RNA–Protein interactions for RNA: ENST00000637903.1

SPTAN1-238, Transcript of spectrin alpha, non-erythrocytic 1, human

TSL 5

Gene SPTAN1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPTAN1-238	ENST00000637903	CHAF1A	Q13111	956 aa	Predicted RBP	10.34	□□□□□ -0.75
SPTAN1-238	ENST00000637903	HOOK2	Q96ED9	719 aa		10.34	□□□□□ -0.75
SPTAN1-238	ENST00000637903	OTUD5	Q96G74	571 aa		10.34	□□□□□ -0.75
SPTAN1-238	ENST00000637903	API5	Q9BZZ5	524 aa	Known RBP	10.34	□□□□□ -0.75
SPTAN1-238	ENST00000637903	MAST3	O60307	1309 aa		10.33	□□□□□ -0.76
SPTAN1-238	ENST00000637903	TLR2	O60603	784 aa		10.33	□□□□□ -0.76
SPTAN1-238	ENST00000637903	IFIT1	P09914	478 aa	Known RBP	10.33	□□□□□ -0.76
SPTAN1-238	ENST00000637903	CETP	P11597	493 aa		10.33	□□□□□ -0.76
SPTAN1-238	ENST00000637903	TRIM27	P14373	513 aa		10.33	□□□□□ -0.76
SPTAN1-238	ENST00000637903	RFX5	P48382	616 aa	Predicted RBP	10.33	□□□□□ -0.76
SPTAN1-238	ENST00000637903	PPIL2	Q13356	520 aa		10.33	□□□□□ -0.76
SPTAN1-238	ENST00000637903	PUM3	Q15397	648 aa	Known RBP	10.33	□□□□□ -0.76
SPTAN1-238	ENST00000637903	ATF7IP	Q6VMQ6	1270 aa		10.33	□□□□□ -0.76
SPTAN1-238	ENST00000637903	NBPF11	Q86T75	865 aa		10.33	□□□□□ -0.76
SPTAN1-238	ENST00000637903	KLHDC4	Q8TBB5	520 aa		10.33	□□□□□ -0.76
SPTAN1-238	ENST00000637903	WRNIP1	Q96S55	665 aa		10.33	□□□□□ -0.76
SPTAN1-238	ENST00000637903	TMOD2	Q9NZR1	351 aa		10.33	□□□□□ -0.76
SPTAN1-238	ENST00000637903	RPAP1	Q9BWH6	1393 aa	Predicted RBP	10.33	□□□□□ -0.76
SPTAN1-238	ENST00000637903	BTBD19	C9JJ37	291 aa		10.32	□□□□□ -0.76
SPTAN1-238	ENST00000637903	EYA2	O00167	538 aa		10.32	□□□□□ -0.76
SPTAN1-238	ENST00000637903	IRF6	O14896	467 aa		10.32	□□□□□ -0.76
SPTAN1-238	ENST00000637903	WDHD1	O75717	1129 aa	Predicted RBP	10.32	□□□□□ -0.76
SPTAN1-238	ENST00000637903	GNRH1	P01148	92 aa		10.32	□□□□□ -0.76
SPTAN1-238	ENST00000637903	PPAT	Q06203	517 aa		10.32	□□□□□ -0.76
SPTAN1-238	ENST00000637903	SNAPC2	Q13487	334 aa		10.32	□□□□□ -0.76
SPTAN1-238	ENST00000637903	HABP4	Q5JVS0	413 aa	Known RBP	10.32	□□□□□ -0.76
SPTAN1-238	ENST00000637903	DCAF15	Q66K64	600 aa		10.32	□□□□□ -0.76
SPTAN1-238	ENST00000637903	WDR66	Q8TBY9	1149 aa		10.32	□□□□□ -0.76
SPTAN1-238	ENST00000637903	LPIN2	Q92539	896 aa		10.32	□□□□□ -0.76
SPTAN1-238	ENST00000637903	ZKSCAN4	Q969J2	545 aa	Predicted RBP	10.32	□□□□□ -0.76
SPTAN1-238	ENST00000637903	TMEM106C	Q9BVX2	250 aa		10.32	□□□□□ -0.76
SPTAN1-238	ENST00000637903	ZNF112	Q9UJU3	913 aa		10.32	□□□□□ -0.76
SPTAN1-238	ENST00000637903	PTCH2	Q9Y6C5	1203 aa		10.32	□□□□□ -0.76
SPTAN1-238	ENST00000637903	CEP290	O15078	2479 aa		10.31	□□□□□ -0.76
SPTAN1-238	ENST00000637903	MYH13	Q9UKX3	1938 aa		10.31	□□□□□ -0.76
SPTAN1-238	ENST00000637903	ZBTB22	O15209	634 aa		10.31	□□□□□ -0.76
SPTAN1-238	ENST00000637903	MS4A1	P11836	297 aa		10.31	□□□□□ -0.76
SPTAN1-238	ENST00000637903	LACTB	P83111	547 aa	Predicted RBP	10.31	□□□□□ -0.76
SPTAN1-238	ENST00000637903	SLC9C1	Q4G0N8	1177 aa		10.31	□□□□□ -0.76
SPTAN1-238	ENST00000637903	C17orf99	Q6UX52	265 aa		10.31	□□□□□ -0.76
SPTAN1-238	ENST00000637903	ATG9A	Q7Z3C6	839 aa		10.31	□□□□□ -0.76
SPTAN1-238	ENST00000637903	FTSJ3	Q8IY81	847 aa	Known RBP	10.31	□□□□□ -0.76
SPTAN1-238	ENST00000637903	FAM151A	Q8WW52	585 aa		10.31	□□□□□ -0.76
SPTAN1-238	ENST00000637903	CLUAP1	Q96AJ1	413 aa		10.31	□□□□□ -0.76
SPTAN1-238	ENST00000637903	ZNF341	Q9BYN7	854 aa		10.31	□□□□□ -0.76
SPTAN1-238	ENST00000637903	FBXO3	Q9UK99	471 aa		10.31	□□□□□ -0.76
SPTAN1-238	ENST00000637903	TNN	Q9UQP3	1299 aa		10.31	□□□□□ -0.76
SPTAN1-238	ENST00000637903	SLC5A1	P13866	664 aa		10.3	□□□□□ -0.76
SPTAN1-238	ENST00000637903	INPP5B	P32019	993 aa		10.3	□□□□□ -0.76
SPTAN1-238	ENST00000637903	PRMT2	P55345	433 aa		10.3	□□□□□ -0.76
SPTAN1-238	ENST00000637903	KIF22	Q14807	665 aa		10.3	□□□□□ -0.76
SPTAN1-238	ENST00000637903	MIGA2	Q7L4E1	593 aa		10.3	□□□□□ -0.76
SPTAN1-238	ENST00000637903	ANKRD23	Q86SG2	305 aa		10.3	□□□□□ -0.76
SPTAN1-238	ENST00000637903	ARHGAP39	Q9C0H5	1083 aa		10.3	□□□□□ -0.76
SPTAN1-238	ENST00000637903	KCNH4	Q9UQ05	1017 aa		10.3	□□□□□ -0.76
SPTAN1-238	ENST00000637903	DAGLA	Q9Y4D2	1042 aa		10.3	□□□□□ -0.76
SPTAN1-238	ENST00000637903	AK9	Q5TCS8	1911 aa		10.3	□□□□□ -0.76
SPTAN1-238	ENST00000637903	ZSWIM8	A7E2V4	1837 aa		10.3	□□□□□ -0.76
SPTAN1-238	ENST00000637903	CIAO1	O76071	339 aa		10.29	□□□□□ -0.76
SPTAN1-238	ENST00000637903	MOGS	Q13724	837 aa		10.29	□□□□□ -0.76
SPTAN1-238	ENST00000637903	PDE3A	Q14432	1141 aa		10.29	□□□□□ -0.76
SPTAN1-238	ENST00000637903	NOL9	Q5SY16	702 aa	Known RBP	10.29	□□□□□ -0.76
SPTAN1-238	ENST00000637903	C20orf194	Q5TEA3	1177 aa		10.29	□□□□□ -0.76
SPTAN1-238	ENST00000637903	CDC42EP5	Q6NZY7	148 aa		10.29	□□□□□ -0.76
SPTAN1-238	ENST00000637903	PANK1	Q8TE04	598 aa		10.29	□□□□□ -0.76
SPTAN1-238	ENST00000637903	ADGRA2	Q96PE1	1338 aa		10.29	□□□□□ -0.76
SPTAN1-238	ENST00000637903	SALL1	Q9NSC2	1324 aa		10.29	□□□□□ -0.76
SPTAN1-238	ENST00000637903	RLBP1	P12271	317 aa		10.28	□□□□□ -0.76
SPTAN1-238	ENST00000637903	CTGF	P29279	349 aa		10.28	□□□□□ -0.76
SPTAN1-238	ENST00000637903	PRDX5	P30044	214 aa		10.28	□□□□□ -0.76
SPTAN1-238	ENST00000637903	NFIA	Q12857	509 aa		10.28	□□□□□ -0.76
SPTAN1-238	ENST00000637903	SLC4A8	Q2Y0W8	1093 aa		10.28	□□□□□ -0.76
SPTAN1-238	ENST00000637903	TMEM57	Q8N5G2	664 aa		10.28	□□□□□ -0.76
SPTAN1-238	ENST00000637903	SH3TC2	Q8TF17	1288 aa		10.28	□□□□□ -0.76
SPTAN1-238	ENST00000637903	FAM198A	Q9UFP1	575 aa		10.28	□□□□□ -0.76
SPTAN1-238	ENST00000637903	MYH2	Q9UKX2	1941 aa		10.27	□□□□□ -0.76
SPTAN1-238	ENST00000637903	PDHX	O00330	501 aa		10.27	□□□□□ -0.77
SPTAN1-238	ENST00000637903	CXCL11	O14625	94 aa		10.27	□□□□□ -0.77
SPTAN1-238	ENST00000637903	SEMA3E	O15041	775 aa		10.27	□□□□□ -0.77
SPTAN1-238	ENST00000637903	LDHB	P07195	334 aa	Known RBP	10.27	□□□□□ -0.77
SPTAN1-238	ENST00000637903	MAP3K10	Q02779	954 aa		10.27	□□□□□ -0.77
SPTAN1-238	ENST00000637903	TCP10	Q12799	353 aa		10.27	□□□□□ -0.77
SPTAN1-238	ENST00000637903	DIXDC1	Q155Q3	683 aa		10.27	□□□□□ -0.77
SPTAN1-238	ENST00000637903	ATP2B3	Q16720	1220 aa		10.27	□□□□□ -0.77
SPTAN1-238	ENST00000637903	ITPRIP	Q8IWB1	547 aa		10.27	□□□□□ -0.77
SPTAN1-238	ENST00000637903	TRIM47	Q96LD4	638 aa		10.27	□□□□□ -0.77
SPTAN1-238	ENST00000637903	USP40	Q9NVE5	1235 aa		10.27	□□□□□ -0.77
SPTAN1-238	ENST00000637903	GNL3L	Q9NVN8	582 aa	Known RBP	10.27	□□□□□ -0.77
SPTAN1-238	ENST00000637903	CEP126	Q9P2H0	1117 aa		10.27	□□□□□ -0.77
SPTAN1-238	ENST00000637903	SRRD	Q9UH36	339 aa		10.27	□□□□□ -0.77
SPTAN1-238	ENST00000637903	CPA4	Q9UI42	421 aa		10.27	□□□□□ -0.77
SPTAN1-238	ENST00000637903	DENND2A	Q9ULE3	1009 aa		10.27	□□□□□ -0.77
SPTAN1-238	ENST00000637903	ATRNL1	Q5VV63	1379 aa		10.26	□□□□□ -0.77
SPTAN1-238	ENST00000637903	PHF20L1	A8MW92	1017 aa		10.26	□□□□□ -0.77
SPTAN1-238	ENST00000637903	UBTFL1	P0CB47	393 aa	Predicted RBP	10.26	□□□□□ -0.77
SPTAN1-238	ENST00000637903	HOXD10	P28358	340 aa		10.26	□□□□□ -0.77
SPTAN1-238	ENST00000637903	IL15	P40933	162 aa	Predicted RBP	10.26	□□□□□ -0.77
SPTAN1-238	ENST00000637903	PSMC4	P43686	418 aa		10.26	□□□□□ -0.77
SPTAN1-238	ENST00000637903	FXR1	P51114	621 aa	Known RBP eCLIP	10.26	□□□□□ -0.77
SPTAN1-238	ENST00000637903	MVP	Q14764	893 aa	Known RBP	10.26	□□□□□ -0.77

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