RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 DENND2AQ9ULE3 1009 aa18.39■□□□□ 0.53
CLN8-209ENST00000635970 SAMD7Q7Z3H4 446 aa18.39■□□□□ 0.53
CLN8-209ENST00000635970 TRPM4Q8TD43 1214 aa18.39■□□□□ 0.53
CLN8-209ENST00000635970 HMG20BQ9P0W2 317 aa18.39■□□□□ 0.53
CLN8-209ENST00000635970 SEMA3EO15041 775 aa18.38■□□□□ 0.53
CLN8-209ENST00000635970 USP17L8P0C7I0 530 aa18.38■□□□□ 0.53
CLN8-209ENST00000635970 EAPPQ56P03 285 aaPredicted RBP18.38■□□□□ 0.53
CLN8-209ENST00000635970 OTUD7AQ8TE49 926 aaPredicted RBP18.38■□□□□ 0.53
CLN8-209ENST00000635970 TMX3Q96JJ7 454 aa18.38■□□□□ 0.53
CLN8-209ENST00000635970 SNRKQ9NRH2 765 aa18.38■□□□□ 0.53
CLN8-209ENST00000635970 NDUFB9Q9Y6M9 179 aa18.38■□□□□ 0.53
CLN8-209ENST00000635970 TBC1D10BQ4KMP7 808 aaPredicted RBP18.37■□□□□ 0.53
CLN8-209ENST00000635970 SPATA5Q8NB90 893 aa18.37■□□□□ 0.53
CLN8-209ENST00000635970 PKNOX2Q96KN3 472 aa18.37■□□□□ 0.53
CLN8-209ENST00000635970 ZMYND15Q9H091 742 aa18.37■□□□□ 0.53
CLN8-209ENST00000635970 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.37■□□□□ 0.53
CLN8-209ENST00000635970 TMEM63CQ9P1W3 806 aa18.37■□□□□ 0.53
CLN8-209ENST00000635970 FKBP1AP62942 108 aaKnown RBP18.37■□□□□ 0.53
CLN8-209ENST00000635970 RBM26Q5T8P6 1007 aaKnown RBP18.37■□□□□ 0.53
CLN8-209ENST00000635970 FAM184AQ8NB25 1140 aa18.37■□□□□ 0.53
CLN8-209ENST00000635970 ADARB2Q9NS39 739 aaKnown RBP18.37■□□□□ 0.53
CLN8-209ENST00000635970 ECM29Q5VYK3 1845 aa18.36■□□□□ 0.53
CLN8-209ENST00000635970 H7C1D1 291 aa18.36■□□□□ 0.53
CLN8-209ENST00000635970 DYNC1I1O14576 645 aa18.36■□□□□ 0.53
CLN8-209ENST00000635970 UQCRFS1P1P0C7P4 283 aa18.36■□□□□ 0.53
CLN8-209ENST00000635970 PRDX5P30044 214 aa18.36■□□□□ 0.53
CLN8-209ENST00000635970 NEK4P51957 841 aa18.36■□□□□ 0.53
CLN8-209ENST00000635970 TSHZ3Q63HK5 1081 aa18.36■□□□□ 0.53
CLN8-209ENST00000635970 WDR66Q8TBY9 1149 aa18.36■□□□□ 0.53
CLN8-209ENST00000635970 TBC1D22AQ8WUA7 517 aa18.36■□□□□ 0.53
CLN8-209ENST00000635970 DOCK2Q92608 1830 aa18.36■□□□□ 0.53
CLN8-209ENST00000635970 HIRAP54198 1017 aaPredicted RBP18.35■□□□□ 0.53
CLN8-209ENST00000635970 ZNF280AP59817 542 aaPredicted RBP18.35■□□□□ 0.53
CLN8-209ENST00000635970 UVSSAQ2YD98 709 aa18.35■□□□□ 0.53
CLN8-209ENST00000635970 PCDHAC2Q9Y5I4 1007 aa18.35■□□□□ 0.53
CLN8-209ENST00000635970 PDS5AQ29RF7 1337 aaKnown RBP18.35■□□□□ 0.53
CLN8-209ENST00000635970 MAST2Q6P0Q8 1798 aa18.35■□□□□ 0.53
CLN8-209ENST00000635970 MYH2Q9UKX2 1941 aa18.35■□□□□ 0.53
CLN8-209ENST00000635970 ESYT1Q9BSJ8 1104 aa18.35■□□□□ 0.53
CLN8-209ENST00000635970 MYOZ2Q9NPC6 264 aa18.35■□□□□ 0.53
CLN8-209ENST00000635970 TTF2Q9UNY4 1162 aaKnown RBP18.35■□□□□ 0.53
CLN8-209ENST00000635970 SYCE3A1L190 88 aa18.34■□□□□ 0.53
CLN8-209ENST00000635970 ZBTB22O15209 634 aa18.34■□□□□ 0.53
CLN8-209ENST00000635970 ZAP70P43403 619 aa18.34■□□□□ 0.53
CLN8-209ENST00000635970 KIF4BQ2VIQ3 1234 aa18.34■□□□□ 0.53
CLN8-209ENST00000635970 OGFOD1Q8N543 542 aa18.34■□□□□ 0.53
CLN8-209ENST00000635970 ZNF512BQ96KM6 892 aaPredicted RBP18.34■□□□□ 0.53
CLN8-209ENST00000635970 ABCF2Q9UG63 623 aa18.34■□□□□ 0.53
CLN8-209ENST00000635970 R3HCC1Q9Y3T6 440 aaKnown RBP18.34■□□□□ 0.53
CLN8-209ENST00000635970 AOX1Q06278 1338 aa18.34■□□□□ 0.53
CLN8-209ENST00000635970 SALL3Q9BXA9 1300 aa18.34■□□□□ 0.53
CLN8-209ENST00000635970 SALL1Q9NSC2 1324 aa18.34■□□□□ 0.53
CLN8-209ENST00000635970 POLR2AP24928 1970 aaKnown RBP18.34■□□□□ 0.53
CLN8-209ENST00000635970 TSPY26PQ9H489 355 aa18.33■□□□□ 0.53
CLN8-209ENST00000635970 RBM27Q9P2N5 1060 aaKnown RBP18.33■□□□□ 0.53
CLN8-209ENST00000635970 USP50Q70EL3 339 aaPredicted RBP18.33■□□□□ 0.52
CLN8-209ENST00000635970 ASTN2O75129 1339 aaPredicted RBP18.33■□□□□ 0.52
CLN8-209ENST00000635970 LETM1O95202 739 aaPredicted RBP18.32■□□□□ 0.52
CLN8-209ENST00000635970 SASS6Q6UVJ0 657 aa18.32■□□□□ 0.52
CLN8-209ENST00000635970 PNMA8AQ86V59 439 aaPredicted RBP18.32■□□□□ 0.52
CLN8-209ENST00000635970 STAP2Q9UGK3 403 aa18.32■□□□□ 0.52
CLN8-209ENST00000635970 HDAC9Q9UKV0 1011 aa18.32■□□□□ 0.52
CLN8-209ENST00000635970 BOLA2Q9H3K6 86 aa18.31■□□□□ 0.52
CLN8-209ENST00000635970 CLEC11AQ9Y240 323 aa18.31■□□□□ 0.52
CLN8-209ENST00000635970 LDHBP07195 334 aaKnown RBP18.31■□□□□ 0.52
CLN8-209ENST00000635970 NBPF9Q3BBW0 867 aa18.31■□□□□ 0.52
CLN8-209ENST00000635970 DNAJC2Q99543 621 aaKnown RBP18.31■□□□□ 0.52
CLN8-209ENST00000635970 WDR33Q9C0J8 1336 aaKnown RBP18.31■□□□□ 0.52
CLN8-209ENST00000635970 TOMM70O94826 608 aa18.3■□□□□ 0.52
CLN8-209ENST00000635970 DIXDC1Q155Q3 683 aa18.3■□□□□ 0.52
CLN8-209ENST00000635970 CFAP100Q494V2 611 aa18.3■□□□□ 0.52
CLN8-209ENST00000635970 LDHDQ86WU2 507 aa18.3■□□□□ 0.52
CLN8-209ENST00000635970 EDC3Q96F86 508 aaKnown RBP18.3■□□□□ 0.52
CLN8-209ENST00000635970 PIH1D3Q9NQM4 214 aaKnown RBP18.3■□□□□ 0.52
CLN8-209ENST00000635970 ECHDC1Q9NTX5 307 aa18.3■□□□□ 0.52
CLN8-209ENST00000635970 MYH7P12883 1935 aa18.3■□□□□ 0.52
CLN8-209ENST00000635970 WNT10BO00744 389 aa18.3■□□□□ 0.52
CLN8-209ENST00000635970 MX1P20591 662 aa18.3■□□□□ 0.52
CLN8-209ENST00000635970 CRKP46108 304 aa18.3■□□□□ 0.52
CLN8-209ENST00000635970 RBM5P52756 815 aaKnown RBP eCLIP18.3■□□□□ 0.52
CLN8-209ENST00000635970 TMEM87AQ8NBN3 555 aa18.3■□□□□ 0.52
CLN8-209ENST00000635970 SUGT1Q9Y2Z0 365 aa18.3■□□□□ 0.52
CLN8-209ENST00000635970 UQCRHLA0A096LP55 91 aa18.29■□□□□ 0.52
CLN8-209ENST00000635970 UQCRHP07919 91 aa18.29■□□□□ 0.52
CLN8-209ENST00000635970 ATP5JP18859 108 aa18.29■□□□□ 0.52
CLN8-209ENST00000635970 MAP1SQ66K74 1059 aaPredicted RBP18.29■□□□□ 0.52
CLN8-209ENST00000635970 ZNF384Q8TF68 577 aa18.29■□□□□ 0.52
CLN8-209ENST00000635970 SCAF8Q9UPN6 1271 aaKnown RBP18.29■□□□□ 0.52
CLN8-209ENST00000635970 CHMLP26374 656 aa18.28■□□□□ 0.52
CLN8-209ENST00000635970 DLGAP5Q15398 846 aa18.28■□□□□ 0.52
CLN8-209ENST00000635970 DZIP1Q86YF9 867 aaKnown RBP18.28■□□□□ 0.52
CLN8-209ENST00000635970 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.28■□□□□ 0.52
CLN8-209ENST00000635970 ZBED3Q96IU2 234 aaPredicted RBP18.28■□□□□ 0.52
CLN8-209ENST00000635970 PRMT6Q96LA8 375 aaPredicted RBP18.28■□□□□ 0.52
CLN8-209ENST00000635970 GGA3Q9NZ52 723 aa18.28■□□□□ 0.52
CLN8-209ENST00000635970 SERPINA10Q9UK55 444 aa18.28■□□□□ 0.52
CLN8-209ENST00000635970 GOLIM4O00461 696 aa18.28■□□□□ 0.52
CLN8-209ENST00000635970 MECOMQ03112 1051 aa18.28■□□□□ 0.52
CLN8-209ENST00000635970 TEKT1Q969V4 418 aa18.28■□□□□ 0.52
CLN8-209ENST00000635970 GPATCH3Q96I76 525 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms