RNA–Protein interactions for RNA: ENST00000636603.1

CHRNA7-217, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5 BASIC

Gene CHRNA7, Length 2,012 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-217ENST00000636603 UPF3BQ9BZI7 483 aaKnown RBP18.26■□□□□ 0.51
CHRNA7-217ENST00000636603 CCDC88AQ3V6T2 1871 aa18.26■□□□□ 0.51
CHRNA7-217ENST00000636603 F8W031 263 aaPredicted RBP18.25■□□□□ 0.51
CHRNA7-217ENST00000636603 ZBTB22O15209 634 aa18.25■□□□□ 0.51
CHRNA7-217ENST00000636603 INTS4Q96HW7 963 aaKnown RBP18.25■□□□□ 0.51
CHRNA7-217ENST00000636603 FHDC1Q9C0D6 1143 aaPredicted RBP18.25■□□□□ 0.51
CHRNA7-217ENST00000636603 FAM205AQ6ZU69 1335 aa18.25■□□□□ 0.51
CHRNA7-217ENST00000636603 APPP05067 770 aa18.25■□□□□ 0.51
CHRNA7-217ENST00000636603 CPA1P15085 419 aa18.25■□□□□ 0.51
CHRNA7-217ENST00000636603 SPTY2D1Q68D10 685 aaPredicted RBP18.25■□□□□ 0.51
CHRNA7-217ENST00000636603 MAGEB6P1A0A0J9YX57 407 aa18.24■□□□□ 0.51
CHRNA7-217ENST00000636603 FGAP02671 866 aa18.24■□□□□ 0.51
CHRNA7-217ENST00000636603 CYP21A2P08686 494 aa18.24■□□□□ 0.51
CHRNA7-217ENST00000636603 PSMD1Q99460 953 aa18.24■□□□□ 0.51
CHRNA7-217ENST00000636603 AATFQ9NY61 560 aaKnown RBP eCLIP18.24■□□□□ 0.51
CHRNA7-217ENST00000636603 U3KPZ7 1027 aaPredicted RBP18.24■□□□□ 0.51
CHRNA7-217ENST00000636603 YDJCA8MPS7 323 aa18.23■□□□□ 0.51
CHRNA7-217ENST00000636603 FOXD4L5Q5VV16 416 aaPredicted RBP18.23■□□□□ 0.51
CHRNA7-217ENST00000636603 NOL8Q76FK4 1167 aaKnown RBP18.23■□□□□ 0.51
CHRNA7-217ENST00000636603 PODNQ7Z5L7 613 aa18.23■□□□□ 0.51
CHRNA7-217ENST00000636603 SUPT20HQ8NEM7 779 aa18.23■□□□□ 0.51
CHRNA7-217ENST00000636603 FOXD4L4Q8WXT5 416 aaPredicted RBP18.23■□□□□ 0.51
CHRNA7-217ENST00000636603 PPP1R9BQ96SB3 815 aa18.23■□□□□ 0.51
CHRNA7-217ENST00000636603 RIOK1Q9BRS2 568 aaKnown RBP18.23■□□□□ 0.51
CHRNA7-217ENST00000636603 RBM27Q9P2N5 1060 aaKnown RBP18.23■□□□□ 0.51
CHRNA7-217ENST00000636603 COL4A5P29400 1685 aa18.23■□□□□ 0.51
CHRNA7-217ENST00000636603 HAND2P61296 217 aa18.23■□□□□ 0.51
CHRNA7-217ENST00000636603 SDR42E1Q8WUS8 393 aa18.23■□□□□ 0.51
CHRNA7-217ENST00000636603 KCNB2Q92953 911 aa18.23■□□□□ 0.51
CHRNA7-217ENST00000636603 SLC4A4Q9Y6R1 1079 aa18.23■□□□□ 0.51
CHRNA7-217ENST00000636603 MYH2Q9UKX2 1941 aa18.22■□□□□ 0.51
CHRNA7-217ENST00000636603 LARGE2Q8N3Y3 721 aa18.22■□□□□ 0.51
CHRNA7-217ENST00000636603 EPB41L4AQ9HCS5 686 aaPredicted RBP18.22■□□□□ 0.51
CHRNA7-217ENST00000636603 GSG1L2A8MUP6 293 aa18.22■□□□□ 0.51
CHRNA7-217ENST00000636603 NASPP49321 788 aaPredicted RBP18.22■□□□□ 0.51
CHRNA7-217ENST00000636603 TBC1D22AQ8WUA7 517 aa18.22■□□□□ 0.51
CHRNA7-217ENST00000636603 JAKMIP1Q96N16 626 aaKnown RBP18.22■□□□□ 0.51
CHRNA7-217ENST00000636603 TTC14Q96N46 770 aa18.22■□□□□ 0.51
CHRNA7-217ENST00000636603 TMEM63CQ9P1W3 806 aa18.22■□□□□ 0.51
CHRNA7-217ENST00000636603 NFKBIEO00221 500 aa18.21■□□□□ 0.51
CHRNA7-217ENST00000636603 ZKSCAN1P17029 563 aaPredicted RBP18.21■□□□□ 0.51
CHRNA7-217ENST00000636603 NCLP19338 710 aaKnown RBP18.21■□□□□ 0.51
CHRNA7-217ENST00000636603 ESPNB1AK53 854 aa18.2■□□□□ 0.5
CHRNA7-217ENST00000636603 PATL2C9JE40 543 aaKnown RBP18.2■□□□□ 0.5
CHRNA7-217ENST00000636603 CASTP20810 708 aaKnown RBP18.2■□□□□ 0.5
CHRNA7-217ENST00000636603 SCNN1DP51172 638 aa18.2■□□□□ 0.5
CHRNA7-217ENST00000636603 RASSF7Q02833 373 aa18.2■□□□□ 0.5
CHRNA7-217ENST00000636603 GRIPAP1Q4V328 841 aa18.2■□□□□ 0.5
CHRNA7-217ENST00000636603 SOGA3Q5TF21 947 aa18.2■□□□□ 0.5
CHRNA7-217ENST00000636603 STOX1Q6ZVD7 989 aa18.2■□□□□ 0.5
CHRNA7-217ENST00000636603 RBSNQ9H1K0 784 aa18.2■□□□□ 0.5
CHRNA7-217ENST00000636603 FER1L6Q2WGJ9 1857 aa18.2■□□□□ 0.5
CHRNA7-217ENST00000636603 MAST2Q6P0Q8 1798 aa18.2■□□□□ 0.5
CHRNA7-217ENST00000636603 RNF20Q5VTR2 975 aa18.2■□□□□ 0.5
CHRNA7-217ENST00000636603 IFNL3Q8IZI9 196 aa18.2■□□□□ 0.5
CHRNA7-217ENST00000636603 TAOK3Q9H2K8 898 aa18.2■□□□□ 0.5
CHRNA7-217ENST00000636603 USP17L3A6NCW0 530 aa18.19■□□□□ 0.5
CHRNA7-217ENST00000636603 USP17L4A6NCW7 530 aa18.19■□□□□ 0.5
CHRNA7-217ENST00000636603 RAD17O75943 681 aa18.19■□□□□ 0.5
CHRNA7-217ENST00000636603 DACT2Q5SW24 774 aa18.19■□□□□ 0.5
CHRNA7-217ENST00000636603 USP17L1Q7RTZ2 530 aa18.19■□□□□ 0.5
CHRNA7-217ENST00000636603 TCEANC2Q96MN5 208 aa18.19■□□□□ 0.5
CHRNA7-217ENST00000636603 TTF2Q9UNY4 1162 aaKnown RBP18.19■□□□□ 0.5
CHRNA7-217ENST00000636603 SMIM22K7EJ46 135 aa18.18■□□□□ 0.5
CHRNA7-217ENST00000636603 IARSP41252 1262 aaKnown RBP18.18■□□□□ 0.5
CHRNA7-217ENST00000636603 KIAA0825Q8IV33 1275 aa18.18■□□□□ 0.5
CHRNA7-217ENST00000636603 LARP6Q9BRS8 491 aaKnown RBP18.18■□□□□ 0.5
CHRNA7-217ENST00000636603 RPAP1Q9BWH6 1393 aaPredicted RBP18.18■□□□□ 0.5
CHRNA7-217ENST00000636603 BAZ2AQ9UIF9 1905 aaKnown RBP18.18■□□□□ 0.5
CHRNA7-217ENST00000636603 PRELPP51888 382 aa18.18■□□□□ 0.5
CHRNA7-217ENST00000636603 CCDC173Q0VFZ6 552 aa18.18■□□□□ 0.5
CHRNA7-217ENST00000636603 STRIP1Q5VSL9 837 aa18.18■□□□□ 0.5
CHRNA7-217ENST00000636603 SH3RF3Q8TEJ3 882 aaPredicted RBP18.18■□□□□ 0.5
CHRNA7-217ENST00000636603 SYT17Q9BSW7 474 aa18.18■□□□□ 0.5
CHRNA7-217ENST00000636603 MROH7-TTC4A0A0A0MT08 1334 aa18.18■□□□□ 0.5
CHRNA7-217ENST00000636603 ZNF646O15015 1829 aaPredicted RBP18.17■□□□□ 0.5
CHRNA7-217ENST00000636603 STK11IPQ8N1F8 1099 aa18.17■□□□□ 0.5
CHRNA7-217ENST00000636603 NBPF3Q9H094 633 aa18.17■□□□□ 0.5
CHRNA7-217ENST00000636603 NAPBQ9H115 298 aa18.17■□□□□ 0.5
CHRNA7-217ENST00000636603 INCENPQ9NQS7 918 aa18.17■□□□□ 0.5
CHRNA7-217ENST00000636603 PCDHAC2Q9Y5I4 1007 aa18.17■□□□□ 0.5
CHRNA7-217ENST00000636603 ADAMTSL1Q8N6G6 1762 aa18.17■□□□□ 0.5
CHRNA7-217ENST00000636603 BTDP43251 543 aa18.16■□□□□ 0.5
CHRNA7-217ENST00000636603 TDO2P48775 406 aa18.16■□□□□ 0.5
CHRNA7-217ENST00000636603 GSTO1P78417 241 aa18.16■□□□□ 0.5
CHRNA7-217ENST00000636603 EVX2Q03828 476 aa18.16■□□□□ 0.5
CHRNA7-217ENST00000636603 CTNNA3Q9UI47 895 aa18.16■□□□□ 0.5
CHRNA7-217ENST00000636603 E7EWF7 191 aa18.16■□□□□ 0.5
CHRNA7-217ENST00000636603 GNAT2P19087 354 aa18.16■□□□□ 0.5
CHRNA7-217ENST00000636603 IMMTQ16891 758 aaKnown RBP18.16■□□□□ 0.5
CHRNA7-217ENST00000636603 SLC4A8Q2Y0W8 1093 aa18.16■□□□□ 0.5
CHRNA7-217ENST00000636603 TSGA10IPQ3SY00 556 aa18.16■□□□□ 0.5
CHRNA7-217ENST00000636603 RUFY3Q7L099 469 aa18.16■□□□□ 0.5
CHRNA7-217ENST00000636603 NKX2-3Q8TAU0 364 aa18.16■□□□□ 0.5
CHRNA7-217ENST00000636603 ZSWIM6Q9HCJ5 1215 aa18.16■□□□□ 0.5
CHRNA7-217ENST00000636603 CYP2D7A0A087X1C5 515 aa18.15■□□□□ 0.5
CHRNA7-217ENST00000636603 PSMD14O00487 310 aa18.15■□□□□ 0.5
CHRNA7-217ENST00000636603 ZNF213O14771 459 aa18.15■□□□□ 0.5
CHRNA7-217ENST00000636603 LDHCP07864 332 aa18.15■□□□□ 0.5
CHRNA7-217ENST00000636603 CTDSPL2Q05D32 466 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms