RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 ATXN8OSP0DMR3 200 aa6.69□□□□□ -1.34
SCN1A-212ENST00000636194 NPR1P16066 1061 aa6.69□□□□□ -1.34
SCN1A-212ENST00000636194 PSMA4P25789 261 aaKnown RBP6.69□□□□□ -1.34
SCN1A-212ENST00000636194 CLNS1AP54105 237 aaKnown RBP6.69□□□□□ -1.34
SCN1A-212ENST00000636194 PPP6R3Q5H9R7 873 aaPredicted RBP6.69□□□□□ -1.34
SCN1A-212ENST00000636194 CASC4Q6P4E1 433 aa6.69□□□□□ -1.34
SCN1A-212ENST00000636194 CDC37L1Q7L3B6 337 aa6.69□□□□□ -1.34
SCN1A-212ENST00000636194 PROSER2Q86WR7 435 aaPredicted RBP6.69□□□□□ -1.34
SCN1A-212ENST00000636194 DDX42Q86XP3 938 aaKnown RBP eCLIP6.69□□□□□ -1.34
SCN1A-212ENST00000636194 LIMCH1Q9UPQ0 1083 aa6.69□□□□□ -1.34
SCN1A-212ENST00000636194 POLR2BP30876 1174 aaKnown RBP6.69□□□□□ -1.34
SCN1A-212ENST00000636194 YWHAEP62258 255 aaKnown RBP6.69□□□□□ -1.34
SCN1A-212ENST00000636194 NMIQ13287 307 aaPredicted RBP6.69□□□□□ -1.34
SCN1A-212ENST00000636194 NFE2L2Q16236 605 aa6.69□□□□□ -1.34
SCN1A-212ENST00000636194 VWA3BQ502W6 1294 aa6.69□□□□□ -1.34
SCN1A-212ENST00000636194 TMTC1Q8IUR5 882 aa6.69□□□□□ -1.34
SCN1A-212ENST00000636194 PICK1Q9NRD5 415 aa6.69□□□□□ -1.34
SCN1A-212ENST00000636194 IVNS1ABPQ9Y6Y0 642 aa6.69□□□□□ -1.34
SCN1A-212ENST00000636194 XPAP23025 273 aaPredicted RBP6.69□□□□□ -1.34
SCN1A-212ENST00000636194 GJC1P36383 396 aa6.69□□□□□ -1.34
SCN1A-212ENST00000636194 CCDC93Q567U6 631 aa6.69□□□□□ -1.34
SCN1A-212ENST00000636194 JDP2Q8WYK2 163 aa6.69□□□□□ -1.34
SCN1A-212ENST00000636194 NOP56O00567 594 aaKnown RBP6.68□□□□□ -1.34
SCN1A-212ENST00000636194 MAN1A2O60476 641 aa6.68□□□□□ -1.34
SCN1A-212ENST00000636194 GLRX3O76003 335 aaKnown RBP6.68□□□□□ -1.34
SCN1A-212ENST00000636194 TTC4O95801 387 aa6.68□□□□□ -1.34
SCN1A-212ENST00000636194 CC2D2BQ6DHV5 1058 aa6.68□□□□□ -1.34
SCN1A-212ENST00000636194 JADE1Q6IE81 842 aa6.68□□□□□ -1.34
SCN1A-212ENST00000636194 PDZD4Q76G19 769 aaPredicted RBP6.68□□□□□ -1.34
SCN1A-212ENST00000636194 KIF1BPQ96EK5 621 aa6.68□□□□□ -1.34
SCN1A-212ENST00000636194 ANAPC5Q9UJX4 755 aa6.68□□□□□ -1.34
SCN1A-212ENST00000636194 EFCAB8A8MWE9 144 aa6.68□□□□□ -1.34
SCN1A-212ENST00000636194 PARD3BQ8TEW8 1205 aa6.68□□□□□ -1.34
SCN1A-212ENST00000636194 L3MBTL3Q96JM7 780 aaPredicted RBP6.68□□□□□ -1.34
SCN1A-212ENST00000636194 DDX19AQ9NUU7 478 aaKnown RBP6.68□□□□□ -1.34
SCN1A-212ENST00000636194 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.68□□□□□ -1.34
SCN1A-212ENST00000636194 ENOX1Q8TC92 643 aaKnown RBP6.68□□□□□ -1.34
SCN1A-212ENST00000636194 GBP5Q96PP8 586 aa6.68□□□□□ -1.34
SCN1A-212ENST00000636194 MIS12Q9H081 205 aa6.68□□□□□ -1.34
SCN1A-212ENST00000636194 ZNF530Q6P9A1 599 aaPredicted RBP6.68□□□□□ -1.34
SCN1A-212ENST00000636194 TRIM42Q8IWZ5 723 aa6.68□□□□□ -1.34
SCN1A-212ENST00000636194 TRIM45Q9H8W5 580 aaPredicted RBP6.68□□□□□ -1.34
SCN1A-212ENST00000636194 PRKAG2Q9UGJ0 569 aa6.68□□□□□ -1.34
SCN1A-212ENST00000636194 EXOC7Q9UPT5 735 aa6.68□□□□□ -1.34
SCN1A-212ENST00000636194 SPAG17Q6Q759 2223 aa6.68□□□□□ -1.34
SCN1A-212ENST00000636194 TMEM110-MUSTN1A8MSY1 372 aa6.68□□□□□ -1.34
SCN1A-212ENST00000636194 KRT222Q8N1A0 295 aa6.68□□□□□ -1.34
SCN1A-212ENST00000636194 P3H4Q92791 437 aa6.68□□□□□ -1.34
SCN1A-212ENST00000636194 ZNF428Q96B54 188 aa6.68□□□□□ -1.34
SCN1A-212ENST00000636194 SPINK5Q9NQ38 1064 aaPredicted RBP6.68□□□□□ -1.34
SCN1A-212ENST00000636194 LEO1Q8WVC0 666 aaPredicted RBP6.68□□□□□ -1.34
SCN1A-212ENST00000636194 CNNM2Q9H8M5 875 aa6.68□□□□□ -1.34
SCN1A-212ENST00000636194 DIABLOQ9NR28 239 aa6.68□□□□□ -1.34
SCN1A-212ENST00000636194 ZMYND8Q9ULU4 1186 aaPredicted RBP6.68□□□□□ -1.34
SCN1A-212ENST00000636194 PTPRCP08575 1304 aa6.68□□□□□ -1.34
SCN1A-212ENST00000636194 LRPPRCP42704 1394 aaKnown RBP6.68□□□□□ -1.34
SCN1A-212ENST00000636194 APAF1O14727 1248 aa6.67□□□□□ -1.34
SCN1A-212ENST00000636194 MCM5P33992 734 aa6.67□□□□□ -1.34
SCN1A-212ENST00000636194 STRN3Q13033 797 aa6.67□□□□□ -1.34
SCN1A-212ENST00000636194 TRMT1LQ7Z2T5 733 aaKnown RBP6.67□□□□□ -1.34
SCN1A-212ENST00000636194 ZSCAN30Q86W11 494 aa6.67□□□□□ -1.34
SCN1A-212ENST00000636194 NUDCD3Q8IVD9 361 aa6.67□□□□□ -1.34
SCN1A-212ENST00000636194 SPDL1Q96EA4 605 aa6.67□□□□□ -1.34
SCN1A-212ENST00000636194 GSDMAQ96QA5 445 aa6.67□□□□□ -1.34
SCN1A-212ENST00000636194 CCDC88BA6NC98 1476 aa6.67□□□□□ -1.34
SCN1A-212ENST00000636194 ARHGEF9O43307 516 aa6.67□□□□□ -1.34
SCN1A-212ENST00000636194 MICALL1Q8N3F8 863 aa6.67□□□□□ -1.34
SCN1A-212ENST00000636194 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.67□□□□□ -1.34
SCN1A-212ENST00000636194 ZNF692Q9BU19 519 aaPredicted RBP6.67□□□□□ -1.34
SCN1A-212ENST00000636194 BACH1O14867 736 aa6.67□□□□□ -1.34
SCN1A-212ENST00000636194 EPB41P11171 864 aaKnown RBP6.67□□□□□ -1.34
SCN1A-212ENST00000636194 KRT5P13647 590 aa6.67□□□□□ -1.34
SCN1A-212ENST00000636194 KCNA4P22459 653 aa6.67□□□□□ -1.34
SCN1A-212ENST00000636194 KIF22Q14807 665 aa6.67□□□□□ -1.34
SCN1A-212ENST00000636194 PHLDB3Q6NSJ2 640 aa6.67□□□□□ -1.34
SCN1A-212ENST00000636194 PPP1R42Q7Z4L9 355 aa6.67□□□□□ -1.34
SCN1A-212ENST00000636194 THEMISQ8N1K5 641 aaPredicted RBP6.67□□□□□ -1.34
SCN1A-212ENST00000636194 CEP19Q96LK0 163 aa6.67□□□□□ -1.34
SCN1A-212ENST00000636194 FBXO2Q9UK22 296 aaPredicted RBP6.67□□□□□ -1.34
SCN1A-212ENST00000636194 IFT20Q8IY31 132 aa6.67□□□□□ -1.34
SCN1A-212ENST00000636194 ARHGEF1Q92888 912 aaKnown RBP6.67□□□□□ -1.34
SCN1A-212ENST00000636194 CLSTN2Q9H4D0 955 aa6.67□□□□□ -1.34
SCN1A-212ENST00000636194 OLA1Q9NTK5 396 aaKnown RBP6.67□□□□□ -1.34
SCN1A-212ENST00000636194 SLC4A2P04920 1241 aa6.67□□□□□ -1.34
SCN1A-212ENST00000636194 PPP1R2P41236 205 aa6.67□□□□□ -1.34
SCN1A-212ENST00000636194 DNM2P50570 870 aa6.67□□□□□ -1.34
SCN1A-212ENST00000636194 FAM160A1Q05DH4 1040 aa6.67□□□□□ -1.34
SCN1A-212ENST00000636194 TMEM57Q8N5G2 664 aa6.67□□□□□ -1.34
SCN1A-212ENST00000636194 FAM76AQ8TAV0 307 aa6.67□□□□□ -1.34
SCN1A-212ENST00000636194 GLT8D2Q9H1C3 349 aa6.67□□□□□ -1.34
SCN1A-212ENST00000636194 ESRRGP62508 458 aa6.67□□□□□ -1.34
SCN1A-212ENST00000636194 DUSP27Q5VZP5 1158 aa6.67□□□□□ -1.34
SCN1A-212ENST00000636194 NBPF11Q86T75 865 aa6.67□□□□□ -1.34
SCN1A-212ENST00000636194 UBLCP1Q8WVY7 318 aaPredicted RBP6.67□□□□□ -1.34
SCN1A-212ENST00000636194 TEX13AQ9BXU3 409 aaPredicted RBP6.67□□□□□ -1.34
SCN1A-212ENST00000636194 ZNF212Q9UDV6 495 aa6.67□□□□□ -1.34
SCN1A-212ENST00000636194 RFC4P35249 363 aa6.67□□□□□ -1.34
SCN1A-212ENST00000636194 WASHC5Q12768 1159 aa6.67□□□□□ -1.34
SCN1A-212ENST00000636194 TWISTNBQ3B726 338 aaPredicted RBP6.67□□□□□ -1.34
SCN1A-212ENST00000636194 RILPQ96NA2 401 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms