144 ELP3Q9H9T3 547 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms